Click here to switch to the map view.

The map label for this gene is yojG

Identifier: 255767456

GI number: 255767456

Start: 2121641

End: 2122306

Strand: Reverse

Name: yojG

Synonym: BSU19460

Alternate gene names: 255767456

Gene position: 2122306-2121641 (Counterclockwise)

Preceding gene: 16079006

Following gene: 255767455

Centisome position: 50.34

GC content: 42.94

Gene sequence:

>666_bases
ATGAAAGAACATGTACTAGTAATCCTGCCTCACCCTGATGATGAATCATATGGAGTGGCAGGCCTCATTGCCTTAAACAG
AAAAAAAGACATTCCCGTTACGTATGCCTGCGCCACTTTAGGTGAAATGGGCAGAAATATGGGCGATCCATTTTTCGCGA
ATCGGGAAACGTTGCCGCTGCTAAGAAAACAAGAGCTCATCAACGCTTGCAAAGAAATGGATATCAATGACCTTCGGATG
CTTGGACTCCGTGACAAAACGCTCGAATTTGAAGACGATGAGTATTTAGCTGATATCATGGAAGAGATCATAGATGATGT
AAAACCAAGTTTAATTGTCACATTTTATCCCGGACACGGTGTGCACCCTGACCATGATGCATGCGGGGAAGCGGTTATCC
GTGCATTATACCGCAAAAAGAAAGAAGACCGTCCGCGTACAATCTGCATGGCCATTACCCGCAACAGAGAAGAGGTTCTC
GGCGAAGCTGATGTCGTACTTGATATCAAAGAAGTAGCTGATATTAAAATGAATGCGTTAAGAGCTCACCGCACACAAAC
AGAAGGCATGCTCAGAGAGCTTGAAGAGAAATTGAAAAATAATGAACCTGTTATGGCAACATGGTTTGAAGAAGAAATAT
ATTGGACGTATCAATGGAATGATTAA

Upstream 100 bases:

>100_bases
CCGTTTATTAATGGCGGGACACCTGCCGGGCGGTAAACTGGCTATTTCTCTGCAAATCAGCGAAAAACCGTTCACAGTTT
AAAGAAAAGGGTGAATAATA

Downstream 100 bases:

>100_bases
TCAAAAAGGTATAAGGCCTTAAGCCTTATACCTTTTTTAATTTTAAGTCCGATGCAATAGCTGAAGCGAGAGTGGATCTC
AAGGAAATACCTTCGAAAGA

Product: deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MKEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPLLRKQELINACKEMDINDLRM
LGLRDKTLEFEDDEYLADIMEEIIDDVKPSLIVTFYPGHGVHPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVL
GEADVVLDIKEVADIKMNALRAHRTQTEGMLRELEEKLKNNEPVMATWFEEEIYWTYQWND

Sequences:

>Translated_221_residues
MKEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPLLRKQELINACKEMDINDLRM
LGLRDKTLEFEDDEYLADIMEEIIDDVKPSLIVTFYPGHGVHPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVL
GEADVVLDIKEVADIKMNALRAHRTQTEGMLRELEEKLKNNEPVMATWFEEEIYWTYQWND
>Mature_221_residues
MKEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPLLRKQELINACKEMDINDLRM
LGLRDKTLEFEDDEYLADIMEEIIDDVKPSLIVTFYPGHGVHPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVL
GEADVVLDIKEVADIKMNALRAHRTQTEGMLRELEEKLKNNEPVMATWFEEEIYWTYQWND

Specific function: Unknown

COG id: COG2120

COG function: function code S; Uncharacterized proteins, LmbE homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PIGL family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YOJG_BACSU (O31857)

Other databases:

- EMBL:   AF026147
- EMBL:   AL009126
- PIR:   D69906
- RefSeq:   YP_054582.2
- ProteinModelPortal:   O31857
- SMR:   O31857
- EnsemblBacteria:   EBBACT00000003950
- GeneID:   2914250
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU19460
- GenoList:   BSU19460
- GeneTree:   EBGT00050000000822
- HOGENOM:   HBG666753
- ProtClustDB:   CLSK873582
- BioCyc:   BSUB:BSU19460-MONOMER
- InterPro:   IPR003737

Pfam domain/function: PF02585 PIG-L

EC number: NA

Molecular weight: Translated: 25578; Mature: 25578

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPL
CCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
LRKQELINACKEMDINDLRMLGLRDKTLEFEDDEYLADIMEEIIDDVKPSLIVTFYPGHG
HHHHHHHHHHHHCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
VHPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVLGEADVVLDIKEVADIKMNAL
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCEEEEHHHHHHHHHHHH
RAHRTQTEGMLRELEEKLKNNEPVMATWFEEEIYWTYQWND
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECC
>Mature Secondary Structure
MKEHVLVILPHPDDESYGVAGLIALNRKKDIPVTYACATLGEMGRNMGDPFFANRETLPL
CCCCEEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHH
LRKQELINACKEMDINDLRMLGLRDKTLEFEDDEYLADIMEEIIDDVKPSLIVTFYPGHG
HHHHHHHHHHHHCCCCHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC
VHPDHDACGEAVIRALYRKKKEDRPRTICMAITRNREEVLGEADVVLDIKEVADIKMNAL
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHCCCCCEEEEHHHHHHHHHHHH
RAHRTQTEGMLRELEEKLKNNEPVMATWFEEEIYWTYQWND
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9734814; 9384377