Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is nrfA

Identifier: 24375467

GI number:

Start: 4116204

End: 4117607

Strand: Reverse

Name: nrfA

Synonym: SO_3980

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375470

Following gene: 24375462

Centisome position: NA

GC content: NA

Gene sequence:

>1404_bases
ATGATGAAGAAGATGACAGGTAAGACTTTTGCATTAAGTGCATTGGTTGCCGCCAGCTTTATGGCTGCGGGGGCTATGGC
GAGTGATAAAACTGAGCCTCGCAACGAAGTTTATAAAGATAAATTTAAAAATCAATACAATAGCTGGCATGACACCGCAA
AGAGTGAAGAGCTTGTTGATGCGCTAGAGCAGGACCCTAATATGGTTATCCTGTGGGCAGGCTATGCATTTGCCAAAGAT
TATAAAGCCCCTCGTGGCCACATGTATGCCGTGACTGACGTACGTAATACCTTGCGTACTGGCGCGCCAAAAAATGCGGA
AGATGGTCCATTACCTATGGCTTGCTGGAGCTGTAAAAGTCCTGACGTGCCTCGCTTAATTGAAGAGCAAGGTGAAGACG
GTTACTTCAAAGGTAAGTGGGCGAAAGGTGGCCCAGAAGTGACTAACACTATTGGCTGTAGCGATTGCCACGAAAAAGGT
TCACCAAAATTACGTATTTCTCGTCCTTATGTTGACCGCGCATTAGATGCAATTGGTACTCCATTTAGCAAAGCTTCTAA
GCAAGACAAAGAGTCAATGGTATGCGCCCAGTGTCACGTTGAATACTACTTTGAGAAAAAAGAAGATAAGAAAGGTTTCG
TCAAATTCCCTTGGGATATGGGCGTAACTGTAGATCAAATGGAAGTTTACTATGATGGCATTGAGTTCTCTGATTGGACT
CACGCACTGTCTAAAACGCCAATGTTAAAAGCCCAGCATCCCGAGTATGAAACGTGGAAAATGGGTATCCATGGTAAAAA
TAATGTCAGTTGCGTTGACTGTCATATGCCTAAAGTGACTAGCCCTGAAGGTAAGAAGTTTACTGACCATAAAGTGGGTA
ACCCATTTGATCGTTTCGAAGAAACCTGTGCAACTTGCCACAGCCAAACCAAAGAGTTCTTAGTTGGCGTCACTAATGAG
CGCAAAGCTAAAGTGAAAGAAATGAAACTCAAAGCGGAAGAGCAATTAGTGAAAGCGCACTTCGAAGCGGCGAAAGCATG
GGAATTAGGTGCCACTGAAGCCGAAATGAAGCCAATTCTGACTGATATCCGCCATGCTCAATGGCGCTGGGATTTAGCCA
TTGCCTCACATGGCGTTGCAGCTCATGCTCCAGAAGAAGCACTACGCGTGTTGGGCACCTCTGTTAATAAAGCGGCCGAT
GCCCGTGTTAAGTTAGCACAGTTGTTAGCGAAAAAAGGCTTAACAGACCCTGTTGCCATCCCTGATATTTCGACTAAAGC
TAAGGCTCAAGCAGTACTCGGAATGGACATGGAAAAGATGAATGCAGAGAAAGAAGCATTCAAGAAAGACATGTTACCTA
AGTGGGATGCTGAAGCGAAAAAACGCGAAGCGACTTACAAGTAA

Upstream 100 bases:

>100_bases
TCAGATACCCCCTAAGAGGTATATTTTTAGCGGTATTTAGCTACTAACTTTGGCGCTGGAGATGTCGTGTTTTACAACAA
AAATGCAACGCGGAGATGAG

Downstream 100 bases:

>100_bases
TCATCCTTGAAGATGAGCTAACCCTTCATCGCAAAGCCCCCGCAATTTAGGTTGCGGGGGCTTTTTATTGCAGATTGAAT
TAGAGCTAAGAACATTGAAA

Product: cytochrome c552

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>467_residues
MMKKMTGKTFALSALVAASFMAAGAMASDKTEPRNEVYKDKFKNQYNSWHDTAKSEELVDALEQDPNMVILWAGYAFAKD
YKAPRGHMYAVTDVRNTLRTGAPKNAEDGPLPMACWSCKSPDVPRLIEEQGEDGYFKGKWAKGGPEVTNTIGCSDCHEKG
SPKLRISRPYVDRALDAIGTPFSKASKQDKESMVCAQCHVEYYFEKKEDKKGFVKFPWDMGVTVDQMEVYYDGIEFSDWT
HALSKTPMLKAQHPEYETWKMGIHGKNNVSCVDCHMPKVTSPEGKKFTDHKVGNPFDRFEETCATCHSQTKEFLVGVTNE
RKAKVKEMKLKAEEQLVKAHFEAAKAWELGATEAEMKPILTDIRHAQWRWDLAIASHGVAAHAPEEALRVLGTSVNKAAD
ARVKLAQLLAKKGLTDPVAIPDISTKAKAQAVLGMDMEKMNAEKEAFKKDMLPKWDAEAKKREATYK

Sequences:
NA

Specific function: NA

COG id: COG3303

COG function: function code P; Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA