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The map label for this gene is ylbH

Identifier: 255767341

GI number: 255767341

Start: 1569519

End: 1570073

Strand: Direct

Name: ylbH

Synonym: BSU15010

Alternate gene names: 255767341

Gene position: 1569519-1570073 (Clockwise)

Preceding gene: 16078564

Following gene: 16078566

Centisome position: 37.23

GC content: 44.68

Gene sequence:

>555_bases
ATGAGAGTAATTTCTGGATCAAAAAAAGGCCGTTCACTAAAGGCTGTAGCCGGAACATCAACAAGACCGACAACCGACAA
AGTGAAGGAATCCATTTTCAATATGATCGGCCCTTATTTTGACGGGGGCAGGGGACTTGACTTATTCGCAGGGAGCGGAG
GTCTTGGAATCGAAGCGCTTTCACGCGGGTTTGAGCATTGTATATTCGTTGACCGTGATTTTAAAGCGATTCAAACGGTA
AAATCTAATTTGAAAACGCTGGAGCTTACAAAACATGCACAGGTATACCGCAATGATGCGGAACGTGCTTTGCACGCTGC
TGCTAAAAGAGAAACCGGCTTTCGCGGAATTTTTCTCGATCCGCCGTATAAGGAACAAAAGCTGAAAGCACTTTTAACTT
TGATTGACGAATATCAAATGCTGGAAGAAGACGGCTTTATCGTCGCTGAGCATGACAGAGAGGTCGAGCTTCCCGAAACC
GTAGGAGATCTTGTGATGACAAGAAAAGAAACCTATGGGTTAACAGGTGTAGCGATTTATAAAAAGAGGGGGTAG

Upstream 100 bases:

>100_bases
AATGCTTTATGTTAAGATAGGATTGATTTTTTTCTATGTACATAGCGGCGTCCGGCCGAATAAAGAAACAAAATAGCTTT
TAGAAAAAGTGGTGTGGAAC

Downstream 100 bases:

>100_bases
TGAGGTGGCGAGTATAGCTGTCTGTCCCGGCAGTTTTGATCCTGTGACCTACGGGCATCTGGACATCATCAAACGCGGGG
CGCATATTTTTGAACAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMIGPYFDGGRGLDLFAGSGGLGIEALSRGFEHCIFVDRDFKAIQTV
KSNLKTLELTKHAQVYRNDAERALHAAAKRETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPET
VGDLVMTRKETYGLTGVAIYKKRG

Sequences:

>Translated_184_residues
MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMIGPYFDGGRGLDLFAGSGGLGIEALSRGFEHCIFVDRDFKAIQTV
KSNLKTLELTKHAQVYRNDAERALHAAAKRETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPET
VGDLVMTRKETYGLTGVAIYKKRG
>Mature_184_residues
MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMIGPYFDGGRGLDLFAGSGGLGIEALSRGFEHCIFVDRDFKAIQTV
KSNLKTLELTKHAQVYRNDAERALHAAAKRETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPET
VGDLVMTRKETYGLTGVAIYKKRG

Specific function: May catalyze the S-adenosyl-L-methionine-dependent methylation of a specific base in rRNA (Potential)

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmD family

Homologues:

Organism=Escherichia coli, GI1789875, Length=182, Percent_Identity=31.3186813186813, Blast_Score=101, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YLBH_BACSU (O34331)

Other databases:

- EMBL:   Z98682
- EMBL:   AL009126
- PIR:   E69874
- RefSeq:   NP_389384.2
- HSSP:   Q831P8
- ProteinModelPortal:   O34331
- SMR:   O34331
- EnsemblBacteria:   EBBACT00000002273
- GeneID:   936402
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU15010
- NMPDR:   fig|224308.1.peg.1503
- GenoList:   BSU15010
- GeneTree:   EBGT00050000001921
- HOGENOM:   HBG706795
- ProtClustDB:   CLSK929009
- BioCyc:   BSUB:BSU15010-MONOMER
- InterPro:   IPR004398
- PIRSF:   PIRSF004553
- TIGRFAMs:   TIGR00095

Pfam domain/function: PF03602 Cons_hypoth95

EC number: 2.1.1.- [C]

Molecular weight: Translated: 20472; Mature: 20472

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMIGPYFDGGRGLDLFAGSGGLGIEAL
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
SRGFEHCIFVDRDFKAIQTVKSNLKTLELTKHAQVYRNDAERALHAAAKRETGFRGIFLD
HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPETVGDLVMTRKETYGLTGVAIY
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
KKRG
ECCC
>Mature Secondary Structure
MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMIGPYFDGGRGLDLFAGSGGLGIEAL
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHH
SRGFEHCIFVDRDFKAIQTVKSNLKTLELTKHAQVYRNDAERALHAAAKRETGFRGIFLD
HCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPETVGDLVMTRKETYGLTGVAIY
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEE
KKRG
ECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377