Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24374706

GI number:

Start: 3331303

End: 3334068

Strand: Reverse

Name: Not Available

Synonym: SO_3193

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374707

Following gene: 24374705

Centisome position: NA

GC content: NA

Gene sequence:

>2766_bases
GTGTTACAACAACTTAAAAAATACATCAAAGCGGCCAATCGAGTCGCGATATTCGCAGGCATGAGTGCTGCAATATTGAT
GGGCGCTCAGGCGCAAGCCGTTACGCCCTCTCCGCAGATGATTGAACAATTCAAACAATTACCCAAAGCTGAACAACAGC
GCTTAGCAAGACAATACGGAATTGATCCCAGTATGATTTCCGGTAGTCAAGCACAGCCGCAGATAGCAAATCCGCAGGTT
GTTTCTGAGCGTGACATGCAATCTGAACGCTCCGATGCAACAACCGATAAAAAAGAAAAGGCAGAATTAGATTTCTCTGT
GGATTCTTCCAACCTCAAGCTTCGTCGTTTTGGTTATGAAATGTTTGCGGGTGAGCCAAGTACATTTGCACCAGTGTCTG
ATGTGCCTGTACCTGGGGAATATCTTGTTGGTCCAGGCGATAACATCAAAATACAGCTTTATGGGAAAGAGAATAAAGAA
TACGACCTAGTGATTAATCGCGAAGGAGTGATTCAATTCCCTGAGTTAGGCCCTATCCCTGTAAATGGTTTAACGTTTTC
AGAGTTAAGAGAAACGCTGGCGCAGCGTATTCAACAACAAATGATTGGAATTGAGTCCAATATCACCATGGGTGAATTGC
GCTCTATTCGTATATTTGTGGCGGGTGATGCTTACAAACCTGGTTCATACACCGTTTCTAGCTTATCGACTATCACCCAA
GCGTTATTTGTTGCAGGTGGCGTTAACGAAATCGGCTCACTGCGTAATGTGCAATTGAAACGTAATGGCAAGCTTGTTGG
CACCTTGGACTTATATGACCTGCTGCTAAAAGGTGACGCATCAGGCGATCAACGCTTACGTTCTGGTGATGTCGTCTTTA
TTCCTTCAATTGGTGGCCTCGTTAGCGTTTCTGGCGAAGTAAGACGCCCAGCCATTTATGAGTTAAAAAATAATGAATCC
ATGGCTGATGTTATTGCTATGGCTGCGGGGTTAAATCCTGGCGCGTATCCAAAAAGCAGTTCAGTCGAGCGTTATAACAG
CAAATCGTTAAAAACAGTCATCAACGTCGACCTCACTAGCGAACAGGGCAAAATGACATTGGCCAAGGCGGGTGATGTTA
TTCATGTTAAAAACGCTTCTGAGCAGTTTGAAAGTGCTGTAACTGTAGTCGGTGCCGTTGTGCGCCCTGGTAAATATCAA
TGGTTTGCGGGGCAAAAAATCAGTGATGTTTTTCCCTCAATTTGGGGTGATTTAGCCATTTCAGCTGATTTAGATTATGG
CTTAGTGGTTCGCGAAGTGAACCAATATGGTGATATTGAAGTTCGTCAGTTTTCACCGGGTAAAGCGATTAGCAATAAAA
ACAGTGACCAAGATATTGAGCTAAAAGCCCGTGATAAAGTCATCGTGTTTAATTTTTCTGACGATGTACAAAATCGTTTC
GAGCTGAATAAGTTAGTTAAACAGCGCGTTGAGAAGGTGACTTCCTTAAATACCAATACGCTGATCAGTTCTGATTTATT
CAAAGCGGGATTTGTCCAGCTTGATAAGAGCAGATTAACCCAGCGTACACAGTTGGCTGGTGTTGTTGTAACCGACAAAA
CCGAGTCAGAAGATGTTGCTGTGGTTAAAGGTGTCGTCAACAAAATGCTGGCGAATTTATTTGATGATGCAGAGTTACTC
AAGCTGAGTAATCAAATGGCACGCCAAGAATTGCTCTATCCGGTGATGGTTAAGCTTAATAATCAGGGCCGAGCAGGGGC
AGGGATTCAAGTTGTCGGAGTCGATGGTCAGGTACGTTTACCAGGTCTTTATCCACTAACCTCTGGTGCGAAAGTTAATG
ACTTAATTGTTGCGGCAGGCGGCTTAAAAGAAGGCGCCTACACAACCAGAGCCGAATTAACATCAACGGTAGTTGATAAT
TCAGGCTCAAAAACTGAGCACAAAAATATCGACCTTGCTCTAGCACTGCAAAATAACTCAAGTGCCAATTTAATGTTATC
CGGCAGAGATATTCTTACCGTGATGACCACGCCTGATTGGCAAGAGACCAAAGTGGTTGAGGTAAGAGGCGAGGTTAAAT
TCCCTGGTCGTTACAATATTCGCCGTGGTGAAACTTTAAGCGACTTAATCACCCGAGTGGGTGGTTTTACCGACTATGCT
GCATTACCTTCAGCAGTCTTTGTGCGTGAATCTGTGCGTCAACAAGAACAGATTGAAATCAAAAAGCTGGCAGACCAACT
GCGTCGCGATATCGCTACCCGTGGGATTTCAAAGGATGGTACGGTGGTTAATTATGCCGATGCGCAATTAATGCTAGCTG
ACCTTGAAAATATTAAAGCGGTTGGCCGTTTAGTTGTCGATTTACCCGCAATTTCACTCGGTATTACTCAGGCGGATTTG
CAGTTAGAAGATGCTGACATTTTATATGTCCCTTCAACTAAGCAAACAATTGCGGTAATGGGTGAAGTTCAACATCCCGC
CACCCACAGATTTAAAGACGGATTAACGATAGACCAGTATCTAGCAATGTCAGGCGGTGCAAGAGAGCGTGCTGATGCCG
GTCGAACTTACGTTATTCAAGCAAATGGTTCGGTATTGATGCCATCACGCTCAAGCTGGTTTAGCAGTGGTGAACAATTA
CAACCGGGTGATACTGTGATTGTGCCATTAGATACCGAATATAAAGATAATCTAACTCTTTGGACGCAAGTGACAGGCAT
TATCTATAACACCGCTGTCGCTATCTCAGCCATCGCAGGCTTGTAA

Upstream 100 bases:

>100_bases
ACGCAGCAAAGAGCGCTGCTCTAGGACCTAGAATCTAGAAGGGCGTAGCCCGCACTGCTTTATCATTGTTTTTCATCTTT
AACCCAATCGGAGATATCTG

Downstream 100 bases:

>100_bases
AACGAAGATGATAGGTCGCTGCTTCGCCGCTGCTAGAACGCTTCACTCTAGGACGCAGCAAAAAACGCTGCTCTAGGACG
CTTCGCGCTAGAACGCCACT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>921_residues
MLQQLKKYIKAANRVAIFAGMSAAILMGAQAQAVTPSPQMIEQFKQLPKAEQQRLARQYGIDPSMISGSQAQPQIANPQV
VSERDMQSERSDATTDKKEKAELDFSVDSSNLKLRRFGYEMFAGEPSTFAPVSDVPVPGEYLVGPGDNIKIQLYGKENKE
YDLVINREGVIQFPELGPIPVNGLTFSELRETLAQRIQQQMIGIESNITMGELRSIRIFVAGDAYKPGSYTVSSLSTITQ
ALFVAGGVNEIGSLRNVQLKRNGKLVGTLDLYDLLLKGDASGDQRLRSGDVVFIPSIGGLVSVSGEVRRPAIYELKNNES
MADVIAMAAGLNPGAYPKSSSVERYNSKSLKTVINVDLTSEQGKMTLAKAGDVIHVKNASEQFESAVTVVGAVVRPGKYQ
WFAGQKISDVFPSIWGDLAISADLDYGLVVREVNQYGDIEVRQFSPGKAISNKNSDQDIELKARDKVIVFNFSDDVQNRF
ELNKLVKQRVEKVTSLNTNTLISSDLFKAGFVQLDKSRLTQRTQLAGVVVTDKTESEDVAVVKGVVNKMLANLFDDAELL
KLSNQMARQELLYPVMVKLNNQGRAGAGIQVVGVDGQVRLPGLYPLTSGAKVNDLIVAAGGLKEGAYTTRAELTSTVVDN
SGSKTEHKNIDLALALQNNSSANLMLSGRDILTVMTTPDWQETKVVEVRGEVKFPGRYNIRRGETLSDLITRVGGFTDYA
ALPSAVFVRESVRQQEQIEIKKLADQLRRDIATRGISKDGTVVNYADAQLMLADLENIKAVGRLVVDLPAISLGITQADL
QLEDADILYVPSTKQTIAVMGEVQHPATHRFKDGLTIDQYLAMSGGARERADAGRTYVIQANGSVLMPSRSSWFSSGEQL
QPGDTVIVPLDTEYKDNLTLWTQVTGIIYNTAVAISAIAGL

Sequences:
NA

Specific function: NA

COG id: COG1596

COG function: function code M; Periplasmic protein involved in polysaccharide export

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA