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The map label for this gene is 258676994

Identifier: 258676994

GI number: 258676994

Start: 2116826

End: 2117269

Strand: Reverse

Name: 258676994

Synonym: CLC_1991

Alternate gene names: NA

Gene position: 2117269-2116826 (Counterclockwise)

Preceding gene: 153935596

Following gene: 153935026

Centisome position: 56.3

GC content: 28.15

Gene sequence:

>444_bases
ATGATAAAGGAAAGAAGTGACTTAAAGTTCTTATTTTTAACTAAAAGAATAGATAGATTTAGATATTGTATTCCTGAAGA
TTGGAATGATGGCTACGAAAATGTTATTATATGCTGCACTATAGAAAATCAGAAAAATGCTGATTATAAATTATCTATTT
TTAAAGATTTGCCTATAAAGCATAAATGTATAACAGCTCAGCCGTTATTAGAAAAAGTAAATATTGAAAAGTATTTAAAA
GATATTGAGCTTGTTGTGGTTGGTGGAGAATCTGATAATAATGTGAGAACATTAGATTATGACTGGGCACTTGACATAAG
GAATCAGTGTGTAAAGGCAAATGTTAACTTTGAATTTAGACAGTGTGGAACACATTTTATAAAAGATGGTAAGTTGTATA
ATTTGCAAGTAAAGGATTTGTGTAAGCAAAATTGGCAAATATAA

Upstream 100 bases:

>100_bases
AGAAAATTCAAATAAAATAAAATCAGGTACAGTATATCTATGTTTTTCGTCAGATTTCTTTATTGAAGAAGCAGATGCTT
GGAGAGATAAATGTTGGAAA

Downstream 100 bases:

>100_bases
ATTATAATATTTAGCCATATAAATCCCAATTTGTTTGATTGAACAAAACGAGCATAATATCTGACTAAATTAATATATGT
GTTAGTGCAACAGTTCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Gp37Gp68 Family Protein; Gp37gp68 Family Protein; Bacteriophage Protein Gp; LOW QUALITY PROTEIN Claudin Tight Junction Protein; Claudin Tight Junction Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MIKERSDLKFLFLTKRIDRFRYCIPEDWNDGYENVIICCTIENQKNADYKLSIFKDLPIKHKCITAQPLLEKVNIEKYLK
DIELVVVGGESDNNVRTLDYDWALDIRNQCVKANVNFEFRQCGTHFIKDGKLYNLQVKDLCKQNWQI

Sequences:

>Translated_147_residues
MIKERSDLKFLFLTKRIDRFRYCIPEDWNDGYENVIICCTIENQKNADYKLSIFKDLPIKHKCITAQPLLEKVNIEKYLK
DIELVVVGGESDNNVRTLDYDWALDIRNQCVKANVNFEFRQCGTHFIKDGKLYNLQVKDLCKQNWQI
>Mature_147_residues
MIKERSDLKFLFLTKRIDRFRYCIPEDWNDGYENVIICCTIENQKNADYKLSIFKDLPIKHKCITAQPLLEKVNIEKYLK
DIELVVVGGESDNNVRTLDYDWALDIRNQCVKANVNFEFRQCGTHFIKDGKLYNLQVKDLCKQNWQI

Specific function: Unknown

COG id: COG4422

COG function: function code S; Bacteriophage protein gp37

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17470; Mature: 17470

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKERSDLKFLFLTKRIDRFRYCIPEDWNDGYENVIICCTIENQKNADYKLSIFKDLPIK
CCCCCCCCEEEEEHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC
HKCITAQPLLEKVNIEKYLKDIELVVVGGESDNNVRTLDYDWALDIRNQCVKANVNFEFR
CEEECHHHHHHHCCHHHHHCCEEEEEECCCCCCCEEEEEEEEEECCCCCEEEECCCEEHH
QCGTHFIKDGKLYNLQVKDLCKQNWQI
HCCHHHCCCCEEEEEEHHHHHHCCCCC
>Mature Secondary Structure
MIKERSDLKFLFLTKRIDRFRYCIPEDWNDGYENVIICCTIENQKNADYKLSIFKDLPIK
CCCCCCCCEEEEEHHHHHHHEECCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCC
HKCITAQPLLEKVNIEKYLKDIELVVVGGESDNNVRTLDYDWALDIRNQCVKANVNFEFR
CEEECHHHHHHHCCHHHHHCCEEEEEECCCCCCCEEEEEEEEEECCCCCEEEECCCEEHH
QCGTHFIKDGKLYNLQVKDLCKQNWQI
HCCHHHCCCCEEEEEEHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA