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The map label for this gene is ywdK

Identifier: 255767798

GI number: 255767798

Start: 3894030

End: 3894401

Strand: Reverse

Name: ywdK

Synonym: BSU37930

Alternate gene names: 255767798

Gene position: 3894401-3894030 (Counterclockwise)

Preceding gene: 255767799

Following gene: 16080842

Centisome position: 92.38

GC content: 47.31

Gene sequence:

>372_bases
ATGAAAGTTTTTATCATATTAGGGGCCATTAACGCCCTGCTTGCCGTGGGACTCGGAGCATTCGGCGCTCACGGATTAGA
AGGGAAAATACCTGATAAGTATCTTCAGGTTTGGCACACAGGCGTGCAGTATCATATGTATCACGCCCTTGGGTTATTCG
TTGTCGCGTTTCTGGCTGATAAATTATCCGGCATAGGCAGTGTCACGACAGCCGGCTGGCTGATGTTTGCGGGAATTGTG
CTGTTTTCCGGAAGCTTATATATTCTAAGTGTGACGCAAATCTCCATTCTTGGAGCGATCACCCCGCTCGGCGGTGTGGC
GTTTATTATTTCTTGGATTATGATCGTTGTCGCAGCCGTCAAATATCTATAA

Upstream 100 bases:

>100_bases
AAATCCGACAATCTCGTGTCAACGGAGAACAAACATTGAATTTTGGTGCAGGTGCGATAAGATAAATGATATGAGTTTAA
CGAAAAGGCGGGAGAGATAG

Downstream 100 bases:

>100_bases
ACAAAAAAGCCAATCCTCATCATATGAGTGATTGGCTTTTTTCTTATCTTGGCGAATAGGACGCCATGGAATATGGATAC
GTATAAGCAATTTCTTCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIGSVTTAGWLMFAGIV
LFSGSLYILSVTQISILGAITPLGGVAFIISWIMIVVAAVKYL

Sequences:

>Translated_123_residues
MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIGSVTTAGWLMFAGIV
LFSGSLYILSVTQISILGAITPLGGVAFIISWIMIVVAAVKYL
>Mature_123_residues
MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLADKLSGIGSVTTAGWLMFAGIV
LFSGSLYILSVTQISILGAITPLGGVAFIISWIMIVVAAVKYL

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family

Homologues:

Organism=Escherichia coli, GI1789172, Length=123, Percent_Identity=33.3333333333333, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YWDK_BACSU (P39619)

Other databases:

- EMBL:   X73124
- EMBL:   AL009126
- PIR:   S39716
- RefSeq:   NP_391672.2
- EnsemblBacteria:   EBBACT00000002576
- GeneID:   937242
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU37930
- NMPDR:   fig|224308.1.peg.3798
- GenoList:   BSU37930
- GeneTree:   EBGT00050000001378
- HOGENOM:   HBG700524
- ProtClustDB:   CLSK929123
- BioCyc:   BSUB:BSU37930-MONOMER
- InterPro:   IPR006696

Pfam domain/function: PF04241 DUF423

EC number: NA

Molecular weight: Translated: 13009; Mature: 13009

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12f712ec)-; HASH(0x12f18eb0)-; HASH(0x1312527c)-; HASH(0x12e85340)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLAD
CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSGIGSVTTAGWLMFAGIVLFSGSLYILSVTQISILGAITPLGGVAFIISWIMIVVAAV
HHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KYL
HCH
>Mature Secondary Structure
MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHALGLFVVAFLAD
CEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLSGIGSVTTAGWLMFAGIVLFSGSLYILSVTQISILGAITPLGGVAFIISWIMIVVAAV
HHCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
KYL
HCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377