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The map label for this gene is cyoC [H]

Identifier: 262192874

GI number: 262192874

Start: 193844

End: 194452

Strand: Direct

Name: cyoC [H]

Synonym: BMA10247_A0227

Alternate gene names: 262192874

Gene position: 193844-194452 (Clockwise)

Preceding gene: 126445747

Following gene: 126446731

Centisome position: 8.24

GC content: 67.16

Gene sequence:

>609_bases
ATGTCGTACCCATCCGTGAGCGCCGCGCCTCGTCACGCCGCGCACGATCATCCGCCGTCGCATTCGGTGTTCGGCTTCTG
GCTGTATCTGATGACCGACTGCGTGATCTTCGCCGCGCTGTTCGCCGTGTTCGCGGTGATGGCGCATCAATTCGCGGGCG
GCCCGACCGCGGTCGATCTGTTCGACATCCCGGGCGTCGCGCTCGAGACCGCGCTGCTGCTCGTGAGCAGCATCACGTAC
GGCTTCGCGATGATCGGCGCGCAGCGCGGCCGCCGCGGCGCGTTGTTCGGCTGGCTCGCGGTGACGTTCGTGCTCGGCGC
GGCGTTTCTCGGCCTCGAACTGCGCGAGTTCTCGCAGATGATCGCGGAGGGCGCGGGCCCGCAGCGCAGCGCGTTCCTGT
CGTCGTTCTTCACGCTCGTCGGCACGCATGGGCTGCATGTCGCGATCGGTCTCCTGTGGATGGCCGTGCTCGCGTGCCAG
GCGCTGCGCCGCCCGGCGCTGACCGAGCGCGATATCCGCCGCCTGACGTGCCTGAGCCTCTTCTGGCACTTCCTCGACAT
CGTCTGGATCTGCGTCTTTTCCTTCGTTTATCTCGCGAGCGTGATCTGA

Upstream 100 bases:

>100_bases
GCTATTACATTCCGGCCGACGCCGTGCGCAGGATCGAGGAAAAACGCGGCGGCGCGCGTTTCGTCGCGCGGCCGGCGCAA
GTCGAACTGGAGGCAAACTG

Downstream 100 bases:

>100_bases
ATGGCCGATATGCATCTCTCCCACGACGGCGAAGCGCACGGCACCGTCGGCGGCTACCTCGCCGGTTTCATTCTGTCGGT
GCTGCTCACGGCCGCGTCGT

Product: ubiquinol oxidase, subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSYPSVSAAPRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALETALLLVSSITY
GFAMIGAQRGRRGALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQRSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQ
ALRRPALTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI

Sequences:

>Translated_202_residues
MSYPSVSAAPRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALETALLLVSSITY
GFAMIGAQRGRRGALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQRSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQ
ALRRPALTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI
>Mature_201_residues
SYPSVSAAPRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDLFDIPGVALETALLLVSSITYG
FAMIGAQRGRRGALFGWLAVTFVLGAAFLGLELREFSQMIAEGAGPQRSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQA
LRRPALTERDIRRLTCLSLFWHFLDIVWICVFSFVYLASVI

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=190, Percent_Identity=54.7368421052632, Blast_Score=216, Evalue=1e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 22071; Mature: 21940

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPSVSAAPRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
FDIPGVALETALLLVSSITYGFAMIGAQRGRRGALFGWLAVTFVLGAAFLGLELREFSQM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEGAGPQRSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSL
HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FWHFLDIVWICVFSFVYLASVI
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SYPSVSAAPRHAAHDHPPSHSVFGFWLYLMTDCVIFAALFAVFAVMAHQFAGGPTAVDL
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEH
FDIPGVALETALLLVSSITYGFAMIGAQRGRRGALFGWLAVTFVLGAAFLGLELREFSQM
HCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAEGAGPQRSAFLSSFFTLVGTHGLHVAIGLLWMAVLACQALRRPALTERDIRRLTCLSL
HHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
FWHFLDIVWICVFSFVYLASVI
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]