| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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Identifier: 24375029
GI number:
Start: 3678173
End: 3681679
Strand: Reverse
Name: Not Available
Synonym: SO_3525
Alternate gene names: NA
Gene position: NA
Preceding gene: 24375030
Following gene: 24375028
Centisome position: NA
GC content: NA
Gene sequence:
>3507_bases ATGCTAATCAAAAAACTCACTTTTTGTACATTGCTTGCATTGGCTTCAACGTCAATCTCATCGTTTGGCGATGATACAGA ACTGTATGTAAAAGAATCGTCGACACGCACGGGGGCTAGGCCTAAAGTCTTGGTTATTTTTGATAACTCAGGAAGTATGT CTACCGAAGAAATTACCCAAGTGGTTGATTATGATCCCGATTATGATTATCCCCCTTTAAGTGGCTCGGGTTACAGTGGC GACCGAATCTATTACACCGTTGGTGGCGGTGCATTACCAACGCCCGATACTACTTCTGATAGGCGATATTTTAATGCCAC TATAAATGGTTGTAACCAAAGTAAAGTTGCATTGGATCAATTTGGTCGTTTTACGGGTTATATTCGCGAGTTCACCTCAA GCGGAACAACGGGAGTATGGAAAGAATTTCCCGAGACCGATGGTCGTAACATTAAGGTGGTTGATTGTTGGGAAGATATC TCAACAGTTGATCCTCAAAACTCATCTCCTTACTCTAACGGTTTCCCCGCTAATGGATTAACGACAGGTTCAGGTAAAAA TAAGAAAGCGTTTCCATATAATACTTCTTCATCACCTGGAACTACTTGGGCTAATGCGTTAGCTGCCGCCAAGAATACCG GCTTTGGTGTTGGTCAACCCGTCACTTTTTATACAGACAACTATTTGAGATGGTATTGGTTATCAAAAGAAGGAAGATTG CCAACTATAAAAGTTCCTAGGATAGATATCGCGAAGAAAGCGATTTCTAACATTATTAGATCTACACCAACTGTTGATTT TGGATTGGCTGTTTTTAATTACAATTACCCTAATGAGGGTAATCGGGATGGAGGCAGGATTGTTTCTGGTATTACTCAAA TGACGGATACCTCCCGAGCCAGTTTACTCTCAACTATTGATGGTTTGCCTGCTAAAACAAATACACCTTTGTGTGAGACT ATGTATGAAGCCTATCGTTATTTTGCCGGCAAAGGTGTCGTTTTTGGACACGCGGATACCGATTATGGCTCTTATGTAGG CAATCGTCCTCCATATGATAATTCGGTAGAAACTAATGGTACTTACGTTAGCCCATTTAAAGTTTGTACTGATATTGCCT ATGTGATTTATGTTACCGATGGCTCGCCAACAGTTGATGGAAGTGCCAATAACAATGTTAAAACTCTAACCGCTGCGGCA AGTAAAAGCGGTAATTATTCTTCATTTTCTCAGGGATTAAGTACACCAAGTTATTTGCCTGCATTAGCAAGTTATATGTT TAATAATGATTTGATTAACAAACCTGATAGTTCAAATACTGAGCAAATGCAAAATGTACGGACTTATACTATTGGTTTTA GTAAAGGTGCTGATGATGCTGCGCCATTATTAGCTGAAACGGCTAAACGTGGCGGTGGATTATATTTTGCTGCACAGAAT AGCTTAGAGCTACAAAATGCACTTAATGACGCCTTATCTAATATTTTAAATATAGACTCCAGTTTTACATCTCCCAGTAT TGCTAGTAATAACTTTGATAGAACTCAGACCTTTGATGCCGCTTATTATGCGATGTTCTTACCAGGAAAAGGGCCACGAT GGAGTGGAAATCTTAAGAAACTAAGAGTAACAGCTGATGGCACTTTAGTTGATGGTGAAGGTAATGCAGCCATTGCTGAT AATGGTAATATTAAAGAGACTGCCTGTACGATTTGGACTGATTGTACAAGTCAAAAGGATGGTAATAAAGTTGAGGTTGG TGGTGCAGCCGCGCAACTTAGAGGTCAGTTGAATCGTACTATATTAAGTAATTTGGCGGGGACGAGTAGTTTGTCGCCAC TTACATTATCAAATGCCCAGAATGCTGCTGGAGGAGAGCAAGCATTAGCGACCTTCATGAGAACCGACATTGATGAAGTG GCTAATACTTTAGACTGGCTTAAAGGTATTGATGTAGATGATGATAATAAAAATGGAAGCATTACAGATAAACGTAATGA TGTAATGGGCGATCCCTTACATTCGAAGCCTCTAGCATTGAATTTTGGTAGTGAAACGGCCACGGATATCCGAATTATTT TGGGCACAAACCAAGGTGTTTTACATATGTTCAAAGATGCTGGTGAGTCAGTGTCAGAAACATGGGGATTTATACCCTAT GAGCTTTTACCAAATTTAATCGAGCTTAGAACGAATGACCCATCAGGAGTTCACACTGTATATGGAATGGATTCATCTCC CGTTGCTTATACCGAAACTGATTCTACCGGTAAAGTAAACAAGGCTTGGGTTTTTGTCGGTATGCAGCGTGGTGGTTCAT CTTATTATGCTTTAGATGTGTCTAATCCAGACAGCCCCTCACTTATGTGGACTATTAATCCTTCTAGTGATGGTTTTGTC GATCTAGGTCAGACATGGTCGGAGCCTATCGTGACTAAAATCGTGGGTTACGATAAACCAGTATTAATTTTTGGCGGTGG TTATGACGAGAGCTTTGATGCGACGCCGACTACTTCGCCACAAGGTCGCGCTATTTATATTGTTGATGCACAAAAGGGAA CGCTGATCCATTCTTTTGGCGGTTCGGCTAGTGGGGCAACAGTGCTTCCTGGTATCCAAGGCAGCATTCCTAATTCAGTG GCTGTATTAGATAGTAACAATGATGGTTATACTGACCGTATCTATGCTTCTGATGTTACCGGTAATATATGGCGTATGGA TTTACCTACAGCAAGTTCAGGTACGTGGACCGCTTTTAAGTTTGCTTCATTGGGTGGTTCAAATAGCGATAATAGACGCT TCTTCGCAGAACCCGTAGTTGCGCAAACAATGTTTACCAATTTGTCCGAAGTATCGGTGACAACCGGAACGGAAACTGTG ACAACTAAAACACACCAAAATGTTCCCTATGATGCCGTTGCCGTGGGCAGTGGAATGAGGTCAAGTCCTTCAAGTACTAA CGTTAATGATATGTTTTTTATGCTTCAGGATCGTAACGTCGTCACTAAGAGTTTTACTGGAAGTAATGTACCCGCGACCA TTACTATTAATAATTTGTATGATGTAACATCAAGTGCCCCAACTTCAGAGACGGATAATATTAATTTCGGGACTAAATTT GGTTGGTTTTATGATTTTTCGGGACTCGGTGAGAAAAGCTTGACGGCGGCACTGATTGTTCAAGGAAAAGTATATTTTAC CTCCTATTCACCGCCAGCTGATTCTGTTGCTGATAACGTTTGTTTAGTTTCTGGTGCTGGCAAGCTTTATGCGTTTGATT TACATAAAGGAACCAGATCTTTTTCTCAATTATATTACGAACTTGGAGAAAGAGTTCCTGACACTCCGCAAATTGTGATC CCAGCCCCTGAAACGGGTAAAGATCCTTATATCTATATTATTGGTGTCGGGAAAGGCGATATAAATGAAAATGGTGAATA TAGTGGCACGATAAACGTCGCTTCTGGTTTAGGTGTCAATAAAATTTATTACCATATAGATGAATAA
Upstream 100 bases:
>100_bases AGTCGAGATTAGTAGTACAGCTAATTTTGGTCGCGATAACTTGGGGCAGCTCACCGTTGTCGCAGGTGTAGAGCAAGAAG TTTTAACAGGGAGTTAAGAT
Downstream 100 bases:
>100_bases GTATTTTTATATGAAGATTAAAGATAAAGGTTTTACCTTAATTGAAGTGATGATAGTTGTTGTCATTATTGGAATTTTAT CGGCAATAGCCTATCCCTCT
Product: type IV pilin biogenesis protein, putative
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1168_residues MLIKKLTFCTLLALASTSISSFGDDTELYVKESSTRTGARPKVLVIFDNSGSMSTEEITQVVDYDPDYDYPPLSGSGYSG DRIYYTVGGGALPTPDTTSDRRYFNATINGCNQSKVALDQFGRFTGYIREFTSSGTTGVWKEFPETDGRNIKVVDCWEDI STVDPQNSSPYSNGFPANGLTTGSGKNKKAFPYNTSSSPGTTWANALAAAKNTGFGVGQPVTFYTDNYLRWYWLSKEGRL PTIKVPRIDIAKKAISNIIRSTPTVDFGLAVFNYNYPNEGNRDGGRIVSGITQMTDTSRASLLSTIDGLPAKTNTPLCET MYEAYRYFAGKGVVFGHADTDYGSYVGNRPPYDNSVETNGTYVSPFKVCTDIAYVIYVTDGSPTVDGSANNNVKTLTAAA SKSGNYSSFSQGLSTPSYLPALASYMFNNDLINKPDSSNTEQMQNVRTYTIGFSKGADDAAPLLAETAKRGGGLYFAAQN SLELQNALNDALSNILNIDSSFTSPSIASNNFDRTQTFDAAYYAMFLPGKGPRWSGNLKKLRVTADGTLVDGEGNAAIAD NGNIKETACTIWTDCTSQKDGNKVEVGGAAAQLRGQLNRTILSNLAGTSSLSPLTLSNAQNAAGGEQALATFMRTDIDEV ANTLDWLKGIDVDDDNKNGSITDKRNDVMGDPLHSKPLALNFGSETATDIRIILGTNQGVLHMFKDAGESVSETWGFIPY ELLPNLIELRTNDPSGVHTVYGMDSSPVAYTETDSTGKVNKAWVFVGMQRGGSSYYALDVSNPDSPSLMWTINPSSDGFV DLGQTWSEPIVTKIVGYDKPVLIFGGGYDESFDATPTTSPQGRAIYIVDAQKGTLIHSFGGSASGATVLPGIQGSIPNSV AVLDSNNDGYTDRIYASDVTGNIWRMDLPTASSGTWTAFKFASLGGSNSDNRRFFAEPVVAQTMFTNLSEVSVTTGTETV TTKTHQNVPYDAVAVGSGMRSSPSSTNVNDMFFMLQDRNVVTKSFTGSNVPATITINNLYDVTSSAPTSETDNINFGTKF GWFYDFSGLGEKSLTAALIVQGKVYFTSYSPPADSVADNVCLVSGAGKLYAFDLHKGTRSFSQLYYELGERVPDTPQIVI PAPETGKDPYIYIIGVGKGDINENGEYSGTINVASGLGVNKIYYHIDE
Sequences:
NA
Specific function: NA
COG id: COG3419
COG function: function code NU; Tfp pilus assembly protein, tip-associated adhesin PilY1
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA