| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 24374921
GI number:
Start: 3547932
End: 3551216
Strand: Reverse
Name: Not Available
Synonym: SO_3411
Alternate gene names: NA
Gene position: NA
Preceding gene: 24374922
Following gene: 24374914
Centisome position: NA
GC content: NA
Gene sequence:
>3285_bases ATGAAACTTCGTCACTCAGTTGCCTGCTGCATGCTCGCCCTCGGCACTTTGTCTGCAGCTCAAGTGTTTGCAGCACAATC GACTAGCAATCAAGGTTATTACCGTGCTCCGGCTTTACATGACCAGACCTTAGTGTTTACGGCTGAAGGGGATCTTTGGA CGCAAACCCTCGGCCAAAAGGCGGCGACGCGGTTGACCACCTTACCAGCTGAAGAACTCGGCGCGGCAATTTCTGCCGAT GGTAAATGGGTGGCCTATGTGGCGAATTACGAAGGTGCGAGTGAGGTTTATGTTATTCCCGTGACTGGCGGTGTCGCAAA ACGGGTGAGTTTTGAGAATAGCCGAGTGCGAGTGCAAGGGTGGACCTCTAAGGGAGAAGTGCTTTATTCCACCGACGCTG GTTTTGGCCCCGCGAATAATTGGATGTTGCGTCTTGTTAATCCCGAGAGTTTAACCACAACCGATCTGCCCTTGGCCGAT GCGGTGGAAGGGGTGATCGATGCCAATCATCAGTATGTTTATTTTACCCGTTTCGGCCTGCAGGTGACGGGTGACAATGC GAAGGTGTATCGCGGCGGGGCTAAGGGCGAATTATGGCGCTTTAAACTGGGTGGTAAAGACGAGGCGCAGTTACTCAGTG GACAGCACCAAGGCTCTGTCCGCCAGCCGATGCTATGGCAGGACCGACTCTATTTTATTAGCGATAGCGATGGTAACGAC AATCTCTGGTCAATGGCCCTTGATGGTAGTGATGCTAAACAGCTAACCCAATATAAAGATTGGCAAATGCGCGGGGCGCG CATGGACCAAGGTAACGTTGTCTTTCAACTAGGGGCGGATATTCATGTTTTTGATATCGCCTCTGCTAAGGATTCATTAT TAAACATTGAATTAATTTCAGATTTTGCCCAGCGCCGCGAACATTGGGTAAAAGATCCTATGGATTATGCTACCTCCGCT AATCTTGCCCTTGCTGGCGATAAAGTCGTTATTACTGCCCGTAGCCATGTGGCTATTACTGGGATTGATGGCTCGCGGTT AGTGCAAGTGGCGCTTCCTGGTACTTACAGAGTACGAAATGCCATCCTGAGTCAGGATGGCAAATCGGTTTATGCCATCA GCGATATGACTGGCCAGCAGGAAATTTGGCAATTTCCTGCTGATGGAACCAGTGGTGCTAAACAGTTGACCAAGGATGGC CATACCTTAAGAATGTCGCTGAGTTTATCTAACGATGGTCGCTATCTTGCCCATGACGATAACGACGGTAGTGTGTGGTT ATTGGATCTAAAGAAAAATACCAATCAAAAAATCATTAGTAATGGTGAAGGCCTTGGTCCCTATGCCGATATCCGTTGGT CCGGCGACAGCCGTTTTATCGCACTAACTAAATCTGAAATCGGTAAGCAAAGGTCGCAAGTCGTGCTTTATTCGGTGGAT GAAAATAAGGCGCAAGCGCTCACCAGCGATAAATATGAATCCTATTCGCCGACCTTTAGCAGCGATGGCCAGTGGTTATA TTTCCTTTCTAATCGCCAGTTTACCGCAACCCCAAGCTCGCCTTGGGGGGATCGCAATATGGGGCCCGTTTTTGATAAAC GTAGCCAGATTTTTGCGATTTCTTTAGTGAAAAATGCCAAGTTCCCCTTCAGCAAACCAACTGAGTTGACGGCAAAAACG GCTGAAAAAGCCGAATCGAAAGATAAACCGACTCCCGTAAAAATTGATTGGGCGGGGATCAGTGAGCGTCTATGGCAAGT CCCAGTCGATTCAGGCAATTATAGCCAGCTATCTGCTATTGAAGATCGTTTGTATGTACTTGACCAAGCTATTGGTGACG AAAGCCAACCTAACCTCATGACGGTTAAGTTTACCGAGCAGCGTCCTAAAGCTGAGGTGTTTGCTGAAGATGTGGCTAAC TACAGTGTCTCAGCTGACGGTAAGAAGTTGTTACTGCGCAAAAAAAGCAATGAAAAGTCGCTGATAATTGTTGATGTGGG CGATAAGTTGGGTGATACCGACAATGCCAAGGTACAGACTGACCAGTGGCAATTAGTAATTTCGCCAACCTTAGAGTGGC AACAAATGTTTGAAGATGCATGGTTAATGCATCGAGATTCTTTCTTTGACAAAAATATGCGCGGTCTCGATTGGCTGGCG ACTAAGGCCAAGTATCAACCACTGCTCGATCGCTTAACTGACCGTAATGAATTAAACGACATCTTTATGCAGATGATGGG CGAGTTAGATTCACTGCACTCGCAAGTGCGTGGCGGTGATTTGCCTAAAGATCCTGATGCTGCGAAAGGGGCGAGTTTAG GCGCGCGGCTGCAACAAACCAGCGATGGGGTGAAAATTGCCCATATTTATCGTAATGATCCCGAACTGCCGAGCCAAGCT TCACCCCTAAGCCGTATCGAAGTCGATGCCAAAAAGGGCGATCAGTTACTTGCCATTAATGGCACGCCTGTGACCAATGT TGCCGACGTGACGCGTTTATTACGTAATCAGCAGGATAAACAGGTTCTGCTAGAGCTTAAGCGCGGCGGGCAAAGCCATA AAACTGTGGTAATGCCAGTTAGCACTATGGTCGATAGTCAGTTACGTTATTTAGATTGGGTCAACCATAATGCCAGCGTT GTGACTGAGGCGAGTAAGGGCAAGATTGGTTATCTGCACTTATATGCCATGGGCGGCGGCGATATTGAGAGCTTCGCCCG TGAGTTTTACACCAACTATGACAAAGACGGTTTGATTATCGACGTACGTCGTAACCGCGGCGGTAATATTGATAGCTGGA TCATCGAAAAATTATTACGCCGAGCTTGGGCTTTCTGGCAGCCAACCCATGGCACGCCCAATACCAATATGCAGCAAACC TTCCGTGGGCATTTAGTGGTGTTAACGGACGAGCTGACCTACTCCGATGGCGAAACTTTCTCTGCGGGGATCAAGGCACT AGGAATTGCACCGCTGATCGGTAAACAAACTGCCGGGGCGGGTGTATGGCTATCGGGTCGTAATACCTTAACCGATAAAG GGATGGCGCGAGTTGCTGAATATCCACAATATGCCATGGATGGACGCTGGATTCTTGAGGGACATGGTGTTACGCCGGAT ATTGAGGTCGATAACTTACCCTTTGCCACTTTTAATGGCCAAGATGCACAGCTTGAAACCGCCATTAGTTATCTGAAGGA TGAGTTAATAAAGCAGCCGATTCCTGCATTGAAGGCACAACCAATGCCAGCTAAAGGTATGGCAGAAGATATAAAAGCTA AGTAG
Upstream 100 bases:
>100_bases TAGCTTGTTGAATTATTTTCTCAGACTTTGGGCAATTGTTGGTAAATTATGCCCACTTGAAAGTCCATTGCTAACAATAA CAATAGGATAGAGACTACAC
Downstream 100 bases:
>100_bases CTAGCTTTTAAATGAATTTAACTGAAATTTAAGTTAATTCAGTTAAGCTAACCCTGTTCAATGTTTGGGCGTTGTCTGGT AGTTCCCAAGACAACGCCCA
Product: protease, putative
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1094_residues MKLRHSVACCMLALGTLSAAQVFAAQSTSNQGYYRAPALHDQTLVFTAEGDLWTQTLGQKAATRLTTLPAEELGAAISAD GKWVAYVANYEGASEVYVIPVTGGVAKRVSFENSRVRVQGWTSKGEVLYSTDAGFGPANNWMLRLVNPESLTTTDLPLAD AVEGVIDANHQYVYFTRFGLQVTGDNAKVYRGGAKGELWRFKLGGKDEAQLLSGQHQGSVRQPMLWQDRLYFISDSDGND NLWSMALDGSDAKQLTQYKDWQMRGARMDQGNVVFQLGADIHVFDIASAKDSLLNIELISDFAQRREHWVKDPMDYATSA NLALAGDKVVITARSHVAITGIDGSRLVQVALPGTYRVRNAILSQDGKSVYAISDMTGQQEIWQFPADGTSGAKQLTKDG HTLRMSLSLSNDGRYLAHDDNDGSVWLLDLKKNTNQKIISNGEGLGPYADIRWSGDSRFIALTKSEIGKQRSQVVLYSVD ENKAQALTSDKYESYSPTFSSDGQWLYFLSNRQFTATPSSPWGDRNMGPVFDKRSQIFAISLVKNAKFPFSKPTELTAKT AEKAESKDKPTPVKIDWAGISERLWQVPVDSGNYSQLSAIEDRLYVLDQAIGDESQPNLMTVKFTEQRPKAEVFAEDVAN YSVSADGKKLLLRKKSNEKSLIIVDVGDKLGDTDNAKVQTDQWQLVISPTLEWQQMFEDAWLMHRDSFFDKNMRGLDWLA TKAKYQPLLDRLTDRNELNDIFMQMMGELDSLHSQVRGGDLPKDPDAAKGASLGARLQQTSDGVKIAHIYRNDPELPSQA SPLSRIEVDAKKGDQLLAINGTPVTNVADVTRLLRNQQDKQVLLELKRGGQSHKTVVMPVSTMVDSQLRYLDWVNHNASV VTEASKGKIGYLHLYAMGGGDIESFAREFYTNYDKDGLIIDVRRNRGGNIDSWIIEKLLRRAWAFWQPTHGTPNTNMQQT FRGHLVVLTDELTYSDGETFSAGIKALGIAPLIGKQTAGAGVWLSGRNTLTDKGMARVAEYPQYAMDGRWILEGHGVTPD IEVDNLPFATFNGQDAQLETAISYLKDELIKQPIPALKAQPMPAKGMAEDIKAK
Sequences:
NA
Specific function: NA
COG id: COG0793
COG function: function code M; Periplasmic protease
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA