| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24375509
GI number:
Start: 4171868
End: 4174699
Strand: Reverse
Name: Not Available
Synonym: SO_4022
Alternate gene names: NA
Gene position: NA
Preceding gene: 24375513
Following gene: 24375508
Centisome position: NA
GC content: NA
Gene sequence:
>2832_bases ATGACTAATTTAAAACAAATCCAGTTTAAACGCCTGTGGCTATTGCTGCTCTTCATCAGCATGGCCTTACCATTAAGCGC GACCGAAGCGCCTTTGTGGCCTGAGTCGGCCAATTTACCCTTAAGCGAGCGCGTTCACAGCGGTGAACTTGCCAATGGTA TGCGTTATTTATTGGTTAGCAATAAGACGCCGGAGCAGGCAGTCATAGTGCGGATGCGGGTGGATGTAGGCTCTTTGGTT GAGTCGGATTCCGAGCAAGGATTAGTGCACTTTCTTGAGCATATGGCTTTTAATGGCTCCACGGGACTCGCAGCGGGGGA GATGATGCCGACATTGCAGCGCCTTGGCCTGAGTTTTGGTGCTGATACCAATGCGGTGACTGAATTTCAGCAAACGGTTT ATCAGTTGAACTTACCGAGCAATAGCCAAGATAAAGTCGATACCGCCTTGTTTTTAATGCGCGAAATCGCCAGTAATCTG TTGCTTGACCCCGCCATTATCGAGCGCGAAAAAGCGGTGGTCTTGTCTGAACTACGTGAGCGCAGTAGCACTGATTTAGA AAACTATCGCCACCAGTTAGCCTTTTTAATGCCGCAAACCTTGCTGTCGCAGCGCTTTCCCGTAGGAGAGGCGACGAGCA TTCAAAATGCGAATCGTGAAACGTTATTGTCCCTCTATCAGCGTTTTTATACGCCATCCCGTACGACCTTAATCGTGGTG GGCGATATCGATGTCGGCAGCATCGAGCAAAAAATCACCCAGCAATTTGCTAATTGGCAAGCGGCGCCGCAGGCCGCTGG GGTGAAGGCGCAATCGATAGGCATGGTGCAGGCTAACGCCTCCGTTGAGGCGGCGGCATTTTTTGATCCAAGTCTGCAAC CCTCTGTTTCTTTGGGTATGTTAACTCCTCAAACGCCAAGGCCAGATTCGCCCGCACTACGTGAGCAGGAGATGTTATTA GAGATTGCCCACGGCATTTTGTATCGTCGTTTAGAGTCACAGTTGCTACATAGCCAAGGTTTGTATGGCGTGAGTCTACA AATTGGGCCGCAATATGATATTGCCTACGGCACGCAAATGACGCTGGGAACGCAGGAAAACAACTGGCAGCAAGGGCTTG CGTTGTTGGAACAAACACTACGTCAGGCGCTGGAATTTGGCTTTAGCCAACAGGAAATCGACCAACAGCTAAAAAGAATG CACAAGAGCTATCAGCTTAATACAGCGGGGAGTAGCACTATCCACAGTGTGAACATTGCCGAAAGCTTAGTGAGTGCGGT AGCGAGCAGGCGCGTGCCTGTGGAGCCTGAGTGGCAACTCGCATTGTTTGAAAAGCTGATGCCAAGTGTTACACCGCAAA AACTGCAACAGCTGTTTAAACAGACTTGGGAAGGGACGCCTTATCTGTATCTAACCAATAATAAACTCATTGAAAATATT GAAAAAAAGCTGATAGATGTCTATCGCGCGAGTCAAAAGCAAGCGGTTAAGACGCCAGAAACCAAAGCAATTGCAGAATT TGGCTATAGCCAATTTGGTGAGCTTGGGCAGATTGTTGCCGATCAGCGTGATGCTGCAACAGGGATACGCAAGGTACAGT TTGCTAATGGTGTGCGCCTTAATCTAAAGCCGACAACCTTCAATAAGGGGGTCACGCTCGTCAGTTTGAATATCGGTTTT GGTGAGATAGCTTTCCCTGAGTTAGATGGCTTGTCCTATCTGTTTAACCGTGCGTTTGTCGAGGGCGGTTTGGGACTTCA CGATTTAGATAGCTTGCAGGAGATTTTTGCTGGCCAAGATATCTCAGTCAGTTTGAGTTTGCGTGAGCAGAGTTTTGGCG GTGAGATTAGTGCCAATGCGGCCGAGCTTCGCACTCAATTAGGCGTGCTAACGGCTTACCTAGTCGATCCCGGTATGGAT AAGCAGGCAGAGCAGTTATTCCGTGAACAAGTAATTGCCGAGCAGCAGAGCATTCATAGTAATCCGCAGTTGGAGTTTTC GAATCAGTTTGCCCGTATTGCCCATAATGGCGATAAACGTTATGGCTATGGCAACCCTGATGAAATCCTTAAACGTCAGT TTGCTGAACTCGCGCCTAGTTTCCATTCTGCGGTACAGCAGGGGGCGATAGAGCTGGCTATCGTTGGTGATTTTGATGAG GACAAAGCCATTGCTGAGGTTGCGCAAACCTTAGGGGCGATTTCCCGTCAGCCGATCCCTAAAGGCCAAACGATTGTGCC AGTATTTCCAAACGTGCCAGCGCAAATCAAGCTGACGCATTATGGTCAAGTTGATATGGCGGCACTGGCGCAGGTGTGGC CGACAACGGATATGACGAACCTAAGTGAACATGCAGGTTTAGGGTTACTCGAACAGGTTCTGAGTATTTTACTTACCGAG AATGTACGCGAAAAAGCGGGTGCGAGTTATTCACCCTCTGCATTTTCATATAATGACTTAAATCCAACGGGATATGGTTA TCTCGGCCTATTTAGTGTGACGACTCAGGCTATGTTGCCTGAGGTGGCTAAGTATTACGCCGCCGCAGTTAAGCAGGTTA AAGCGCCATCGGGGATCAGTGAGGATTTGCTCAATCGCGCCCGCCAACCGGTGCTGGAGTGGATGCAGATGGCACCGCAA AGTAATAATTTTTGGTTAGATTTGGCCTCAACCGCCCAAAGCCAACCAGAGCGTTTTGCGGCCTTTAACCAACGCTTGGC GCTGGTGCAACACATCACGCCCGCCGAGTTAAGCCAATTGGCGCAGAAATACTTAAAGGATGATAAAAGCTTAATCATTC AAACCCTTCCTGCACTGGTTGCATCTCAGTAA
Upstream 100 bases:
>100_bases AAAGCATTTTAATGGCTATAGTGAAAAGTTAATTTATCAATATTGAGGTAAGCATTTTCTCCGGTTAATAAACCTATTCT TGGGGAGAAAATAAACTTTT
Downstream 100 bases:
>100_bases TCTATCAACCCACAAGAAAACCAATAACCCCTGCGATAGCATTTCGCAGGGGGGTTGATGCTTTTATCTGTCATTGCGGA GCATTTTTAGGGCTAGCTTT
Product: M16 family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>943_residues MTNLKQIQFKRLWLLLLFISMALPLSATEAPLWPESANLPLSERVHSGELANGMRYLLVSNKTPEQAVIVRMRVDVGSLV ESDSEQGLVHFLEHMAFNGSTGLAAGEMMPTLQRLGLSFGADTNAVTEFQQTVYQLNLPSNSQDKVDTALFLMREIASNL LLDPAIIEREKAVVLSELRERSSTDLENYRHQLAFLMPQTLLSQRFPVGEATSIQNANRETLLSLYQRFYTPSRTTLIVV GDIDVGSIEQKITQQFANWQAAPQAAGVKAQSIGMVQANASVEAAAFFDPSLQPSVSLGMLTPQTPRPDSPALREQEMLL EIAHGILYRRLESQLLHSQGLYGVSLQIGPQYDIAYGTQMTLGTQENNWQQGLALLEQTLRQALEFGFSQQEIDQQLKRM HKSYQLNTAGSSTIHSVNIAESLVSAVASRRVPVEPEWQLALFEKLMPSVTPQKLQQLFKQTWEGTPYLYLTNNKLIENI EKKLIDVYRASQKQAVKTPETKAIAEFGYSQFGELGQIVADQRDAATGIRKVQFANGVRLNLKPTTFNKGVTLVSLNIGF GEIAFPELDGLSYLFNRAFVEGGLGLHDLDSLQEIFAGQDISVSLSLREQSFGGEISANAAELRTQLGVLTAYLVDPGMD KQAEQLFREQVIAEQQSIHSNPQLEFSNQFARIAHNGDKRYGYGNPDEILKRQFAELAPSFHSAVQQGAIELAIVGDFDE DKAIAEVAQTLGAISRQPIPKGQTIVPVFPNVPAQIKLTHYGQVDMAALAQVWPTTDMTNLSEHAGLGLLEQVLSILLTE NVREKAGASYSPSAFSYNDLNPTGYGYLGLFSVTTQAMLPEVAKYYAAAVKQVKAPSGISEDLLNRARQPVLEWMQMAPQ SNNFWLDLASTAQSQPERFAAFNQRLALVQHITPAELSQLAQKYLKDDKSLIIQTLPALVASQ
Sequences:
NA
Specific function: NA
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA