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The map label for this gene is yxaH

Identifier: 255767859

GI number: 255767859

Start: 4104929

End: 4106137

Strand: Reverse

Name: yxaH

Synonym: BSU39970

Alternate gene names: 255767859

Gene position: 4106137-4104929 (Counterclockwise)

Preceding gene: 255767860

Following gene: 255767858

Centisome position: 97.4

GC content: 43.18

Gene sequence:

>1209_bases
ATGTCTTCATTACAGCCGACTTTAACAAATGAGCGGATCGGTGTGCTTGATGTGCTGAGAGGAATGGCGATTTTCGGCAT
CTTATTTGTCAATCTGGCACATTTCAGTTATCCGGATATGTATTTGTCTATGCTTGGAAAAGAGAATTTTTTCATGGATA
AGTGGTCTGAAGCTGATTTTGCCGCCGCAGACATACTGAAATTCTTCATTCAAACAAAATGTATTTTATTGTTTTCCTTT
TTATTTGGATTTGGCATGGTTGTCATGATGGAGAGAGCAGAAAACAAAGGGAAACGGTTTGTTCCGTTATATGTGAGAAG
GTTAATGGCGCTTCTCTTGTTTGGAACGATTCATGCCTTTTTGATATGGGACGGGGATATTTTAACAGAATATGCCCTGC
TCGGATTTGTCCTGCTCTTGTTTCGAAAAGCAAAGCCGAAAACACTGCTGATATGGGCGGTCTCTTTGTATCTTCTGTTT
TCCATTCCGTTCATGTTGACAAGTTTTGATCAATCAAACGGACAGGAATGGGTACAAGCGGTAACACAGCAGGCAAAACA
AGCGATTCATGTTTATGGAAGCGGCAGCCTGAAGGATATTGCAGAACAGCGGATCCACGACCGTCTTGTTTACATGTCTT
CGAATGGCATGCTTACGTATAATCCGCTCAACTACTTCTTTGCATCCATTCCATATTTCAGCATGTTTTTGCTGGGAGCT
GCGGCAGCAAAATCACGGTATTTGCATGAACCGGAAAAGCATCGCAAAGGATTAAAACGATTATGGATGGCTGGGCTTGT
CATCGGCATCGGCGCCCAGGTGCTGTACAGTGTAACGGATAAAGAAATATGTTTGCTGATTGGCGCGCCTTTCCTCATGT
TTTTCTATGTTACAACGGTTGTCTATCTTTATCATAAAACAAGAGTGAGAACAGTGCTGCAATCATTCTCCGCTGTTGGG
AGGATGGCATTTACCAATTATTTGATGCAGTCTATTGTGTGTACTTGGATTTTTTATCATTACGGCTTGGGCCTGTATGG
AAAAGTGTACCCTGCTGCCGGTGTGCTCATTACAATTGCTGTTTGTGCCGTTCAAATGGTCTTCAGCCACCTTTGGCTTC
GTGTCTTTCGGATGGGGCCGTTTGAGTGGTTGTGGAGAAGCGCTACGTATCTGTCGTGGCAGCCTATTGCAAAGAAAACA
AAAGTCTAG

Upstream 100 bases:

>100_bases
AAGATTGTAAGGTTTTCATGCCGGCCTGACACCTAAATCGATGTTACCGCGCTTCATTTTTTCCTACCCTTAAGGTACAG
AAAAAAGGAGCGTGATGGCT

Downstream 100 bases:

>100_bases
ATGCCTATTGGCGTCTAGACTTTTTTCTATTATTTATACACGACACGTGTTTTGCAAATGATGTCATGCAGGCCTTTTTT
CTCTCCAAAGGCGATCATGA

Product: integral inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSSLQPTLTNERIGVLDVLRGMAIFGILFVNLAHFSYPDMYLSMLGKENFFMDKWSEADFAAADILKFFIQTKCILLFSF
LFGFGMVVMMERAENKGKRFVPLYVRRLMALLLFGTIHAFLIWDGDILTEYALLGFVLLLFRKAKPKTLLIWAVSLYLLF
SIPFMLTSFDQSNGQEWVQAVTQQAKQAIHVYGSGSLKDIAEQRIHDRLVYMSSNGMLTYNPLNYFFASIPYFSMFLLGA
AAAKSRYLHEPEKHRKGLKRLWMAGLVIGIGAQVLYSVTDKEICLLIGAPFLMFFYVTTVVYLYHKTRVRTVLQSFSAVG
RMAFTNYLMQSIVCTWIFYHYGLGLYGKVYPAAGVLITIAVCAVQMVFSHLWLRVFRMGPFEWLWRSATYLSWQPIAKKT
KV

Sequences:

>Translated_402_residues
MSSLQPTLTNERIGVLDVLRGMAIFGILFVNLAHFSYPDMYLSMLGKENFFMDKWSEADFAAADILKFFIQTKCILLFSF
LFGFGMVVMMERAENKGKRFVPLYVRRLMALLLFGTIHAFLIWDGDILTEYALLGFVLLLFRKAKPKTLLIWAVSLYLLF
SIPFMLTSFDQSNGQEWVQAVTQQAKQAIHVYGSGSLKDIAEQRIHDRLVYMSSNGMLTYNPLNYFFASIPYFSMFLLGA
AAAKSRYLHEPEKHRKGLKRLWMAGLVIGIGAQVLYSVTDKEICLLIGAPFLMFFYVTTVVYLYHKTRVRTVLQSFSAVG
RMAFTNYLMQSIVCTWIFYHYGLGLYGKVYPAAGVLITIAVCAVQMVFSHLWLRVFRMGPFEWLWRSATYLSWQPIAKKT
KV
>Mature_401_residues
SSLQPTLTNERIGVLDVLRGMAIFGILFVNLAHFSYPDMYLSMLGKENFFMDKWSEADFAAADILKFFIQTKCILLFSFL
FGFGMVVMMERAENKGKRFVPLYVRRLMALLLFGTIHAFLIWDGDILTEYALLGFVLLLFRKAKPKTLLIWAVSLYLLFS
IPFMLTSFDQSNGQEWVQAVTQQAKQAIHVYGSGSLKDIAEQRIHDRLVYMSSNGMLTYNPLNYFFASIPYFSMFLLGAA
AAKSRYLHEPEKHRKGLKRLWMAGLVIGIGAQVLYSVTDKEICLLIGAPFLMFFYVTTVVYLYHKTRVRTVLQSFSAVGR
MAFTNYLMQSIVCTWIFYHYGLGLYGKVYPAAGVLITIAVCAVQMVFSHLWLRVFRMGPFEWLWRSATYLSWQPIAKKTK
V

Specific function: Involved in transport (Potential)

COG id: COG2311

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788475, Length=410, Percent_Identity=29.5121951219512, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YXAH_BACSU (P42107)

Other databases:

- EMBL:   AB005554
- EMBL:   AL009126
- PIR:   G70071
- RefSeq:   NP_391877.2
- EnsemblBacteria:   EBBACT00000000189
- GeneID:   937697
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU39970
- NMPDR:   fig|224308.1.peg.4003
- GenoList:   BSU39970
- GeneTree:   EBGT00050000002861
- HOGENOM:   HBG623822
- PhylomeDB:   P42107
- ProtClustDB:   CLSK247817
- BioCyc:   BSUB:BSU39970-MONOMER
- GO:   GO:0006810
- InterPro:   IPR007349

Pfam domain/function: PF04235 DUF418

EC number: NA

Molecular weight: Translated: 46178; Mature: 46046

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13826834)-; HASH(0x1326685c)-; HASH(0x1376f7a8)-; HASH(0x13138140)-; HASH(0x13647cd4)-; HASH(0x1360d138)-; HASH(0x12d9de18)-; HASH(0x1374ec90)-; HASH(0x137b687c)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLQPTLTNERIGVLDVLRGMAIFGILFVNLAHFSYPDMYLSMLGKENFFMDKWSEADF
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHH
AAADILKFFIQTKCILLFSFLFGFGMVVMMERAENKGKRFVPLYVRRLMALLLFGTIHAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
LIWDGDILTEYALLGFVLLLFRKAKPKTLLIWAVSLYLLFSIPFMLTSFDQSNGQEWVQA
HHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VTQQAKQAIHVYGSGSLKDIAEQRIHDRLVYMSSNGMLTYNPLNYFFASIPYFSMFLLGA
HHHHHHHHEEHCCCCCHHHHHHHHHHHHEEEEECCCEEEECHHHHHHHHHHHHHHHHHHH
AAAKSRYLHEPEKHRKGLKRLWMAGLVIGIGAQVLYSVTDKEICLLIGAPFLMFFYVTTV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VYLYHKTRVRTVLQSFSAVGRMAFTNYLMQSIVCTWIFYHYGLGLYGKVYPAAGVLITIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VCAVQMVFSHLWLRVFRMGPFEWLWRSATYLSWQPIAKKTKV
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCCH
>Mature Secondary Structure 
SSLQPTLTNERIGVLDVLRGMAIFGILFVNLAHFSYPDMYLSMLGKENFFMDKWSEADF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHH
AAADILKFFIQTKCILLFSFLFGFGMVVMMERAENKGKRFVPLYVRRLMALLLFGTIHAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHH
LIWDGDILTEYALLGFVLLLFRKAKPKTLLIWAVSLYLLFSIPFMLTSFDQSNGQEWVQA
HHCCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VTQQAKQAIHVYGSGSLKDIAEQRIHDRLVYMSSNGMLTYNPLNYFFASIPYFSMFLLGA
HHHHHHHHEEHCCCCCHHHHHHHHHHHHEEEEECCCEEEECHHHHHHHHHHHHHHHHHHH
AAAKSRYLHEPEKHRKGLKRLWMAGLVIGIGAQVLYSVTDKEICLLIGAPFLMFFYVTTV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
VYLYHKTRVRTVLQSFSAVGRMAFTNYLMQSIVCTWIFYHYGLGLYGKVYPAAGVLITIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VCAVQMVFSHLWLRVFRMGPFEWLWRSATYLSWQPIAKKTKV
HHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377