| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24375268
GI number:
Start: 3922299
End: 3925478
Strand: Direct
Name: Not Available
Synonym: SO_3774
Alternate gene names: NA
Gene position: NA
Preceding gene: 24375266
Following gene: 24375269
Centisome position: NA
GC content: NA
Gene sequence:
>3180_bases ATGTTCAAAGCGAGTGAAGTGCTGGCAGGCCGCTACGATTCTGCCAATCTCGACGAACTGTTCAAAGCTGTCACCGACAA CTACATTGTCGATGAAGAACAATACTTGTCAGAGCTAATCAAACTAGTCCCCTCCAGTGATGAAGCGATTGAGCGCGTCA CTCGTCGTGCCCACGAACTGGTGAACAAAGTTCGTCAATTTGAGAAAAAAGGCTTAATGGTTGGCATCGATGCCTTCCTA CAGCAATACAGCTTAGAGACTCAGGAAGGTATCATCCTGATGTGTTTAGCCGAAGCCCTACTGCGTATTCCCGATGCGGC CACCGCTGACGCCTTGATTGAAGATAAACTTTCAGGTGCAAAATGGGATGAACACTTAAGCAAGAGCGATTCGGTACTGG TTAACGCCTCCACTTGGGGCCTGATGCTCACCGGTAAAATTGTCAGCTTAGATAAAAAAATCGACGGCAGCTCAAGTAAC CTATTAGGCCGTTTAGTCAATCGTTTAGGTGAACCCGTGATCCGCCAAGCCATGATGGCCGCGATGAAAATCATGGGTAA ACAGTTCGTTCTTGGCCGCACCATGAAAGAAGCGCTTAAGAACAGCGAAGACAAGCGTAAATTAGGTTACACCCACTCCT ACGATATGCTGGGCGAAGCCGCGCTGACGCGTAAAGATGCCGAAAAATACTTTACCGATTATGCCAATGCGATTACCGAG TTAGGCGCGCAAAGCTATAACGAAAGTGAATCTCCACGCCCAACGATTTCAATTAAGTTGTCGGCATTGCACCCACGTTA CGAAGTCGCTAACGAAGACCGTGTACTAACCGAGCTGTATGACACCGTCATTCGCCTAATTAAACTCGCGCGCGGGTTAA ATATCGGTATTTCTATCGACGCCGAAGAAGTTGACCGTCTCGAACTGTCATTAAAGCTGTTCCAAAAACTGTTTAATTCT GAAGCCACTAAAGGCTGGGGATTACTGGGTATCGTTGTTCAAGCTTACTCTAAGCGCGCGCTACCTGTACTGGTATGGTT AACCCGCCTAGCGAAAGAGCAAGGCGATGAAATCCCGGTTCGCTTAGTCAAAGGCGCTTACTGGGATAGCGAGCTTAAAT GGGCGCAGCAGGCAGGCGAAGCCGCTTACCCACTTTACACCCGCAAAGCAGGGACAGACGTATCTTACTTAGCCTGTGCG CGTTACCTGTTATCCGACGCCACCCGCGGCGCGATTTACCCTCAATTTGCCAGCCACAACGCGCAAACCGTTGCGGCAAT TTCCGATATGGCGGGCGATCGTAACCACGAATTCCAACGTCTACACGGTATGGGACAAGAGCTGTACGACACCATTCTGT CGGAAGCGGGCGCGAAAGCAGTACGTATCTACGCCCCCATCGGTGCCCATAAGGATCTGCTGCCCTACTTAGTACGTCGC CTACTGGAAAACGGTGCGAACACCTCGTTCGTGCACAAACTGGTCGATCCGAAAACGCCTATTGAGTCTTTAGTGGTTCA TCCGTTAAAGACATTGACCAGCTACAAAACCCTGGCTAACAACAAAATCGTTTTACCTATCGATATTTTCGGTAGCGATC GCAAAAATTCCAAGGGACTCAATATGAACATTATTTCAGAAGCAGAGCCATTCTTCGCGGCCTTAGACAAATTCAAATCA ACACAGTGGCAAGCGGGTCCTCTGGTTAATGGTCAACCCTTAACTGGCGAGCACAAAACCATTGTTAGCCCATTCGATAC CACTCAAACTGTGGGTCAAGTGGCCTTTGCCGACAAAGCAGCTATCGAACAAGCCGTGTCTTCTGCTCATGCGGCTTTCG GCTCTTGGACCCGTACACCTGTTGAAGTGCGCGCCTCGGCACTGCAAAAGCTAGCGGATCTGTTAGAAGAAAACCGCGAA GAACTGATTGCCCTCTGTACCCGTGAAGCAGGTAAGAGCATTCAAGACGGTATCGACGAAGTGCGTGAAGCCGTCGACTT CTGCCGTTACTACGCAGTACAAGCCAAGAAGCTGATGTCAAAACCTGAACTGCTCCCAGGCCCAACAGGCGAGTTAAACG AACTCTTCCTCCAAGGTCGCGGTGTATTTGTGTGTATCAGCCCATGGAACTTCCCATTAGCGATCTTCTTAGGCCAAGTC TCAGCGGCCCTAGCAGCGGGTAACACTGTGGTCGCAAAACCTGCGGAACAGACGTCAATCATTGGTTACCGCGCAGTGCA GTTAGCACACCAAGCGGGTATTCCAACGGACGTGCTGCAATATCTGCCAGGTACAGGCGCCACCGTTGGTAACGCACTGA CGGCTGATGAGCGCATTGGCGGCGTATGCTTTACCGGTTCAACGGGCACAGCCAAACTGATTAACCGCACGCTGGCAAAC CGTGAAGGCGCGATCATTCCGTTAATCGCCGAAACCGGTGGCCAAAACGCCATGGTGGTTGATTCTACTTCTCAACCAGA ACAAGTGGTTAACGATGTAGTGTCTTCATCCTTCACCAGCGCGGGTCAACGCTGCTCGGCGCTGCGCGTACTCTTCCTGC AGGAAGATATTGCTGACCGCGTTATTGATGTTCTGCAAGGTGCGATGGATGAGCTAGTGATTGGCAATCCAAGTTCAATC AAAACTGACGTAGGTCCAGTGATTGATGCAACAGCCAAAGCCAACCTTGATGCCCATATCGACCACATTAAGCAAGTTGG CAAGCTGATCAAGCAAATGTCTCTGCCAGCGGGCACTGAGAATGGTCACTTTGTAGCGCCAACAGCCGTTGAAATTGATT CAATCAAAGTGCTTGAAAAAGAACACTTTGGCCCAATCCTGCACGTGATCCGTTACAAAGCATCAGAACTTGCCCATGTG ATCGATGAAATCAACAGCACAGGCTTTGGTTTAACCTTAGGTATCCACAGCCGTAACGAAGGCCATGCCCTCGAAGTGGC GGATAAAGTGAATGTCGGCAACGTGTACATTAACCGTAACCAAATCGGCGCGGTGGTTGGAGTACAGCCTTTCGGCGGTC AAGGTCTATCTGGCACAGGTCCAAAAGCCGGTGGTCCACACTACTTAACCCGTTTCGTGACTGAAAAAACCCGCACTAAC AACATCACCGCTATCGGTGGTAATGCGACCCTGCTGTCACTCGGTGATAGCGACGCCTAA
Upstream 100 bases:
>100_bases AGCTTCATATTGTATACAAAATATCAAATGCGTTTCGCGCCCCCCATTTTTGTTTCAACAATAGAGCCCAAAACAACTGG CCAAGATGGAAGCGATTACT
Downstream 100 bases:
>100_bases GCTTGCTCACATCTTCAGCTTTAAGCTAAGACCATTACATAAAGTTAAGGCCAGACACTGTCTGGCCTTTTTATTTCATT AATCAAAATCAAAGTCGTGG
Product: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1059_residues MFKASEVLAGRYDSANLDELFKAVTDNYIVDEEQYLSELIKLVPSSDEAIERVTRRAHELVNKVRQFEKKGLMVGIDAFL QQYSLETQEGIILMCLAEALLRIPDAATADALIEDKLSGAKWDEHLSKSDSVLVNASTWGLMLTGKIVSLDKKIDGSSSN LLGRLVNRLGEPVIRQAMMAAMKIMGKQFVLGRTMKEALKNSEDKRKLGYTHSYDMLGEAALTRKDAEKYFTDYANAITE LGAQSYNESESPRPTISIKLSALHPRYEVANEDRVLTELYDTVIRLIKLARGLNIGISIDAEEVDRLELSLKLFQKLFNS EATKGWGLLGIVVQAYSKRALPVLVWLTRLAKEQGDEIPVRLVKGAYWDSELKWAQQAGEAAYPLYTRKAGTDVSYLACA RYLLSDATRGAIYPQFASHNAQTVAAISDMAGDRNHEFQRLHGMGQELYDTILSEAGAKAVRIYAPIGAHKDLLPYLVRR LLENGANTSFVHKLVDPKTPIESLVVHPLKTLTSYKTLANNKIVLPIDIFGSDRKNSKGLNMNIISEAEPFFAALDKFKS TQWQAGPLVNGQPLTGEHKTIVSPFDTTQTVGQVAFADKAAIEQAVSSAHAAFGSWTRTPVEVRASALQKLADLLEENRE ELIALCTREAGKSIQDGIDEVREAVDFCRYYAVQAKKLMSKPELLPGPTGELNELFLQGRGVFVCISPWNFPLAIFLGQV SAALAAGNTVVAKPAEQTSIIGYRAVQLAHQAGIPTDVLQYLPGTGATVGNALTADERIGGVCFTGSTGTAKLINRTLAN REGAIIPLIAETGGQNAMVVDSTSQPEQVVNDVVSSSFTSAGQRCSALRVLFLQEDIADRVIDVLQGAMDELVIGNPSSI KTDVGPVIDATAKANLDAHIDHIKQVGKLIKQMSLPAGTENGHFVAPTAVEIDSIKVLEKEHFGPILHVIRYKASELAHV IDEINSTGFGLTLGIHSRNEGHALEVADKVNVGNVYINRNQIGAVVGVQPFGGQGLSGTGPKAGGPHYLTRFVTEKTRTN NITAIGGNATLLSLGDSDA
Sequences:
NA
Specific function: NA
COG id: COG4230
COG function: function code C; Delta 1-pyrroline-5-carboxylate dehydrogenase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA