Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 24374372

GI number:

Start: 2960659

End: 2963715

Strand: Reverse

Name: Not Available

Synonym: SO_2843

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374373

Following gene: 24374371

Centisome position: NA

GC content: NA

Gene sequence:

>3057_bases
ATGAAGCCACTACAACTTTCCATGTCGGCTTTTGGCCCGTTTGCTTCGACTCAGACAATTGATTTTACTGAACTTGGTGA
TAATCCGTTATTTTTGATCAACGGGCCAACTGGCGCGGGTAAAACGACTCTGCTCGATGGTATCAGCTTTGCGTTGTATG
GAAAAACCACCGGCAATGAACGTGAAGGCAGCCAAATGCGTTGCGATATGGCCGATGACAATCTGCTTACTGAGGTGACC
TTTAGTTTTAAATTGGGTAACACCGCGTATCGTATTCGCCGAGTGCCCGAGCAGGACAGACTCAAAAAGAATGGCGAGGG
TTCGACAGTCCAAAAGAGCGAGGCGCAGCTGTTTAAGATCGCTCCCGATGGTACTGAAACCCTATTAGTCGCTAGTAAAG
TATCAGAGGCAACGGCTGAAATTGAAGCGTTAACGGGCTTAGACGTAGAACAATTTCGTCAGGTTATGGTGCTGCCGCAG
GGGAAGTTTCGTGAATTACTCATGGCTGACTCCAAGGCGCGTGAGCAAATTTTTAGTCAATTATTTCAAACCCATATCTA
TAAACGTATTGAAGATATCTTAAAGGCGAAGGCGGCCGACATCCGCGCCTTGGTAAAAGAGCAGCGTGCGCGTCGCGATG
GCATTTTACAAACCGCTGAGCTAGCGAGTGACGACGAACTTGCCGCCGAGTTTAGTCGAATAGAACCCGAATTGGCGGCT
GCTATAGTCGCGAAAGAACGTAGCACGGCGGCGCATCTACAGGCGTTAAAACAGCATGACAGTGCGCAGCAACGTTTTGC
TGAATTTACCCGTTTAAGTGAATTGGAATCCCAAGCCACTTTGCTTCATGAACAGCAAGCTGATATTGCAGCGCAAACGG
CTCGCCTGAATGTGGCAAAGCAAGCGCAGCGTCTAAAGCCCTTATTGGATAATGCGTTATCGAGGGAGCAGGAAGCGACG
ATTGCTAATGATCAGCGCAGCCGCGCCCAAATGGTACTCGATGCGGCAAAGCTTGCGCTTGCCAAAGCTGAAACCGAAGC
GCAAGAGCTTAACGGCCTAGAACCGCGCTTACGAACTCAGGAGCAACTGGCTAACAGCTTAACGTCACTAGCACCGCAAT
TGGCTGAGTTTGCCGATGTAGAGCAAGCATTGGCTAAGGCAAACATCTTATTGCAACAAACCAAAGTGCAGGGGCAAGAG
ACTAAGACGGCGCTTGCAAGCTTAGTTGAGCAGCGCAGCACCTATGAAAATCAATTGCCAGCATTACAACAGCAAAGTGA
GCGTCAACTCGCGACTGCACAAGCCTTGCAGCAACAGCGCCACTTACTTGAGTTGTTCAAACAATGGCAACAAATCTGCG
TCAAAGTCGCCCAAACTGAAGAGGCGCTTGTACTGGCAGGATTACAAGGAAAGACGCTGAACGCGCAGCATCAGGCAGCG
CTAAGTGACTATAAGTCTTTACAGCTCAGTTGGTTTCAAGGCCAAGCGGCCATTTTAGCGAGGGAGCTCAAACTCGAAGA
ACCCTGCCCAGTTTGCGGCAGTATCGAGCATCCTCATCCTGCAACCAGTCATGATAATTTACCAACGGACGCACAGCTAC
AAGCTGCGCAGAATGCCGAGGTCAATGCACTCGAACAACTCAGCAAAGCGAGGGCGGAGTATCGGGGGTTACAAAAACAG
TTAGAAGCACAGCAATTGCAGGCAAATGAACTGGCCTCCTCGCTGGGAGATGCGGTTGAGCTACCACTCGAATCGCATAT
CCAACAGCTCGAGGAATTAACACGCCACGCAAAACAAGCGGAAGTGGCCACCCAAGCATTGCAGCAGTTACAGCAGCAAA
TCAAAGCGTTGCAGCAGCAAGAGTTAGGATTGACGCAACAATTAGAGCTTGAGCGTGAGCGGTATCATCAACAAGAAGGC
GAAGTGGCGCGTTTATCTGGCCAATTAGCGGAAAAGGCGCTTCGGATCCCTGACGAATACCGCTCGCTTACTGCGTTAAA
TCAAGCGATTAATGATAATCAGCAGCAGCTTGAGAAGACTCGTGGGCTAATTCATGCCCTTAGAACCGCACAGCAGCAGG
CATCCGAGCATTGTGTGGCAGCGCAAACGGCGCTAGAGGCTGCGATACAACGCTGTCATAGCGCAGATGAGCTGCAGGCT
CTGGCTTTGGGCGACCTTAACTCACAACTGCATTTAGCGGGTTTTACTGATAGGGACGCATTAGGGGCTGCATTGTTAGC
CGATGAGCAAATGCAAGCGCTGGGCGAGCGTATTGAAACCTATCAGCGTCAGTGCGCCCTAAATCAGTCACAGCTTGCTC
AGCTAAAAACTCAGCTTAGTGATGTCAGCGTGCCCGATCTCGATGCCCTAGAAGCTATGCTCGCAGAAAAGCGTCAACAA
CTTAACATCGCGGAAGTGGCATGGAGCCAACTCAATACTCGGTTCTCTTTGCTTAAACAAACTCAAACACAGCTCAGTAT
CGTCGATCAAAAAGCGAAAGCCCTTGAGGATGAATACGCCATTATTGGCACCTTGGCCGATGTGGCCAATGGGAATACCG
GCAACAAGATTTCCCTGCAACGTTTTGTATTAAGTGTCTTACTCGATGATGTATTACTCGCCGCGACGCAGAGATTACAC
CTGATGAGTAAAGGTCGATATCGATTACTACGCAAAGAAGACAGAGCAAAGGGAAATAAGGCATCAGGGCTTGAACTTGA
AGTCGAAGACGCTTACACCGCAAAAGTGCGCCCTGTGGCGACCTTAAGTGGAGGGGAGAGTTTTATGGCAGCCTTATCCA
TGGCACTGGGTTTATCAGACGTGGTGCAAGCTTACGCGGGGGGCATAAAACTCGATACGTTATTTATCGACGAAGGTTTT
GGCAGCCTAGATCAGGACTCCCTCGAGCTGGCAATTCGCACCTTAATGGATTTGCAATCCGCAGGAAGGATGATCGGCGT
GATATCTCATGTTTCTGAGATGAAAGAGCAGATAAATACCCGAATTGATCTCTTGAAAACTTCCCATGGGAGTGAAATCA
AAGTGATTTTGCCTTAG

Upstream 100 bases:

>100_bases
CGGCGCAGCAGGCGGTGATGGAGGATATCCTAACCCAACTTCATCGAGACGGGCTCGAACGCAGCGAAACACATCGTGAC
GTAAAAGAGGAGCAGGCAGA

Downstream 100 bases:

>100_bases
AAGCATTTATGTGTAGAGTGCGTTTTTTAACTTGTTGTTTTATAAAAATTTTACTTATATTGCTGTAATATTTTACAACT
GGATATAGAACGCACAATCA

Product: exonuclease SbcC, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1018_residues
MKPLQLSMSAFGPFASTQTIDFTELGDNPLFLINGPTGAGKTTLLDGISFALYGKTTGNEREGSQMRCDMADDNLLTEVT
FSFKLGNTAYRIRRVPEQDRLKKNGEGSTVQKSEAQLFKIAPDGTETLLVASKVSEATAEIEALTGLDVEQFRQVMVLPQ
GKFRELLMADSKAREQIFSQLFQTHIYKRIEDILKAKAADIRALVKEQRARRDGILQTAELASDDELAAEFSRIEPELAA
AIVAKERSTAAHLQALKQHDSAQQRFAEFTRLSELESQATLLHEQQADIAAQTARLNVAKQAQRLKPLLDNALSREQEAT
IANDQRSRAQMVLDAAKLALAKAETEAQELNGLEPRLRTQEQLANSLTSLAPQLAEFADVEQALAKANILLQQTKVQGQE
TKTALASLVEQRSTYENQLPALQQQSERQLATAQALQQQRHLLELFKQWQQICVKVAQTEEALVLAGLQGKTLNAQHQAA
LSDYKSLQLSWFQGQAAILARELKLEEPCPVCGSIEHPHPATSHDNLPTDAQLQAAQNAEVNALEQLSKARAEYRGLQKQ
LEAQQLQANELASSLGDAVELPLESHIQQLEELTRHAKQAEVATQALQQLQQQIKALQQQELGLTQQLELERERYHQQEG
EVARLSGQLAEKALRIPDEYRSLTALNQAINDNQQQLEKTRGLIHALRTAQQQASEHCVAAQTALEAAIQRCHSADELQA
LALGDLNSQLHLAGFTDRDALGAALLADEQMQALGERIETYQRQCALNQSQLAQLKTQLSDVSVPDLDALEAMLAEKRQQ
LNIAEVAWSQLNTRFSLLKQTQTQLSIVDQKAKALEDEYAIIGTLADVANGNTGNKISLQRFVLSVLLDDVLLAATQRLH
LMSKGRYRLLRKEDRAKGNKASGLELEVEDAYTAKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSAGRMIGVISHVSEMKEQINTRIDLLKTSHGSEIKVILP

Sequences:
NA

Specific function: NA

COG id: COG0419

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA