| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
Click here to switch to the map view.
The map label for this gene is treA [H]
Identifier: 262192855
GI number: 262192855
Start: 1490355
End: 1492178
Strand: Reverse
Name: treA [H]
Synonym: BMA10247_A1543
Alternate gene names: 262192855
Gene position: 1492178-1490355 (Counterclockwise)
Preceding gene: 126445884
Following gene: 126447831
Centisome position: 63.42
GC content: 67.71
Gene sequence:
>1824_bases TTGCCTGAGCGCCGGTTTTCGTGCGAATCTGCCGCCGCGGCATACGACAGACAAACACGCCGCCACGCGTCGGGCCCGCG CGATCAGGAGACCGTATTGCCGTTCATCTCGAAAACGGGAGGAGGAGATATGGTCACGCCGCGGCATCGCCCGCTTCATG TTGAAAATCCGTTCTATCGTCGCCTGCTGAACGCGCCCGCGTGGGTCGCGCTCGTCGCCGCGGCCGGCATCGGCTGCACG AGCGCGACGCTCGCCCGCGCCGATTCGTCGCCGGCGCACGCGTCCACGGCCGCGGCCGTGGCGAGCGCCGCATCCGCGCC GGGCGCCGCGTCGATTCCGCCGCCGCCGAGCCAGCTCTACGGCGATCTCTTTGTTGCGGTGCAAACCGCGCAGATCTTCG CGGATCAGAAGACCTTCGTCGATTCGACGCCGAACGCCGATCCCGCGACGATCGTCCAGCTGTACCAGCAGCAGAAGGGC CAGCCGGGCTTCTCGCTGAAGGCGTTCGTCGCGCAATACTTCACGCCGCCGTCGGACGAATCGGTGACGCCGCCGCCGAA CCAGACGCTGCGCGAGCACATCGACTGGCTATGGCCGAAGCTCACGCGCACCACCACGACGGCGCCGCCGTACAGCTCGC TGATTGCGCTGCCCAAACCGTACGTGGTGCCGGGCGGGCGCTTCCGCGAAGGCTACTACTGGGACACGTACTTCACGATG CTCGGCTTGCAGGAGGCGGGCCGGGAAGATCTCGTCGACAACATGCTCGACAACTTCGCGTACCTGATCGACACCGTCGG CCACGTGCCGAACGGCAACCGCAGCTATTACGTGAGCCGCTCGCAGCCGCCGTTCTTCGCGTACATGGTGACGCTCGCGG CGAAGGCCGAGGGCAATCGCGTCTATCAGAAGTACCTGCCCGCGCTGCGCAAGGAGTACGCGTACTGGATGCAGGGCGAG CGCACCACGCCGCGCGGCCAGGCGACGCGCAACGTCGTCGCGATGCCGGACGGCTCGGTGCTGAACCGCTACTGGGACGC GAGCGACACGCCGCGCGACGAGTCGTATCTCGAAGACGTGAAGACCGCGCAGCAGGCGAGCGGCCGGCCGGCGGCGGAAG TCTGGCGCGATCTGCGCGCGGCGGCGGAGAGCGGCTGGGATTTCAGCTCGCGCTGGTTCGGCGACAACCGCACGCTCGCG ACGATCCGCACGACCGCGATCGTGCCCGTCGACTTGAACAGCCTGATGTTCAACCTCGAGACGACGATCGTGAAGGGCTG CGCGGTGACGCGCGATTTCGCGTGCGTCGCCGAGTTCGCCGGCCGCGCGGGCAAGCGCGCGGTTGCGATCAACCGCTATC TGTGGAACCGCAACGGCTATTACGGCGACTACGACTGGAAACTCGGCAAGCCGCGCGACAACCTGTCGGCGGCGGCGTTG TATCCGCTGTTCGCGGGCGTCGCGTGGCCGGAGCGCGCGAAGCAGACCGCGAAGAACGTGCAGAAAGCGCTGCTCAAGCC GGGCGGGCTCGCGACGACGACTTACGACACCGCGCAGCAGTGGGACGCACCTAACGGCTGGGCGCCGCTGCACTGGATCG CGCTCGTCGGGCTGCGGCACTATGGCGAGAAGTCGCTCGCGGACGATATCGGCACGCGTTTTCTTGCCGACGTGAAGGGC GTGTACGCGGCGCAGGGCAAGCTCGTCGAGAAGTACATCGTCGAAGGCACGGGCGGCGGCGGCGGCGGCGAGTATCCGCT GCAGGACGGCTTCGGCTGGACCAACGGCGTGACGCTCAAGCTGCTCGATCTGTACGGCGGCTGA
Upstream 100 bases:
>100_bases GGCTTCCCCGGGGGCCGCGTGCCTCGTGCGCGCCGGCGCGTGCGCGACGCGCCGCATGCCGCGGCCCACGGTCATTTGCG CGAAGTGTGGGAAGAACCGC
Downstream 100 bases:
>100_bases CGCGCGCGCATCGCGCCGCGCACGCGGGCGGCGCATGCCCGCCCGCGTGCGCGGCGTTGGCCGTTCGCGACGTTGCGTTA TTGAGGCCGGGAATAAGCGT
Product: trehalase
Products: NA
Alternate protein names: Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase [H]
Number of amino acids: Translated: 607; Mature: 606
Protein sequence:
>607_residues MPERRFSCESAAAAYDRQTRRHASGPRDQETVLPFISKTGGGDMVTPRHRPLHVENPFYRRLLNAPAWVALVAAAGIGCT SATLARADSSPAHASTAAAVASAASAPGAASIPPPPSQLYGDLFVAVQTAQIFADQKTFVDSTPNADPATIVQLYQQQKG QPGFSLKAFVAQYFTPPSDESVTPPPNQTLREHIDWLWPKLTRTTTTAPPYSSLIALPKPYVVPGGRFREGYYWDTYFTM LGLQEAGREDLVDNMLDNFAYLIDTVGHVPNGNRSYYVSRSQPPFFAYMVTLAAKAEGNRVYQKYLPALRKEYAYWMQGE RTTPRGQATRNVVAMPDGSVLNRYWDASDTPRDESYLEDVKTAQQASGRPAAEVWRDLRAAAESGWDFSSRWFGDNRTLA TIRTTAIVPVDLNSLMFNLETTIVKGCAVTRDFACVAEFAGRAGKRAVAINRYLWNRNGYYGDYDWKLGKPRDNLSAAAL YPLFAGVAWPERAKQTAKNVQKALLKPGGLATTTYDTAQQWDAPNGWAPLHWIALVGLRHYGEKSLADDIGTRFLADVKG VYAAQGKLVEKYIVEGTGGGGGGEYPLQDGFGWTNGVTLKLLDLYGG
Sequences:
>Translated_607_residues MPERRFSCESAAAAYDRQTRRHASGPRDQETVLPFISKTGGGDMVTPRHRPLHVENPFYRRLLNAPAWVALVAAAGIGCT SATLARADSSPAHASTAAAVASAASAPGAASIPPPPSQLYGDLFVAVQTAQIFADQKTFVDSTPNADPATIVQLYQQQKG QPGFSLKAFVAQYFTPPSDESVTPPPNQTLREHIDWLWPKLTRTTTTAPPYSSLIALPKPYVVPGGRFREGYYWDTYFTM LGLQEAGREDLVDNMLDNFAYLIDTVGHVPNGNRSYYVSRSQPPFFAYMVTLAAKAEGNRVYQKYLPALRKEYAYWMQGE RTTPRGQATRNVVAMPDGSVLNRYWDASDTPRDESYLEDVKTAQQASGRPAAEVWRDLRAAAESGWDFSSRWFGDNRTLA TIRTTAIVPVDLNSLMFNLETTIVKGCAVTRDFACVAEFAGRAGKRAVAINRYLWNRNGYYGDYDWKLGKPRDNLSAAAL YPLFAGVAWPERAKQTAKNVQKALLKPGGLATTTYDTAQQWDAPNGWAPLHWIALVGLRHYGEKSLADDIGTRFLADVKG VYAAQGKLVEKYIVEGTGGGGGGEYPLQDGFGWTNGVTLKLLDLYGG >Mature_606_residues PERRFSCESAAAAYDRQTRRHASGPRDQETVLPFISKTGGGDMVTPRHRPLHVENPFYRRLLNAPAWVALVAAAGIGCTS ATLARADSSPAHASTAAAVASAASAPGAASIPPPPSQLYGDLFVAVQTAQIFADQKTFVDSTPNADPATIVQLYQQQKGQ PGFSLKAFVAQYFTPPSDESVTPPPNQTLREHIDWLWPKLTRTTTTAPPYSSLIALPKPYVVPGGRFREGYYWDTYFTML GLQEAGREDLVDNMLDNFAYLIDTVGHVPNGNRSYYVSRSQPPFFAYMVTLAAKAEGNRVYQKYLPALRKEYAYWMQGER TTPRGQATRNVVAMPDGSVLNRYWDASDTPRDESYLEDVKTAQQASGRPAAEVWRDLRAAAESGWDFSSRWFGDNRTLAT IRTTAIVPVDLNSLMFNLETTIVKGCAVTRDFACVAEFAGRAGKRAVAINRYLWNRNGYYGDYDWKLGKPRDNLSAAALY PLFAGVAWPERAKQTAKNVQKALLKPGGLATTTYDTAQQWDAPNGWAPLHWIALVGLRHYGEKSLADDIGTRFLADVKGV YAAQGKLVEKYIVEGTGGGGGGEYPLQDGFGWTNGVTLKLLDLYGG
Specific function: Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system [H]
COG id: COG1626
COG function: function code G; Neutral trehalase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 37 family [H]
Homologues:
Organism=Homo sapiens, GI116284412, Length=534, Percent_Identity=33.7078651685393, Blast_Score=246, Evalue=7e-65, Organism=Escherichia coli, GI1787447, Length=542, Percent_Identity=52.2140221402214, Blast_Score=551, Evalue=1e-158, Organism=Escherichia coli, GI1789936, Length=500, Percent_Identity=52.8, Blast_Score=509, Evalue=1e-145, Organism=Caenorhabditis elegans, GI17542196, Length=534, Percent_Identity=31.6479400749064, Blast_Score=252, Evalue=4e-67, Organism=Caenorhabditis elegans, GI17565078, Length=517, Percent_Identity=32.495164410058, Blast_Score=239, Evalue=4e-63, Organism=Caenorhabditis elegans, GI25141398, Length=546, Percent_Identity=32.2344322344322, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI25148109, Length=530, Percent_Identity=32.0754716981132, Blast_Score=232, Evalue=5e-61, Organism=Caenorhabditis elegans, GI71987755, Length=429, Percent_Identity=31.2354312354312, Blast_Score=193, Evalue=2e-49, Organism=Saccharomyces cerevisiae, GI6320204, Length=426, Percent_Identity=30.2816901408451, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319473, Length=434, Percent_Identity=29.9539170506912, Blast_Score=140, Evalue=5e-34, Organism=Drosophila melanogaster, GI24656661, Length=532, Percent_Identity=32.1428571428571, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI17933716, Length=532, Percent_Identity=32.1428571428571, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24656670, Length=532, Percent_Identity=32.1428571428571, Blast_Score=236, Evalue=4e-62, Organism=Drosophila melanogaster, GI24656680, Length=532, Percent_Identity=32.1428571428571, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24656675, Length=532, Percent_Identity=32.1428571428571, Blast_Score=235, Evalue=5e-62, Organism=Drosophila melanogaster, GI24656685, Length=480, Percent_Identity=31.875, Blast_Score=216, Evalue=3e-56, Organism=Drosophila melanogaster, GI22024178, Length=534, Percent_Identity=28.4644194756554, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI45551104, Length=373, Percent_Identity=30.0268096514745, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI28573474, Length=298, Percent_Identity=26.8456375838926, Blast_Score=108, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR001661 - InterPro: IPR018232 [H]
Pfam domain/function: PF01204 Trehalase [H]
EC number: =3.2.1.28 [H]
Molecular weight: Translated: 66660; Mature: 66529
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS00927 TREHALASE_1 ; PS00928 TREHALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERRFSCESAAAAYDRQTRRHASGPRDQETVLPFISKTGGGDMVTPRHRPLHVENPFYR CCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCHHHH RLLNAPAWVALVAAAGIGCTSATLARADSSPAHASTAAAVASAASAPGAASIPPPPSQLY HHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH GDLFVAVQTAQIFADQKTFVDSTPNADPATIVQLYQQQKGQPGFSLKAFVAQYFTPPSDE HHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC SVTPPPNQTLREHIDWLWPKLTRTTTTAPPYSSLIALPKPYVVPGGRFREGYYWDTYFTM CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCCCCEEHHHHHHH LGLQEAGREDLVDNMLDNFAYLIDTVGHVPNGNRSYYVSRSQPPFFAYMVTLAAKAEGNR HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCH VYQKYLPALRKEYAYWMQGERTTPRGQATRNVVAMPDGSVLNRYWDASDTPRDESYLEDV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCHHHHHHH KTAQQASGRPAAEVWRDLRAAAESGWDFSSRWFGDNRTLATIRTTAIVPVDLNSLMFNLE HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHH TTIVKGCAVTRDFACVAEFAGRAGKRAVAINRYLWNRNGYYGDYDWKLGKPRDNLSAAAL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHH YPLFAGVAWPERAKQTAKNVQKALLKPGGLATTTYDTAQQWDAPNGWAPLHWIALVGLRH HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHH YGEKSLADDIGTRFLADVKGVYAAQGKLVEKYIVEGTGGGGGGEYPLQDGFGWTNGVTLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEE LLDLYGG EEEECCC >Mature Secondary Structure PERRFSCESAAAAYDRQTRRHASGPRDQETVLPFISKTGGGDMVTPRHRPLHVENPFYR CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEECCCHHHH RLLNAPAWVALVAAAGIGCTSATLARADSSPAHASTAAAVASAASAPGAASIPPPPSQLY HHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHH GDLFVAVQTAQIFADQKTFVDSTPNADPATIVQLYQQQKGQPGFSLKAFVAQYFTPPSDE HHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCC SVTPPPNQTLREHIDWLWPKLTRTTTTAPPYSSLIALPKPYVVPGGRFREGYYWDTYFTM CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCEECCCCCCCCCEEHHHHHHH LGLQEAGREDLVDNMLDNFAYLIDTVGHVPNGNRSYYVSRSQPPFFAYMVTLAAKAEGNR HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCH VYQKYLPALRKEYAYWMQGERTTPRGQATRNVVAMPDGSVLNRYWDASDTPRDESYLEDV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHCCCCCCCCCHHHHHHH KTAQQASGRPAAEVWRDLRAAAESGWDFSSRWFGDNRTLATIRTTAIVPVDLNSLMFNLE HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEEEEEHHHHHHHHH TTIVKGCAVTRDFACVAEFAGRAGKRAVAINRYLWNRNGYYGDYDWKLGKPRDNLSAAAL HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHH YPLFAGVAWPERAKQTAKNVQKALLKPGGLATTTYDTAQQWDAPNGWAPLHWIALVGLRH HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHCCCCCCCCHHHHHHHHHHHH YGEKSLADDIGTRFLADVKGVYAAQGKLVEKYIVEGTGGGGGGEYPLQDGFGWTNGVTLK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCEEE LLDLYGG EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]