| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
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The map label for this gene is rho
Identifier: 261876159
GI number:
Start: 2740270
End: 2741739
Strand: Reverse
Name: rho
Synonym: CPF_2471
Alternate gene names: NA
Gene position: NA
Preceding gene: 110800874
Following gene: 110800423
Centisome position: NA
GC content: NA
Gene sequence:
>1470_bases GTGCTTAAATTGAATATAGAACAATATGAAAATATGACTTTAGTTCAGCTAAAAGAGCAGGCTAAAGAATTAGGAATAAA AAATATAAGTAAAAAGAAAAAAAGCGAATTAATTGAGGAATTAAAAGCTGAATTCAATAAACAAAATAGCAATACTAAAG TAATACATAAAGATGGTGTTATTTTAAGAGAAAAAATATCTCAAAAAGAGCAAGGTGGAAATAAAGAAAGTTTTTCTGGT GAAAGAGTAGTTAGAAATAGCAATAATTATAATAACAATAATAGTAATTATAATAATTCAAATGATGAAGGAAAAAAAGA GCAATTAAAGGACATGATAAGTTCATCAGACTCTGCTAAGGGAATACTTGAAATACTAGATAATAATAATTTTGGTTTTT TAAGATGTAGAAATTATTTAACAAGTGAAGATGATATATATGTTTCTCCATCACAAATAAGAAGATTTGGATTAAGAACT GGGGACGAAGTCCAAGGTAAAGTTAGAATACCAAAGGATGGAGAAAAGTTTAAAGCTTTACTTTATGTAGAGAGAGTAAA TGGTGAAAGTCCTGAAAAAGCAGTTGGAAGAAAAAAATTTGAAGAGTTAACACCAATATATCCAAAAGAGAGATTAAGAC TTGAGACTGAAAATGGAAGAGATTTAAGTTCAAGACTTATGGATATAATTTGTCCAATAGGTAAGGGACAAAGGGGGATG ATAGTTGCACCACCTAAGGCTGGAAAAACAACTCTTTTAAAAAGAATAGCTCAAAACATATCAAAAAATAATCCTGAAGT TAAACTTATAGTACTTTTAATAGATGAAAGACCAGAAGAAGTAACGGATATGAAGAGAAGTATAGATGGAGAAGTAATCT ATTCAACTTTTGATGAAGAACCACAAAACCATGCTAAAGTTTCAAGTATAGTATTAGAAAGAGCTAAAAGAATGGTTGAA CAAGGAAGAGATGTAGTTATCTTAATGGATTCTTTAACAAGATTATCAAGAGCCTATAACTTAACAGTTACTCCATCTGG AAGAACTTTATCAGGGGGACTAGATCCAGGGGCACTTATAATGCCTAAGAAATTCTTTGGAGCAGCTAGAAATTTAGAAG AGGGCGGAAGTTTAACAATTTTAGCAACTTCTTTAGTTGATACAGGAAGTAGAATGGATGATATGATTTTTGAAGAGTTT AAGGGTACTGGAAATATGGAGGTACACTTAGATAGAAAGCTTCAAGAGAGAAGAATATTCCCAGCTATAGATATTTATAA ATCTGGTACTAGAAAAGAAGATTTATTATTTAATGAAGAAGAAAGAGAAGCTTCATATAAAATAAGAAGAGTATTACAAA AGGAAAATAATATAGAGGATGTAGCTGAAAAGCTTATAAATTTATTATCAAAAACAAAAAATAATAAAGAGTTTTTACAA GTTGTTTTAAAAAGCAATTTAGAAAATTAA
Upstream 100 bases:
>100_bases ATTTTTAAATAGGATATTCGAAAGTTTCTATATATAAAAGTCTTAAGGCAATCTAAAACAACTTTTCTTTACCTTATTCC ACTAATTAAAAAAGCAGGAG
Downstream 100 bases:
>100_bases ATAAGTTTTCAAAACAAAAGAAGATATTAAAGTCTATAAACTTTAATATCTTCTTTTATTATAAGAATCATTTAGCATCT TAGTGCAAAGTTTAATTGTC
Product: transcription termination factor Rho
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>489_residues MLKLNIEQYENMTLVQLKEQAKELGIKNISKKKKSELIEELKAEFNKQNSNTKVIHKDGVILREKISQKEQGGNKESFSG ERVVRNSNNYNNNNSNYNNSNDEGKKEQLKDMISSSDSAKGILEILDNNNFGFLRCRNYLTSEDDIYVSPSQIRRFGLRT GDEVQGKVRIPKDGEKFKALLYVERVNGESPEKAVGRKKFEELTPIYPKERLRLETENGRDLSSRLMDIICPIGKGQRGM IVAPPKAGKTTLLKRIAQNISKNNPEVKLIVLLIDERPEEVTDMKRSIDGEVIYSTFDEEPQNHAKVSSIVLERAKRMVE QGRDVVILMDSLTRLSRAYNLTVTPSGRTLSGGLDPGALIMPKKFFGAARNLEEGGSLTILATSLVDTGSRMDDMIFEEF KGTGNMEVHLDRKLQERRIFPAIDIYKSGTRKEDLLFNEEEREASYKIRRVLQKENNIEDVAEKLINLLSKTKNNKEFLQ VVLKSNLEN
Sequences:
NA
Specific function: NA
COG id: COG1158
COG function: function code K; Transcription termination factor
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA