Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24375257

GI number:

Start: 3912378

End: 3914102

Strand: Direct

Name: Not Available

Synonym: SO_3763

Alternate gene names: NA

Gene position: NA

Preceding gene: 24375256

Following gene: 24375258

Centisome position: NA

GC content: NA

Gene sequence:

>1725_bases
ATGCACGAGTCACAATTAACCACTTCGGCGGCTAAACCTAGCCGCCTAGGCTGGTTCGATGATGTCCTATTACTGGGCAT
AATGGCCGTACTCGCCGGGTGCGGTCTTATCTACGAATATCTATTATCCCACTATGCAGGCCGGATCTTAGGCGCACTTG
AGGCTGCCATCTATACCATGATCGGTCTGATGATCGTCTCCATGGGGCTTGGTGCCTTTGCCGCGCGTAAAATTAAGGAT
GCGTTTACCGGCTTTGTGGTGCTCGAACTCACCGTCGCGCTGTGTGGCTCACTCGCGATTTTGATCACCGCAGCAGTGAT
AGGTTTTGGCCAACAATTGCCGATGCTCATCGCCAGCACCTTGGGCTTGCCACCGGATCAACTGCCCGAAGGTGGGATGA
TTGGCACGCTACAAAAGCTTAGCGAATATCTACCTTATTTTTGGGGCGTGCTATTGGGCTTGATGATCGGCATGGAAATT
CCACTGATCGCCAGGGTAAGACAATCCCTTTCAGATGAACACTTACTCCACAATGCGGGCACAATTTACGGCGCAGACTA
TATAGGCGCAGGCATTGGCGCAGCTATTTGGGTCGGCTTTATGCTGGCTATTGATATTCAACTAGCAGCAGCGCTCACCG
CCAGCTTTAACTTGCTAGCAGGGTTTGTGTTTATCTGGCGCTTTTGGCAGAAGATCCAAAGACCTAAATTACTGTTAGCG
GCCCACTTAGTCGTCACTGGTGTATTGCTGCTACTCGCCATTCAAGGGCCAAGCTGGGAGCAACAGTTCAACAATCTGCT
TTATAAAGATAAGGTGGTTTATGCCAAGGCAACACGTTTTCAACAGCTGACCTTTACTGAGCGCCTACGCGGCAATGGCC
TATCCCCCGTATACGCCTTGTATATCAATGGTCGTTTACAATTTTCAAGTAGCGATGAACATATTTACCATGCGTTTTTA
GTTCACCCAACACTTGCGGCTAGCGCTCGTCATAACAAGGTATTAATCATTGGCGGCGGTGATGGACTGGGCCTAAAACA
AGTATTACGCTGGGAGCCTGAGCAAGTGACCCTACTCGACCTTGATGCGGCGCTGGTGCAACTGTTTAAATCCCCCGATC
CTGATATGCCTGAGCGTTTAAGCCAGGCCCTGCTATCACTTAATGGCAATGCGTTTAACGATCCTCGTGTAACGGTAATC
CATGATGATGCCTTTAATGGAGTCGATAAGCTGATTGCTAAAGGGGATAAATATGATGCCATTATTGTGGATTTACCCGA
TCCCAGCCATCCGGATCTGAATAAGCTCTACTCGGATTATTTCTATCGCAAACTGAAGGAACTAATCAGTAATGATGGCG
CTCTGACAGTACAGTCAACGTCACCCTATCATGCGCAAAAAGCTTTTATTTCAGTAGCAAAAACCTTGGCATTGGCGGGA
TTTGATGTAAAACAATATCACCATAATGTCCCTAGTTTTGGCGAATGGGGTTGGAGTATCGCCACCTTAGATGGCAAGGA
TGCTCAACATCGTTTGGCACAGCTGACAAAGCTGCCTATTGCGGATGACTGGCTAACCTTAGGTTTAGTTAAAGGCGCGT
TTGAATTTCCTGCCAATTTTTATCAGGATGCGACCAATATTAAGCCTAATGAGCTGGGGTCATTACAGTTGTACCATTAT
CATCAACAGGCTTGGTCCGAAACCCAAGGACTGGATCTTTTTTAA

Upstream 100 bases:

>100_bases
GATGAAGTCGAAAGACAGCACAATATTGGTATTGCTGCCGTGGAAATGGCCATCAGTATTGCAATCGCACTTATCCTCAC
GGCCCTAATGGCGTAAACGA

Downstream 100 bases:

>100_bases
CGGATAAAGATAGTGCTTGACATATTATGTCTCAGTGCTATCTTTGAACACAGACATAATATGTCAATAAGGACAAATAT
GAATATCCATACTCTTGCTA

Product: spermidine synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>574_residues
MHESQLTTSAAKPSRLGWFDDVLLLGIMAVLAGCGLIYEYLLSHYAGRILGALEAAIYTMIGLMIVSMGLGAFAARKIKD
AFTGFVVLELTVALCGSLAILITAAVIGFGQQLPMLIASTLGLPPDQLPEGGMIGTLQKLSEYLPYFWGVLLGLMIGMEI
PLIARVRQSLSDEHLLHNAGTIYGADYIGAGIGAAIWVGFMLAIDIQLAAALTASFNLLAGFVFIWRFWQKIQRPKLLLA
AHLVVTGVLLLLAIQGPSWEQQFNNLLYKDKVVYAKATRFQQLTFTERLRGNGLSPVYALYINGRLQFSSSDEHIYHAFL
VHPTLAASARHNKVLIIGGGDGLGLKQVLRWEPEQVTLLDLDAALVQLFKSPDPDMPERLSQALLSLNGNAFNDPRVTVI
HDDAFNGVDKLIAKGDKYDAIIVDLPDPSHPDLNKLYSDYFYRKLKELISNDGALTVQSTSPYHAQKAFISVAKTLALAG
FDVKQYHHNVPSFGEWGWSIATLDGKDAQHRLAQLTKLPIADDWLTLGLVKGAFEFPANFYQDATNIKPNELGSLQLYHY
HQQAWSETQGLDLF

Sequences:
NA

Specific function: NA

COG id: COG4262

COG function: function code R; Predicted spermidine synthase with an N-terminal membrane domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA