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The map label for this gene is yqjA

Identifier: 255767523

GI number: 255767523

Start: 2489535

End: 2490503

Strand: Reverse

Name: yqjA

Synonym: BSU23950

Alternate gene names: 255767523

Gene position: 2490503-2489535 (Counterclockwise)

Preceding gene: 16079452

Following gene: 16079450

Centisome position: 59.08

GC content: 41.28

Gene sequence:

>969_bases
ATGTTTAAAATTGGTTACCGCACAATAAAGACCGCGCTTGGAACAGCTTTGGCTATTTATATAAGCCAGTTATTGCATTT
GCAAAACTTCGCATCAGCAGGAATCATCACCATTTTGTGCATACAAATCACACAAAAACGGTCGCTTCAGGCCTCATGGG
CCCGCTTTTCGGCATGCTGTCTGGCAATTGCTTTTTCTTATCTCTTTTTCGAGCTTATTGGCTACCACCCGTTTGTGATC
GGAGCGCTTCTTTTGATATTCATTCCGATAACGGTTCTGTTAAAAATTAACGAGGGTATCGTCACCAGTTCTGTTATTAT
CCTTCATTTATACATGTCCGGCGGCATTACGCCTACTTTCATCTGGAATGAAGTTCAGCTGATTACGGTTGGCATCGGCG
TCGCTCTATTGATGAACTTGTATATGCCTAGTCTTGACCGGAAACTGATTGCCTACCGCAAAAAGATAGAGGATAACTTT
GCTGTCATTTTTGCAGAAATCGAACGGTATTTGTTAACTGGTGAGCAAGATTGGTCAGGAAAAGAAATTCCGGAAACGCA
CCAGCTCATTACGGAGGCTAAAAACCTGGCATATCGAGATGTGCAAAACCACATTTTGCGTTATGAAAATCTGCATTATC
ATTATTTTAAAATGAGAGAAAAGCAATTTGAAATTATCGAACGCCTTCTCCCTAAAGTGACATCGATCTCCATCACGGTA
GATCAGGGAAAAATGATCGCTGAATTTATTCATGATTTGCGGGAGGCGATACACCCTGGGAATACAGCATACAAATTTCT
GAAAAGACTTGCTGACATGAGAAAAGAATTTGAGGAGATGCCGCTTCCTGCGACTAGAGAGGAATTTGAAGCGAGGGCCG
CTCTCTTCCATCTTCTCGGCGAAATGGAACAATATTTAGTGATTAAAAGTTATTTTAAAGGAATAAAAGCGCAAAAATCA
CTCGGATGA

Upstream 100 bases:

>100_bases
GCGCAGGACTTTTTAGAGAAAATATTATAGAATATAAAAAAGAAGAAGGCTGGCCGCCTCTTCTTTTTTATTGAAGAAAC
AAATAGAAATGGAGTCCGAC

Downstream 100 bases:

>100_bases
TTCGCATGAGCTCTTCCTTCATTGGTCAACCTAATGAAAAAGGAGGAGCTTATGCGTTTTTTCTTATGTTCGATTTTCAT
GATGATTTCACCGATTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFSACCLAIAFSYLFFELIGYHPFVI
GALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITPTFIWNEVQLITVGIGVALLMNLYMPSLDRKLIAYRKKIEDNF
AVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRDVQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITV
DQGKMIAEFIHDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLGEMEQYLVIKSYFKGIKAQKS
LG

Sequences:

>Translated_322_residues
MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFSACCLAIAFSYLFFELIGYHPFVI
GALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITPTFIWNEVQLITVGIGVALLMNLYMPSLDRKLIAYRKKIEDNF
AVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRDVQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITV
DQGKMIAEFIHDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLGEMEQYLVIKSYFKGIKAQKS
LG
>Mature_322_residues
MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFSACCLAIAFSYLFFELIGYHPFVI
GALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITPTFIWNEVQLITVGIGVALLMNLYMPSLDRKLIAYRKKIEDNF
AVIFAEIERYLLTGEQDWSGKEIPETHQLITEAKNLAYRDVQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITV
DQGKMIAEFIHDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLGEMEQYLVIKSYFKGIKAQKS
LG

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YQJA_BACSU (P54538)

Other databases:

- EMBL:   D84432
- EMBL:   AL009126
- PIR:   A69963
- RefSeq:   NP_390275.2
- ProteinModelPortal:   P54538
- SMR:   P54538
- EnsemblBacteria:   EBBACT00000000166
- GeneID:   938681
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU23950
- NMPDR:   fig|224308.1.peg.2399
- GenoList:   BSU23950
- GeneTree:   EBGT00050000001355
- HOGENOM:   HBG399355
- ProtClustDB:   CLSK873033
- BioCyc:   BSUB:BSU23950-MONOMER
- InterPro:   IPR010343
- InterPro:   IPR021062

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C

EC number: NA

Molecular weight: Translated: 37032; Mature: 37032

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1006c83c)-; HASH(0x1041bfac)-; HASH(0x10ba3a0c)-; HASH(0xfe7ea88)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFSACC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAIAFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITPTF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEE
IWNEVQLITVGIGVALLMNLYMPSLDRKLIAYRKKIEDNFAVIFAEIERYLLTGEQDWSG
EECCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
KEIPETHQLITEAKNLAYRDVQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEE
DQGKMIAEFIHDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EMEQYLVIKSYFKGIKAQKSLG
HHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MFKIGYRTIKTALGTALAIYISQLLHLQNFASAGIITILCIQITQKRSLQASWARFSACC
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAIAFSYLFFELIGYHPFVIGALLLIFIPITVLLKINEGIVTSSVIILHLYMSGGITPTF
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEE
IWNEVQLITVGIGVALLMNLYMPSLDRKLIAYRKKIEDNFAVIFAEIERYLLTGEQDWSG
EECCCEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC
KEIPETHQLITEAKNLAYRDVQNHILRYENLHYHYFKMREKQFEIIERLLPKVTSISITV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEEE
DQGKMIAEFIHDLREAIHPGNTAYKFLKRLADMRKEFEEMPLPATREEFEARAALFHLLG
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EMEQYLVIKSYFKGIKAQKSLG
HHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377