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The map label for this gene is xylA

Identifier: 255767417

GI number: 255767417

Start: 1891908

End: 1893245

Strand: Direct

Name: xylA

Synonym: BSU17600

Alternate gene names: 255767417

Gene position: 1891908-1893245 (Clockwise)

Preceding gene: 255767415

Following gene: 16078824

Centisome position: 44.88

GC content: 40.36

Gene sequence:

>1338_bases
ATGGCTCAATCTCATTCCAGTTCAATCAACTATTTTGGAAGCGCAAACAAAGTGGTTTACGAAGGGAAAGATTCGACTAA
TCCTTTAGCATTTAAATATTATAATCCTCAAGAAGTAATCGGCGGAAAAACGCTGAAAGAGCATTTGCGATTTTCTATTG
CCTATTGGCATACATTTACTGCTGATGGTACAGACGTTTTTGGAGCAGCTACGATGCAAAGACCATGGGATCACTATAAA
GGCATGGATCTAGCGAAGATGAGAGTAGAAGCAGCATTTGAGATGTTTGAAAAACTAGATGCACCATTCTTTGCTTTTCA
TGACCGGGATATTGCACCAGAAGGCAGTACGCTAAAAGAGACAAACCAAAATTTAGATATGATCATGGGCATGATTAAAG
ATTACATGAGAAATAGCGGCGTTAAGCTATTATGGAATACAGCAAACATGTTTACGAATCCCCGTTTCGTCCATGGTGCC
GCGACTTCTTGCAATGCAGATGTGTTTGCGTATGCTGCAGCACAAGTGAAAAAAGGGTTAGAAACAGCAAAAGAGCTTGG
CGCTGAGAACTATGTATTTTGGGGCGGCCGTGAAGGATATGAAACATTGTTAAATACCGATTTAAAATTTGAGCTTGATA
ATTTGGCTAGATTTATGCATATGGCAGTGGATTATGCGAAGGAAATCGGGTACACAGGGCAGTTTTTGATTGAGCCAAAA
CCAAAAGAGCCGACCACCCATCAATACGATACAGATGCAGCAACAACCATTGCCTTTTTGAAGCAATATGGCTTAGACAA
TCATTTTAAATTAAATCTTGAAGCCAATCATGCCACATTAGCCGGGCATACATTCGAACATGAATTACGCATGGCAAGAG
TACATGGTCTGCTTGGCTCTGTTGACGCAAACCAGGGTCATCCTCTTTTAGGCTGGGACACGGATGAATTTCCGACGGAT
TTATATTCTACGACATTAGCAATGTACGAAATCCTGCAAAATGGCGGCCTTGGAAGCGGCGGATTAAACTTTGACGCGAA
GGTCAGAAGATCTTCTTTCGAGCCTGATGATCTAATATATGCCCATATTGCAGGGATGGATGCATTTGCAAGAGGATTGA
AAGTTGCCCACAAATTAATCGAAGATCGTGTGTTTGAAGATGTGATTCAACATCGTTACCGCAGCTTTACTGAAGGGATT
GGTCTTGAAATTATAGAAGGAAGAGCTAATTTCCACACACTTGAGCAATATGCGCTAAATCATAAATCAATTAAAAACGA
ATCTGGAAGACAGGAGAAATTAAAAGCGATATTGAACCAATACATTTTAGAAGTATAA

Upstream 100 bases:

>100_bases
AGTTAGTTTGTTTAAACAACAAACTAATAGGTGATGTACTTACTATATGAAATAAAATGCATCTGTATTTGAATGAATTT
ATTTTTAAGGGGGAAATCAC

Downstream 100 bases:

>100_bases
CAGGATAAGCTCCAGATCCTGCTATCAATACCAAGTCACTGAATTACCCGTCATGATTCCTTTCCTATTGCTTGTTGTTA
TGACGGGTAACTTCTATAAT

Product: xylose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MAQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAATMQRPWDHYK
GMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGA
ATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPK
PKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGHPLLGWDTDEFPTD
LYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIYAHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGI
GLEIIEGRANFHTLEQYALNHKSIKNESGRQEKLKAILNQYILEV

Sequences:

>Translated_445_residues
MAQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAATMQRPWDHYK
GMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGA
ATSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPK
PKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGHPLLGWDTDEFPTD
LYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIYAHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGI
GLEIIEGRANFHTLEQYALNHKSIKNESGRQEKLKAILNQYILEV
>Mature_444_residues
AQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFTADGTDVFGAATMQRPWDHYKG
MDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKETNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGAA
TSCNADVFAYAAAQVKKGLETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPKP
KEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGSVDANQGHPLLGWDTDEFPTDL
YSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIYAHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGIG
LEIIEGRANFHTLEQYALNHKSIKNESGRQEKLKAILNQYILEV

Specific function: Unknown

COG id: COG2115

COG function: function code G; Xylose isomerase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xylose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1789988, Length=436, Percent_Identity=51.3761467889908, Blast_Score=469, Evalue=1e-133,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307
- InterPro:   IPR013452
- InterPro:   IPR001998 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: =5.3.1.5 [H]

Molecular weight: Translated: 50282; Mature: 50151

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS00172 XYLOSE_ISOMERASE_1 ; PS00173 XYLOSE_ISOMERASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFT
CCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECHHHHHCCHHHHHHHHEEEEEEEEEC
ADGTDVFGAATMQRPWDHYKGMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKE
CCCCCHHCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
TNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGAATSCNADVFAYAAAQVKKGL
CCCCHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
ETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPK
HHHHHCCCCCEEEECCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCC
PKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGS
CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHC
VDANQGHPLLGWDTDEFPTDLYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIY
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEE
AHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGIGLEIIEGRANFHTLEQYALN
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
HKSIKNESGRQEKLKAILNQYILEV
HHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AQSHSSSINYFGSANKVVYEGKDSTNPLAFKYYNPQEVIGGKTLKEHLRFSIAYWHTFT
CCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECHHHHHCCHHHHHHHHEEEEEEEEEC
ADGTDVFGAATMQRPWDHYKGMDLAKMRVEAAFEMFEKLDAPFFAFHDRDIAPEGSTLKE
CCCCCHHCHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
TNQNLDMIMGMIKDYMRNSGVKLLWNTANMFTNPRFVHGAATSCNADVFAYAAAQVKKGL
CCCCHHHHHHHHHHHHHCCCCEEEEECHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHH
ETAKELGAENYVFWGGREGYETLLNTDLKFELDNLARFMHMAVDYAKEIGYTGQFLIEPK
HHHHHCCCCCEEEECCCCHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEECCC
PKEPTTHQYDTDAATTIAFLKQYGLDNHFKLNLEANHATLAGHTFEHELRMARVHGLLGS
CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHC
VDANQGHPLLGWDTDEFPTDLYSTTLAMYEILQNGGLGSGGLNFDAKVRRSSFEPDDLIY
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCEEE
AHIAGMDAFARGLKVAHKLIEDRVFEDVIQHRYRSFTEGIGLEIIEGRANFHTLEQYALN
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
HKSIKNESGRQEKLKAILNQYILEV
HHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA