Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24375564

GI number:

Start: 4229648

End: 4231774

Strand: Direct

Name: Not Available

Synonym: SO_4077

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375562

Following gene: 24375566

Centisome position: NA

GC content: NA

Gene sequence:

>2127_bases
ATGGCTGCAACTGCTTTAAATATCCCCCATGGTTTTAAATGCTCGGAAATATCCACCGCACTTACCCTTGCATTAGGCTT
ATCCTTTGCCCCGCTGGCAATGGCCAATGATAATGAACAGACTCAGATTGAGCGTATTTTGGTCCACGGTGAGCAGAGTA
TCTGCCGCAATGCCCTAGGCTCAGCCGATGCCTTACTTAAAGATCAAGGCGTTGATTTCTCTGAAGCTGGAGGAGTTTCG
GCGCTACCAGTGCTGAACGGCATGATGGGCGATCGCATTAAAGTGTTAGTCGACGGCGCAGACATTACCGCCTCCTGCGC
CAACCAAATGAACCCACCGCTATCTTATGTTTCTGCCAACCAAATCAACTCGGTCGAAGTGGTCGCGGGCGTGTCCCCCG
TCAGTGCGGGCGGCGACAATATTGCTGGCGTGATTAAGGTTAATAGTCTCAATCCTAAGTTTACTGACAGCGAAAACTTA
AGTTTTGAAAGCGGTGAGATTTCATCGGGATACCGCAGCACCAGCGACAGCTTATTACTCGGCGCCAAAGCCGGTATTGC
CAGCAAAAATGTAAGCTTAAGCTATCAAGGAGCCTATGAAGACGCCAACAGTTACCACGATGGTAACGGCGACAAAGTGC
TCGATACTTTATATCGCGCTCAAAACCACGCCTTAACGGCAGCATGGCGCGATGAAAAACAACAACTGGCCGTTAAACTG
ACCCATCAAGCCATTCCATTTCAAGGTTTTCCTAACCAATACATGGATATGACTGATAACAAGAGCTACGGTGCCCTAGT
TCGCTATCTACGGGATTTAGAAAATGACGGCGAGTTTAGTGCCCAGCTCAACTGGCACAGTGTAAAACATGAAATGGGCT
TCTTCACCCCAGAAAAAACCGGCAAAATGCCGATGAATACAGAGGGTAGCGATTACAGCTACCAACTGCACTGGCGCTTA
ACTATGGGGGATGACAGTACGCTACTGCTTGGCCAGGAATACTATAGCTATCAATTAGATGATATTTGGCCAGCGGTGCC
AGGCACTATGATGGCCCCCAATGACTATATCAATATTAACGATGGTGAACGTCGCCGCGCTGCAGTTTACGGTGAATGGC
AACAAAACCTCAATCCGCTTTGGTGGTTATCCGCTGGGGTACGCTATGAATATGTGACCACAGATACGGGTGAAGTGCAG
GCCTACAGCAACATGCCAATGATGGGCATGCCCAATGTGGATGCCGAGGCGGCAAAAGCCTTTAATGCCATGGACAGAAG
CCGAGACGATAACCTAATCGATGCGACATTGCTGGCACGCTATCAATTGTCGGCCAAACAACAACTGGAATTTGGCTTAG
CCCGTAAAAATCGCGCCCCTAACCTCTATGAGCGTTACAGTTGGGGCCGCGGCGTCATGGCAACCACTATGATTGGCTGG
TATGGCGACGGTAACGGTTATGTCGGCAACCCCGATCTAAAGCCCGAAACGGCCCACACCCTAAGTGCAGCTTACAAATT
TAATGGCGATGCATGGCAGTTCTCGACCACGGCTTGGTATAGCGCAGTAACCGATTATATCGATGCTGAAGTGATTGGCA
GCTTTAACCGTACCAGTACACCCGCAGGTAAACGCAATATCCTAAAATTCACCAACGAAGATGCCAATTTATATGGCGCT
AAGTTCAGCGCACTCTACCTATTAGCCGATACCGACAGTGGTAAGTGGCAGATGCTCGGTAAACTCAACATCACCCGTGG
CGAGCGCGATGAAGGTAATGAACCACTTTATCAAATCAAACCGTTACAAACCGAGTTAGCCCTCAGCCACCAACTCGGCG
ATTGGGAAAACCGCTTGGCATGGCAATGGGTGGCGACAAAGGATCGCGTTGATGATCGCCGTTTAGAGAACGAAACGAGC
AGCTATTCGCTACTGAACTTAAGCAGTAGCATCAAATGGCAAGAGCTGAGTTTAACCTTTGCGATCAATAACCTGTTTGA
TACTTACTATGAGCTGCCACTCGGTGGTGTAAGCATTGCCGAGTTTAAGGCCGATAGCAGCAATGGCTTTAGCCAAGTCG
CGGGCTCGGGTCGCTCATTTGAATTAGGTGCAAGCTACCGCTTCTAA

Upstream 100 bases:

>100_bases
CCTTATCTTTATAAGCTCTGCGACAAAATGCCGCACCTGTCACACTTCGATGATCTTTATAATGCAGCGCAATTTATCCA
AGTGAATGGAAGACAATAAG

Downstream 100 bases:

>100_bases
AAAGTAGAACGACATAAAATCAAAAAGGGCAAATGCGAACGCATTTGCCCTTTTGTTTAAAGCTCATTCAGTTAACGCTG
AGCCGTTAGACTGAATGACT

Product: TonB-dependent receptor, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>708_residues
MAATALNIPHGFKCSEISTALTLALGLSFAPLAMANDNEQTQIERILVHGEQSICRNALGSADALLKDQGVDFSEAGGVS
ALPVLNGMMGDRIKVLVDGADITASCANQMNPPLSYVSANQINSVEVVAGVSPVSAGGDNIAGVIKVNSLNPKFTDSENL
SFESGEISSGYRSTSDSLLLGAKAGIASKNVSLSYQGAYEDANSYHDGNGDKVLDTLYRAQNHALTAAWRDEKQQLAVKL
THQAIPFQGFPNQYMDMTDNKSYGALVRYLRDLENDGEFSAQLNWHSVKHEMGFFTPEKTGKMPMNTEGSDYSYQLHWRL
TMGDDSTLLLGQEYYSYQLDDIWPAVPGTMMAPNDYININDGERRRAAVYGEWQQNLNPLWWLSAGVRYEYVTTDTGEVQ
AYSNMPMMGMPNVDAEAAKAFNAMDRSRDDNLIDATLLARYQLSAKQQLEFGLARKNRAPNLYERYSWGRGVMATTMIGW
YGDGNGYVGNPDLKPETAHTLSAAYKFNGDAWQFSTTAWYSAVTDYIDAEVIGSFNRTSTPAGKRNILKFTNEDANLYGA
KFSALYLLADTDSGKWQMLGKLNITRGERDEGNEPLYQIKPLQTELALSHQLGDWENRLAWQWVATKDRVDDRRLENETS
SYSLLNLSSSIKWQELSLTFAINNLFDTYYELPLGGVSIAEFKADSSNGFSQVAGSGRSFELGASYRF

Sequences:
NA

Specific function: NA

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA