| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 257168079
Identifier: 257168079
GI number: 257168079
Start: 2612152
End: 2612673
Strand: Reverse
Name: 257168079
Synonym: y2368
Alternate gene names: NA
Gene position: 2612673-2612152 (Counterclockwise)
Preceding gene: 22126254
Following gene: 22126251
Centisome position: 56.79
GC content: 45.4
Gene sequence:
>522_bases ATGAAGAAAACAATTATTGCCAGCAGTATTATTGCCAGTATTTTTGCCGCACCTGCTGCTTTGGCGTTTAAAGAATATCC TGCAGGCGAGCCTATCAAAATTAACGATATGGAAATTGCTGCTGTTTATTTACAACCGATTGATATGGAGCCGCGTGGGA TGGGTTTACCTGCGGCAAAAGCTGATATCCACCTGGAAGCGGATATTCACGCCACCGAAGGTAATAAAAATGGCTTCGGT GCAGGTGAATGGATACCGTACCTAACCATCGCTTATACGTTGGTCAATACCGATACTGGCGATAAACAGGAAGGGACATT CATGCCGATGGTTGCCAGTGATGGCCCGCACTACGGCGCAAATATTAAAATGATGGGGGTGGGTAACTATAAAGTCACTT ATCACATCAGCGAACCGTCCAAAGCGGGTTTACATCGTCACACTGACAGTGAAACCGGTGTTGGTCGTTGGTGGAAACCA TTCGATGTGAGCTATGACTTTAAATATGTCGGCTTGAATTGA
Upstream 100 bases:
>100_bases GTTTGCGACGCGAAGCCCTGAATGAGCAGTTTGGCAAAATGCCGCTGCGAATAACGACAACGTAATTATCATTTGATACC AGAGGGTATGTCCTATGACC
Downstream 100 bases:
>100_bases TAACCGTAGCCGTGATAACTGATACACAGCGGTCACGGCATCGTTTTGAACGTTATTGTCATTGAAAATAAAAGTATTGT TTTGAGAAAACATTGTTTTG
Product: periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKKTIIASSIIASIFAAPAALAFKEYPAGEPIKINDMEIAAVYLQPIDMEPRGMGLPAAKADIHLEADIHATEGNKNGFG AGEWIPYLTIAYTLVNTDTGDKQEGTFMPMVASDGPHYGANIKMMGVGNYKVTYHISEPSKAGLHRHTDSETGVGRWWKP FDVSYDFKYVGLN
Sequences:
>Translated_173_residues MKKTIIASSIIASIFAAPAALAFKEYPAGEPIKINDMEIAAVYLQPIDMEPRGMGLPAAKADIHLEADIHATEGNKNGFG AGEWIPYLTIAYTLVNTDTGDKQEGTFMPMVASDGPHYGANIKMMGVGNYKVTYHISEPSKAGLHRHTDSETGVGRWWKP FDVSYDFKYVGLN >Mature_173_residues MKKTIIASSIIASIFAAPAALAFKEYPAGEPIKINDMEIAAVYLQPIDMEPRGMGLPAAKADIHLEADIHATEGNKNGFG AGEWIPYLTIAYTLVNTDTGDKQEGTFMPMVASDGPHYGANIKMMGVGNYKVTYHISEPSKAGLHRHTDSETGVGRWWKP FDVSYDFKYVGLN
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 18868; Mature: 18868
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTIIASSIIASIFAAPAALAFKEYPAGEPIKINDMEIAAVYLQPIDMEPRGMGLPAAK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCC ADIHLEADIHATEGNKNGFGAGEWIPYLTIAYTLVNTDTGDKQEGTFMPMVASDGPHYGA CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCC NIKMMGVGNYKVTYHISEPSKAGLHRHTDSETGVGRWWKPFDVSYDFKYVGLN EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MKKTIIASSIIASIFAAPAALAFKEYPAGEPIKINDMEIAAVYLQPIDMEPRGMGLPAAK CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEEEECCCCCCCCCCCCCC ADIHLEADIHATEGNKNGFGAGEWIPYLTIAYTLVNTDTGDKQEGTFMPMVASDGPHYGA CEEEEEEEEEEECCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCC NIKMMGVGNYKVTYHISEPSKAGLHRHTDSETGVGRWWKPFDVSYDFKYVGLN EEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]