Click here to switch to the map view.

The map label for this gene is yqaM

Identifier: 255767608

GI number: 255767608

Start: 2693597

End: 2694457

Strand: Reverse

Name: yqaM

Synonym: BSU26260

Alternate gene names: 255767608

Gene position: 2694457-2693597 (Counterclockwise)

Preceding gene: 255767609

Following gene: 255767607

Centisome position: 63.92

GC content: 39.61

Gene sequence:

>861_bases
TTGGGAACAAAACAGGCCGTATCAGAAGAAAAGGCTGAATTTGATTGTCCTTATTGTAAGGATCGTGGAATTGTCGTTTA
TCGAGTCCATAAGGACACTTCTTGGCATTTAGATGAACAGTTAGACCTTATGGTTCCGGACGATATGGTGTCGGAAGATG
ATTTTCTGTTAGGTAAGGTTTGTACGCCGGATAAAGCTAGCGAATGGAAAGATACTTATTCAAAACAGTGTGAATGTGTA
AGACGAAAGAAAATTGCCAGACTCATGGCAGCTAGTGGCATTACAGAAGAGTTTGAAAAGCTTCTCTTTGGTAACTTCAT
AACGGACGGTAAGCCAGACATGATCAAGGACGCTTATGAGTGTGCAGTGGAATACTATAAAGATTTTCAAAAGATCAAAG
GAGAAAGGCAAAACAGTATCGCATTACTTGGACAGCCAGGTAGCGGTAAAACTCATTTGCTCACGGCGATTATGAATAAT
CTGATCAAGAAAAAATCAGTACACTGCATGTATTTCCCTTATGTAGAGGGCATGGGTGATTTGAAAGCTAACTTTGATAA
CTTAGAAGCAAAACTCGATGCCATGAGAAAGGTCGAAGTTCTATTCATTGATGATTTATTTAAACCAATAAACGGTCAAC
CAAGGGCAACAGACTGGCAGGTTGAACAAATCCAGTCAGTCTTGAACTACCGGTATTTAAATCACAAACCTTTGCTGATT
TCTTCGGAGTTAACAATCGATGAGATTTTGGATATAGACGAGGCTCTTGGTTCACGAATTCACCAGATGTGCCGTGATTA
CATAGTGATTATTAGAGGCGATCGAATGCAATTAAATCATAGGTTAGGTGATTGGGAATGA

Upstream 100 bases:

>100_bases
AAGAGAAAGGAGAAACAATATGGCTATAAACAAAGCAGTCAGTATAGACACCGCATTTCAAACGATCATGCAGGAACTTC
GGGAAAGGTCAGCCCGCTTT

Downstream 100 bases:

>100_bases
AAAAGAAAACGAATATAAAAGCAACTGGTGGACTTTATATATTTGGCCCTTCAAATCGAAATGAAGGTAAAGATCTTACA
CCAACAATCCGTTTACTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 285

Protein sequence:

>286_residues
MGTKQAVSEEKAEFDCPYCKDRGIVVYRVHKDTSWHLDEQLDLMVPDDMVSEDDFLLGKVCTPDKASEWKDTYSKQCECV
RRKKIARLMAASGITEEFEKLLFGNFITDGKPDMIKDAYECAVEYYKDFQKIKGERQNSIALLGQPGSGKTHLLTAIMNN
LIKKKSVHCMYFPYVEGMGDLKANFDNLEAKLDAMRKVEVLFIDDLFKPINGQPRATDWQVEQIQSVLNYRYLNHKPLLI
SSELTIDEILDIDEALGSRIHQMCRDYIVIIRGDRMQLNHRLGDWE

Sequences:

>Translated_286_residues
MGTKQAVSEEKAEFDCPYCKDRGIVVYRVHKDTSWHLDEQLDLMVPDDMVSEDDFLLGKVCTPDKASEWKDTYSKQCECV
RRKKIARLMAASGITEEFEKLLFGNFITDGKPDMIKDAYECAVEYYKDFQKIKGERQNSIALLGQPGSGKTHLLTAIMNN
LIKKKSVHCMYFPYVEGMGDLKANFDNLEAKLDAMRKVEVLFIDDLFKPINGQPRATDWQVEQIQSVLNYRYLNHKPLLI
SSELTIDEILDIDEALGSRIHQMCRDYIVIIRGDRMQLNHRLGDWE
>Mature_285_residues
GTKQAVSEEKAEFDCPYCKDRGIVVYRVHKDTSWHLDEQLDLMVPDDMVSEDDFLLGKVCTPDKASEWKDTYSKQCECVR
RKKIARLMAASGITEEFEKLLFGNFITDGKPDMIKDAYECAVEYYKDFQKIKGERQNSIALLGQPGSGKTHLLTAIMNNL
IKKKSVHCMYFPYVEGMGDLKANFDNLEAKLDAMRKVEVLFIDDLFKPINGQPRATDWQVEQIQSVLNYRYLNHKPLLIS
SELTIDEILDIDEALGSRIHQMCRDYIVIIRGDRMQLNHRLGDWE

Specific function: Unknown

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yqxC and T.hyodysenteriae hemolysin tlyA [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013317 [H]

Pfam domain/function: PF00308 Bac_DnaA [H]

EC number: NA

Molecular weight: Translated: 33047; Mature: 32916

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTKQAVSEEKAEFDCPYCKDRGIVVYRVHKDTSWHLDEQLDLMVPDDMVSEDDFLLGKV
CCCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEEEEC
CTPDKASEWKDTYSKQCECVRRKKIARLMAASGITEEFEKLLFGNFITDGKPDMIKDAYE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
CAVEYYKDFQKIKGERQNSIALLGQPGSGKTHLLTAIMNNLIKKKSVHCMYFPYVEGMGD
HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCC
LKANFDNLEAKLDAMRKVEVLFIDDLFKPINGQPRATDWQVEQIQSVLNYRYLNHKPLLI
HHCCHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
SSELTIDEILDIDEALGSRIHQMCRDYIVIIRGDRMQLNHRLGDWE
ECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCCCCC
>Mature Secondary Structure 
GTKQAVSEEKAEFDCPYCKDRGIVVYRVHKDTSWHLDEQLDLMVPDDMVSEDDFLLGKV
CCHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEEEEC
CTPDKASEWKDTYSKQCECVRRKKIARLMAASGITEEFEKLLFGNFITDGKPDMIKDAYE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHH
CAVEYYKDFQKIKGERQNSIALLGQPGSGKTHLLTAIMNNLIKKKSVHCMYFPYVEGMGD
HHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCC
LKANFDNLEAKLDAMRKVEVLFIDDLFKPINGQPRATDWQVEQIQSVLNYRYLNHKPLLI
HHCCHHHHHHHHHHHHHHHEEEEHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE
SSELTIDEILDIDEALGSRIHQMCRDYIVIIRGDRMQLNHRLGDWE
ECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]