Click here to switch to the map view.

The map label for this gene is mcpB

Identifier: 255767705

GI number: 255767705

Start: 3210445

End: 3212433

Strand: Reverse

Name: mcpB

Synonym: BSU31260

Alternate gene names: 255767705

Gene position: 3212433-3210445 (Counterclockwise)

Preceding gene: 255767706

Following gene: 16080177

Centisome position: 76.2

GC content: 44.8

Gene sequence:

>1989_bases
ATGAAGACTTTTATCAATTGGCTGAAGAAACCGTCTATTTCAAAGAAATTAATCGTCTCATTTATTGCGATTCTCATTAT
CCCTATTCTTATATTAGAATTTAGCTCTTACCGAAGCGCCAGCGGAAAGCTGGATCAGGAAATTATGGGAAATGCGAAAA
ACAGTGTCGATACATTTAATACAACTGTTACAAATGATCTGGGAGAAAAAGCGAAAGCAGTCACCTTTTTCAGTGAATCT
CTTAAAAGATCCGCATTCAAAGGGAAATCAAATCAAGAAGAGATCAAAGCTAAATTTTCACAATATGTATCTATTAATCA
AGGAGTAGCCAGAATTTATGGGGGCGCAGATAACGGCACTTATGTACAAGCGCCAAAAGAAAAATTGCCGGAAGGATACG
ACCCGAGACAACGGCCTTGGTACCAGGATGCGATGAAGGCCGGCGGTGAAATTGTCGTGACAGATCCTTACGTGGCTGCG
AGTGACGGAAGCATGGTCATTACCATTGCACAGGAGCTGAAGGACGGATCTGGCGTTGTCGCCATGGATATTACCATTGA
TAAATTGTTAGAACAAATGAAACAAATCAAGGTCGGAAAAGAAGGTTATGCTTTCATTGCAACAAAAAACAAAACCTATG
TCGCCCACAAGAACCATAAGGCTGGAGAAAAGCTTTCAGGCGACTGGGTAGCCAAAATGTATGCGAATGACAGCGGTGAA
CTCCAGTATACTCTTAATAACGAAGATAAAAAGATGACCTATACTACAAACGAACTGACTGGTTGGAAAATAGCCGGCAC
AATGTATATGGATGAAATTAAGGATGCCTCAAAGTCTGTGCTGACAACAGGAATGATTGTGCTGATTGCTTCCATTGTGG
CAGGCGGAATTTTAATTCTGTTTATCGTTCGTTCGATTACAAAACCGTTAAAACGTCTTGTTCAATCATCGAAAACGATC
AGCAGGGGGGATCTGACCGAAACGATCGAAATCCATTCAAAGGATGAGCTTGGAGAGCTTGGGGAAAGCTTCAATGAAAT
GGGACAATCTCTCCGCTCTCTGATCAGCGCTATTCAGGACTCGGTGAACAATGTGGCCGCATCTTCCGAACAGCTTACCG
CATCTGCCGGGCAGACGAGTAAAGCCACCGAGCATATTACGATGGCGATTGAGCAGTTCTCAAACGGAAACGAGGAGCAA
AGCGAAAAGGTTGAATCCAGCTCTCATCAGCTGAACTTAATGAATGAAGGACTCCAGCAAGTCTCACAAACATCGTCAGA
TATTACAAAGGCATCTATCCAATCAACGGAAATCGCCGGAACGGGTGAGAAGTTTGTGCAGCAGACAGTCGGACAAATGA
ACTCGATTAATCAATCTGTTCAGCAGGCTGAAGCTGTTGTCAAAGGCTTAGAAGGAAAATCAAAAGACATCACAAGCATT
TTGAGAGTCATCAACGGAATCGCTGACCAAACAAATCTGCTTGCACTAAATGCAGCCATTGAAGCGGCGCGTGCCGGAGA
GTCAGGACGCGGCTTCTCTGTCGTAGCGGAGGAGGTGCGCAAGCTGGCTGTCCAATCAGCCGATTCAGCGAAAGAAATCG
AAAAGCTGATCCAAGAAATCGTCGCAGAAATCGACACCTCTCTTCACATGTTTAAAGAGGTCAATCAGGAAGTACAGTCC
GGACTTGTTGTCACAGACAATACAAAAGAAAGCTTCCAGAGCATTTTCAGCATGACAAACGAAATCGCGGGCAAGCTGCA
GACGATGAATTCCACCGTCGAGCAGCTGTCAGACCGTTCACAGCATGTTTCAGCAGCAGTCAGCGGCATTGCAGACGTGT
CGAAAGAAAGCTCGGCAAGCATCCAGGACATTGCCGCATCAGCTGAAGAACAGCTTGCTTCCATGGAAGAAATCAGTTCC
TCAGCGACGACTCTTGCGCAGATGGCAGAAGAGCTTCGCGATCTGACGAAACAATTTAAAATCGAGTAA

Upstream 100 bases:

>100_bases
AAAGGCAGAAGACAGCCAAAAAGAACTTCTTCCATTTTTTATTTTAAAACTTTTTTAAGCAGCCGATATATACTGTATCA
AACCTGAAGGAGCAAGTGAC

Downstream 100 bases:

>100_bases
AAACCGAAAAACAGCGCTATCAAAGCGCTGTTTTTTTATATGGTAAACAATAATAAAGTCCTAGTTTAACAGGTGAATTT
AGAACTATTTTTCATTTTTT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: H3

Number of amino acids: Translated: 662; Mature: 662

Protein sequence:

>662_residues
MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMGNAKNSVDTFNTTVTNDLGEKAKAVTFFSES
LKRSAFKGKSNQEEIKAKFSQYVSINQGVARIYGGADNGTYVQAPKEKLPEGYDPRQRPWYQDAMKAGGEIVVTDPYVAA
SDGSMVITIAQELKDGSGVVAMDITIDKLLEQMKQIKVGKEGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGE
LQYTLNNEDKKMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGILILFIVRSITKPLKRLVQSSKTI
SRGDLTETIEIHSKDELGELGESFNEMGQSLRSLISAIQDSVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNEEQ
SEKVESSSHQLNLMNEGLQQVSQTSSDITKASIQSTEIAGTGEKFVQQTVGQMNSINQSVQQAEAVVKGLEGKSKDITSI
LRVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIDTSLHMFKEVNQEVQS
GLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSDRSQHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISS
SATTLAQMAEELRDLTKQFKIE

Sequences:

>Translated_662_residues
MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMGNAKNSVDTFNTTVTNDLGEKAKAVTFFSES
LKRSAFKGKSNQEEIKAKFSQYVSINQGVARIYGGADNGTYVQAPKEKLPEGYDPRQRPWYQDAMKAGGEIVVTDPYVAA
SDGSMVITIAQELKDGSGVVAMDITIDKLLEQMKQIKVGKEGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGE
LQYTLNNEDKKMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGILILFIVRSITKPLKRLVQSSKTI
SRGDLTETIEIHSKDELGELGESFNEMGQSLRSLISAIQDSVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNEEQ
SEKVESSSHQLNLMNEGLQQVSQTSSDITKASIQSTEIAGTGEKFVQQTVGQMNSINQSVQQAEAVVKGLEGKSKDITSI
LRVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIDTSLHMFKEVNQEVQS
GLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSDRSQHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISS
SATTLAQMAEELRDLTKQFKIE
>Mature_662_residues
MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMGNAKNSVDTFNTTVTNDLGEKAKAVTFFSES
LKRSAFKGKSNQEEIKAKFSQYVSINQGVARIYGGADNGTYVQAPKEKLPEGYDPRQRPWYQDAMKAGGEIVVTDPYVAA
SDGSMVITIAQELKDGSGVVAMDITIDKLLEQMKQIKVGKEGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGE
LQYTLNNEDKKMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGILILFIVRSITKPLKRLVQSSKTI
SRGDLTETIEIHSKDELGELGESFNEMGQSLRSLISAIQDSVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNEEQ
SEKVESSSHQLNLMNEGLQQVSQTSSDITKASIQSTEIAGTGEKFVQQTVGQMNSINQSVQQAEAVVKGLEGKSKDITSI
LRVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEIVAEIDTSLHMFKEVNQEVQS
GLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSDRSQHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISS
SATTLAQMAEELRDLTKQFKIE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain

Homologues:

Organism=Escherichia coli, GI2367378, Length=267, Percent_Identity=32.5842696629214, Blast_Score=131, Evalue=2e-31,
Organism=Escherichia coli, GI1788195, Length=245, Percent_Identity=34.6938775510204, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1787690, Length=415, Percent_Identity=29.8795180722892, Blast_Score=123, Evalue=5e-29,
Organism=Escherichia coli, GI1788194, Length=360, Percent_Identity=28.8888888888889, Blast_Score=115, Evalue=8e-27,
Organism=Escherichia coli, GI1789453, Length=284, Percent_Identity=30.2816901408451, Blast_Score=108, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MCPB_BACSU (P39215)

Other databases:

- EMBL:   L29189
- EMBL:   AL009126
- PIR:   A54078
- RefSeq:   NP_391004.2
- ProteinModelPortal:   P39215
- IntAct:   P39215
- EnsemblBacteria:   EBBACT00000001259
- GeneID:   937155
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31260
- NMPDR:   fig|224308.1.peg.3129
- GenoList:   BSU31260
- GeneTree:   EBGT00070000031772
- HOGENOM:   HBG338974
- ProtClustDB:   CLSK2301479
- BioCyc:   BSUB:BSU31260-MONOMER
- GO:   GO:0006935
- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094
- SMART:   SM00304
- SMART:   SM00283
- SMART:   SM00319

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH

EC number: NA

Molecular weight: Translated: 71902; Mature: 71902

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00538 CHEMOTAXIS_TRANSDUC_1; PS50111 CHEMOTAXIS_TRANSDUC_2; PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11ad9d3c)-; HASH(0x1205998c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMGNAKNSVDTFN
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHH
TTVTNDLGEKAKAVTFFSESLKRSAFKGKSNQEEIKAKFSQYVSINQGVARIYGGADNGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
YVQAPKEKLPEGYDPRQRPWYQDAMKAGGEIVVTDPYVAASDGSMVITIAQELKDGSGVV
EEECCHHHCCCCCCCCCCCCHHHHHHCCCEEEEECCEEEECCCCEEEEEHHHCCCCCCEE
AMDITIDKLLEQMKQIKVGKEGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGE
EEECHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHCCCCCC
LQYTLNNEDKKMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGILIL
EEEEECCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVRSITKPLKRLVQSSKTISRGDLTETIEIHSKDELGELGESFNEMGQSLRSLISAIQD
HHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNEEQSEKVESSSHQLNLMNEGLQQ
HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSQTSSDITKASIQSTEIAGTGEKFVQQTVGQMNSINQSVQQAEAVVKGLEGKSKDITSI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LRVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEI
HHHHHCCCCCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VAEIDTSLHMFKEVNQEVQSGLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSDRS
HHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISSSATTLAQMAEELRDLTKQFK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IE
CH
>Mature Secondary Structure
MKTFINWLKKPSISKKLIVSFIAILIIPILILEFSSYRSASGKLDQEIMGNAKNSVDTFN
CCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCHHHH
TTVTNDLGEKAKAVTFFSESLKRSAFKGKSNQEEIKAKFSQYVSINQGVARIYGGADNGT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCC
YVQAPKEKLPEGYDPRQRPWYQDAMKAGGEIVVTDPYVAASDGSMVITIAQELKDGSGVV
EEECCHHHCCCCCCCCCCCCHHHHHHCCCEEEEECCEEEECCCCEEEEEHHHCCCCCCEE
AMDITIDKLLEQMKQIKVGKEGYAFIATKNKTYVAHKNHKAGEKLSGDWVAKMYANDSGE
EEECHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCCCCCCCHHHHHHCCCCCC
LQYTLNNEDKKMTYTTNELTGWKIAGTMYMDEIKDASKSVLTTGMIVLIASIVAGGILIL
EEEEECCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIVRSITKPLKRLVQSSKTISRGDLTETIEIHSKDELGELGESFNEMGQSLRSLISAIQD
HHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SVNNVAASSEQLTASAGQTSKATEHITMAIEQFSNGNEEQSEKVESSSHQLNLMNEGLQQ
HHHHHHCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSQTSSDITKASIQSTEIAGTGEKFVQQTVGQMNSINQSVQQAEAVVKGLEGKSKDITSI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LRVINGIADQTNLLALNAAIEAARAGESGRGFSVVAEEVRKLAVQSADSAKEIEKLIQEI
HHHHHCCCCCCHHEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VAEIDTSLHMFKEVNQEVQSGLVVTDNTKESFQSIFSMTNEIAGKLQTMNSTVEQLSDRS
HHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QHVSAAVSGIADVSKESSASIQDIAASAEEQLASMEEISSSATTLAQMAEELRDLTKQFK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IE
CH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8188684; 9384377