Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is cydA

Identifier: 24374797

GI number:

Start: 3426141

End: 3427697

Strand: Reverse

Name: cydA

Synonym: SO_3286

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374798

Following gene: 24374796

Centisome position: NA

GC content: NA

Gene sequence:

>1557_bases
ATGATTGTTGAAGAGGTTGTTGAGCTATCGCGGCTACAGTTTGCGCTGACAGCCATGTATCACTTCCTATTTGTTCCCTT
AACATTGGGGTTAGCATTTTTGCTAGCTATCATGGTATCACTTTATGTGATGACAGATAAACACATTTATAAAGATATGA
CTAAGTTCTGGGGTAAGTTGTTTGGTATCAACTTTGCCTTGGGTGTTTCAACAGGTTTAGCGATGGAATTCCAGTTTGGT
ACTAACTGGTCTTATTATTCGCATTATGTAGGTGACATTTTTGGTGCACCACTGGCCATTGAAGGTTTGATGGCGTTCTT
CCTTGAATCAACCCTCGTGGGTATGTTCTTCTTTGGTTGGGACCGTTTCAGCAAGCGCCAACATTTGGCGGTCACTTGGC
TGGTTGCGCTAGGTTCTAACCTATCTGCTCTGTGGATCCTGGTGGCAAACGGTTGGATGCAAAACCCTGTTGGGTCAGTA
TTCAATTACGAAACCATGCGTATGGAAATGACCAGCTTTGCCGAAGTCGTCTTTAACCCTGTTGCACAGGTGAAGTTTGT
TCACACTGTGGCTTCTGGTTATGTCACTGGCGCAATGTTCGTGTTAGCGATCAGTTCTTACTACATTCTGAAGAAACGTG
ATTTACCTTTTGCACGTCGCTCATTTGCGATTGCTGCAAGCTTTGGTATGGCTGCTATCCTGTCAGTTATCGTTCTGGGT
GACGAATCAGGCTACAAAGTGGGTGAGGCGCAACGCGTTAAATTAGCCGCGATTGAAGCTGAGTGGCACACTGAGCCGGC
TCCTGCTGCCTTTACTGCGGTTGGTTTCCCTAATCAAGAAACCATGGAAACTGACTTTGCAGTAAAAATTCCTTATGCGA
TGGGTATCGTAGCAACGCGTTCTTTAGATGAACAAGTAACAGGTATTCATGACTTAATTAGCGAGCACGAAGTGCGTATT
CGCAATGGTATGAAAGCCTATGCAATGCTAGTTAAACTGCGTGCTGGTGATACCTCCCCTGAATTACGCGCTGAATTTGA
AGCGGCAAAAGTAGACTTAGGTTATGGCTTACTGCTGAAGCGTTATACCAATAACGTGGTTGATGCGACTGAAGAGCAAA
TTAAAGCTGCTGCTAAGGATTCTATCCCCAATGTCGCGCCTATGTTCTGGAGCTTCCGTGTCATGGTTGGCCTAGGTTTT
GTCATGCTGTTCGTGTTCGCAGCGGCATTCTGGCAAAGCACGCGTCACCAGATCGAAGAGAATAAATGGGTACTTAAAGC
GGCGCTCTTTAGCTTGCCATTACCTTGGATTGCGATTGAGTGTGGTTGGTTTGTGGCTGAATATGGCCGTCAACCTTGGA
CCATCTCTGAGGTTCTGCCAACCTTTATGTCTGCGTCTAGCTTAACGACTGGCGATTTGTGGTTCAGTATCATCTCGATT
TCACTGTTCTACACTGTGCTGCTAGTGATCGAGATATTCTTGATGCTTAAGTTTGCCCGTCTTGGACCCAGCAGTTTAAA
GACTGGTCGTTATCACTTCGAGAAATTAGAAGCCTAA

Upstream 100 bases:

>100_bases
GCTATAAACACAAAATGAAAACTCACTATCCTACAAAGGCACTTGCTATGAATGGCTCATGTTGTCGTAGCAATTGGACG
CACCACGTAAGGAGTCACCG

Downstream 100 bases:

>100_bases
GCAGAGGATTTCATTATGTTTGATTATGAAATGTTGAGAGTAATCTGGTGGGCTCTGATCGGCGTACTGTTCATCGGATT
TGCGGTCACAGACGGTTTTG

Product: cytochrome d ubiquinol oxidase, subunit I

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>518_residues
MIVEEVVELSRLQFALTAMYHFLFVPLTLGLAFLLAIMVSLYVMTDKHIYKDMTKFWGKLFGINFALGVSTGLAMEFQFG
TNWSYYSHYVGDIFGAPLAIEGLMAFFLESTLVGMFFFGWDRFSKRQHLAVTWLVALGSNLSALWILVANGWMQNPVGSV
FNYETMRMEMTSFAEVVFNPVAQVKFVHTVASGYVTGAMFVLAISSYYILKKRDLPFARRSFAIAASFGMAAILSVIVLG
DESGYKVGEAQRVKLAAIEAEWHTEPAPAAFTAVGFPNQETMETDFAVKIPYAMGIVATRSLDEQVTGIHDLISEHEVRI
RNGMKAYAMLVKLRAGDTSPELRAEFEAAKVDLGYGLLLKRYTNNVVDATEEQIKAAAKDSIPNVAPMFWSFRVMVGLGF
VMLFVFAAAFWQSTRHQIEENKWVLKAALFSLPLPWIAIECGWFVAEYGRQPWTISEVLPTFMSASSLTTGDLWFSIISI
SLFYTVLLVIEIFLMLKFARLGPSSLKTGRYHFEKLEA

Sequences:
NA

Specific function: NA

COG id: COG1271

COG function: function code C; Cytochrome bd-type quinol oxidase, subunit 1

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA