Click here to switch to the map view.

The map label for this gene is ywjH

Identifier: 255767789

GI number: 255767789

Start: 3807754

End: 3808392

Strand: Reverse

Name: ywjH

Synonym: BSU37110

Alternate gene names: 255767789

Gene position: 3808392-3807754 (Counterclockwise)

Preceding gene: 16080765

Following gene: 255767788

Centisome position: 90.34

GC content: 45.85

Gene sequence:

>639_bases
ATGTTATTCTTTGTTGATACAGCCAATATCGATGAAATTAGAGAAGCGAATGAATTAGGAATTCTCGCCGGTGTAACGAC
GAATCCTAGTTTAGTAGCAAAGGAAGCTAACGTATCATTCCACGACCGTCTTCGCGAGATCACAGACGTCGTGAAAGGGT
CTGTAAGCGCAGAGGTTATTTCTTTGAAAGCTGAGGAAATGATCGAGGAAGGAAAAGAACTGGCGAAGATCGCTCCGAAC
ATTACGGTGAAAATCCCAATGACGTCTGACGGTTTAAAAGCGGTAAGAGCACTTACTGACTTAGGCATCAAAACAAACGT
TACATTGATCTTCAATGCCAACCAGGCGCTTCTTGCTGCCAGAGCGGGGGCAACATATGTATCTCCATTCCTGGGACGTT
TAGATGACATCGGCCACAACGGGCTTGACCTGATTTCAGAAGTTAAACAGATTTTTGACATTCACGGCCTTGACACGCAA
ATCATTGCAGCGTCAATCCGCCATCCGCAGCACGTGACAGAAGCTGCTCTTAGAGGGGCTCATATCGGCACAATGCCGCT
GAAAGTCATTCATGCGCTCACTAAACACCCGTTAACAGACAAAGGAATCGAACAATTCCTGGCAGACTGGAACAAATAA

Upstream 100 bases:

>100_bases
AGCCGCCTGACAGCTTGACAGGCGGTTTTCCGTCTATCTTTAGAAAGCGCAATCATATTCGCAGTTCAGAAAATTTCTTA
ATCAGGGAGGCTTTTTGAAA

Downstream 100 bases:

>100_bases
TGAAAGGGGCGGCAAACAGCTTTATGCCTGTTTGCCGCGGCCTTTGTATTTCACCGACCTGATACAGCGGATCTTCAGAT
GCTGACGCCGCTTTACAGAG

Product: translaldolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIAPN
ITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQ
IIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADWNK

Sequences:

>Translated_212_residues
MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIAPN
ITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQ
IIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADWNK
>Mature_212_residues
MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVISLKAEEMIEEGKELAKIAPN
ITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQ
IIAASIRHPQHVTEAALRGAHIGTMPLKVIHALTKHPLTDKGIEQFLADWNK

Specific function: Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway [H]

COG id: COG0176

COG function: function code G; Transaldolase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transaldolase family. Type 3B subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081788, Length=217, Percent_Identity=31.7972350230415, Blast_Score=130, Evalue=8e-32,
Organism=Escherichia coli, GI1790382, Length=214, Percent_Identity=37.8504672897196, Blast_Score=129, Evalue=1e-31,
Organism=Escherichia coli, GI1786189, Length=205, Percent_Identity=28.780487804878, Blast_Score=67, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6321480, Length=181, Percent_Identity=30.939226519337, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001585
- InterPro:   IPR004731
- InterPro:   IPR022999
- InterPro:   IPR018225 [H]

Pfam domain/function: PF00923 Transaldolase [H]

EC number: =2.2.1.2 [H]

Molecular weight: Translated: 22972; Mature: 22972

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS01054 TRANSALDOLASE_1 ; PS00958 TRANSALDOLASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI
CEEEEECCCHHHHHHHCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
SLKAEEMIEEGKELAKIAPNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAA
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
RAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGA
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCC
HIGTMPLKVIHALTKHPLTDKGIEQFLADWNK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MLFFVDTANIDEIREANELGILAGVTTNPSLVAKEANVSFHDRLREITDVVKGSVSAEVI
CEEEEECCCHHHHHHHCCCEEEEECCCCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH
SLKAEEMIEEGKELAKIAPNITVKIPMTSDGLKAVRALTDLGIKTNVTLIFNANQALLAA
HHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH
RAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQIIAASIRHPQHVTEAALRGA
HCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCC
HIGTMPLKVIHALTKHPLTDKGIEQFLADWNK
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA