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The map label for this gene is yizB

Identifier: 255767247

GI number: 255767247

Start: 1184657

End: 1185004

Strand: Direct

Name: yizB

Synonym: BSU11079

Alternate gene names: 255767247

Gene position: 1184657-1185004 (Clockwise)

Preceding gene: 16078167

Following gene: 255767248

Centisome position: 28.1

GC content: 43.1

Gene sequence:

>348_bases
ATGAAAACGAATCAAGTTAATGACCGCTGGATTGTTCAATTTCGAAAAGGGATTTTCGAGCTGGCCATCCTATCCCTTCT
GCGTTCTAAACCGATGTACGGTTATGAGCTGACGTCATCCTTAAAAACCACCTCGGCGCTGGCTATTTCAGAGGGAGCGA
TTTATCCGATTTTGAAACGTATGACCGAGAAGGGATGGATCGAATTTTTTTGGGAAGATTCACTGGACGGCCCGAAAAGA
AAGTATTACAAAATGACGCAAAAAGGAGAAGAAATGTTAAAAGAACGGCTGGAGAAATACCTGGAAACCCATCAAGCCTT
ACTGTCTTTATCGGGGGATTTGCTATGA

Upstream 100 bases:

>100_bases
AAAAGTATGAGAAATTCCATTTTTGTTAAAAGGAAAAACAGGACATTTTACACTGCTATATGTGATTGATATATAGTGTT
TTTTTCGATATATTTAAACC

Downstream 100 bases:

>100_bases
ATGGACAGCTTATCATTGACCGATACATGGAGGAACTAAATGCAGAGCTGGCGAATATGCCTGATGTAGAGAGAGAAAAC
GCTATCGACGAATTAAAGGG

Product: DNA/RNA binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKTNQVNDRWIVQFRKGIFELAILSLLRSKPMYGYELTSSLKTTSALAISEGAIYPILKRMTEKGWIEFFWEDSLDGPKR
KYYKMTQKGEEMLKERLEKYLETHQALLSLSGDLL

Sequences:

>Translated_115_residues
MKTNQVNDRWIVQFRKGIFELAILSLLRSKPMYGYELTSSLKTTSALAISEGAIYPILKRMTEKGWIEFFWEDSLDGPKR
KYYKMTQKGEEMLKERLEKYLETHQALLSLSGDLL
>Mature_115_residues
MKTNQVNDRWIVQFRKGIFELAILSLLRSKPMYGYELTSSLKTTSALAISEGAIYPILKRMTEKGWIEFFWEDSLDGPKR
KYYKMTQKGEEMLKERLEKYLETHQALLSLSGDLL

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YIZB_BACSU (C0H3Y4)

Other databases:

- EMBL:   AL009126
- RefSeq:   YP_003097701.1
- ProteinModelPortal:   C0H3Y4
- SMR:   C0H3Y4
- EnsemblBacteria:   EBBACT00000082684
- GeneID:   8302950
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU11079
- GenoList:   BSU11079
- GeneTree:   EBGT00070000031780
- ProtClustDB:   CLSK2519611
- BioCyc:   BSUB:BSU11079-MONOMER
- InterPro:   IPR005149
- InterPro:   IPR011991
- Gene3D:   G3DSA:1.10.10.10

Pfam domain/function: PF03551 PadR

EC number: NA

Molecular weight: Translated: 13486; Mature: 13486

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNQVNDRWIVQFRKGIFELAILSLLRSKPMYGYELTSSLKTTSALAISEGAIYPILKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
MTEKGWIEFFWEDSLDGPKRKYYKMTQKGEEMLKERLEKYLETHQALLSLSGDLL
HHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTNQVNDRWIVQFRKGIFELAILSLLRSKPMYGYELTSSLKTTSALAISEGAIYPILKR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHH
MTEKGWIEFFWEDSLDGPKRKYYKMTQKGEEMLKERLEKYLETHQALLSLSGDLL
HHHCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377