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The map label for this gene is rne

Identifier: 24374321

GI number:

Start: 2906071

End: 2909337

Strand: Direct

Name: rne

Synonym: SO_2785

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374320

Following gene: 24374325

Centisome position: NA

GC content: NA

Gene sequence:

>3267_bases
ATGAAACGTATGTTAATCAATGCAACTCAATCAGAAGAGTTGCGTGTTGCCCTCGTTGACGGGCAACAACTGTACGACCT
CGATATTGAAAGTCCTGGTCATGAGCAAAAAAAATCTAATATTTACAAGGGTAAGATCACCCGCGTAGAACCCTCTTTAG
AAGCCGCTTTCGTTGACTATGGTGCTGAGCGCCACGGCTTTTTACCACTTAAAGAAATCGCCAGAGAATATTTCCCTAAA
GGCTATTCTTTCCAAGGTCGCCCGAACATCAAAGAAGTGGTCAGTGAAGGACAAGAAGTCATTGTTCAAATTGACAAAGA
AGAACGCGGCAACAAAGGTGCGGCGCTGACCACCTTTATCAGCCTTGCTGGCTCTTATTTAGTGTTAATGCCGAACAACC
CTCGTGCAGGCGGCATTTCTCGCCGTATCGAAGGGGATGAGCGCACTGAATTAAAAGAAGCCATGGCCGATTTAGAAGTC
CCTGCTGGAATGGGCCTTATCGTCCGTACTGCTGGTGTGGGTAAAGAATCGACCGAACTAAAGTGGGACTTAAAAGTTCT
ACAACACCATTGGGCTGCCATCACTGAAGCAGCGCAAACCAAAGGTGCGCCTTTCCTCATTCACCAAGAAAGTAATGTCA
TTGTTCGCGCAATTCGTGACTATTTACGCCGAGATGTGGGTGAAATTTTAATCGACCATCCACGTATTTACGAAGAAGCC
AAACAACACATTGCCCTTGTGCGCCCAGACTTTGTTGAGCGAGTAAAGCTCTACGAAGCTGAAGTACCATTGTTTACGCA
CTACCAAATCGAGTCACAAATTGAATCAGCCTTCCAACGTGAAGTGCGCTTGCCATCAGGCGGTTCAATTGTTATCGACC
CGACAGAAGCCTTAACCTCTATCGATATCAACTCTGCCCGAGCCACGAAAGGCGGTGATATTGAAGAAACTGCATTAAAT
ACTAACCTTGAAGCCGCCGATGAAATTGCCCGTCAATTACGTCTACGTGACTTAGGTGGTTTAGTGGTTATCGACTTTAT
TGATATGACACCAGTTCGTCATCAACGTGAAGTCGAAAATCGTTTACGCGATGCCGTGCACCACGACCGTGCCCGTGTAC
AATTAGGCCGTATTTCACGCTTTGGTTTAATGGAAATGTCACGCCAGCGTTTACGTCCGTCATTGGAAGAGTCCGCAGCC
CATATCTGCCCTCGTTGCCATGGCCAAGGCACAATCCGTAGTACTGAATCTTTAGCGCTGTCTATTCTGCGTTTGATGGA
AGAAGAAGCCATCAAAGAAAACACCTCACAAATCGAAGCCATTGTACCTGTCGATGTGGCTGCATTCCTGCTTAACGAGA
AACGTAAAGCGATTCGTATTACTGAACAGCGCCACGATGTGGAAGTCTATGTGATCCCAGATCCACATATGATGACCCCT
GATTATCGCGTGATCCGTCACCGCACCGATGATGAAATCGACGAATCCAGCTACAAGCGTATTGAGCAGCCAGAAGCCAA
ATTGTATGAACCACGTAAACTGGAACGCACTGCGGCACCTGCACCTGCGCTAAAAGGGTTTACTGCACCACAGAAAGTGG
AACAAGATGTTGCGCCTGTAGCCAAAGTAGAAGCCGCAAAGCCAGGTTTATTTAGTAAACTCTTCAGTGCAATTGGTTCC
TTCTTTAGCTCAAGCGATAACGCTGCAACAGAAAAAAGCGCCGAAACCAAAAAGTCTGACAGCCAGGCCACCAATGCGAA
CCGTCGTAACCGTCGTAATGACACTCGCCGTACTCGCAATAACCAAGACACTGAAAAAGCCAAAGAAGGCTCACGCGAGC
CACGTGCGCGCAATGCCAAGAAAGTGGCCGATGCCCCACAAGCGCAAGAGCGCCCAATCCGTGAAAAGGATGAAAGTGCG
AAGCGCGCTAAGCCTGAGGCTAAGAACCGTAGTCAAGCACCAAAAGAAGTGATTGCAGATGTTCAAGACGAAGCGCCAAA
GCAAGAAGTCGTCCGTGAACGTCGTCAGCGCCGCAATATGCGCCGCAAAGTTCGTATGGACAACACCACTGATGTTGTTG
AAACGTCAATTCAGGAAGAAGCAATATTAGCTGAAATCGTTGCAATCAATGCAGATGCTGCTGTAGAGGCTCAACCGGAA
GCTAAAGCACCGCGTTCACGTCGTCAGCCACGTAAAGAGGTCGCGGTTGCCAATGAGACTACAGACACTCCAGCAACAGA
TGCTGCTGATGAAGCGAAGCCAATTGATGCCATCGCTGATGCTCCTATCGTTGAAAGCCAAGCTGACATACAAGTTGATC
CCAAGTCAGAGGCTCAATTAGCAACCACTGACGAAGACAACACCGACGTGGATGACAAAACCAAACGCGAATCCCGTGAT
GGACAACGTCGTAGTCGTAGAAGCCCTCGTCATCTGAGAGCTGCTGGCCAACGTCGCCGCCGTGATGAAGATGAGCAAAG
CACCGCGGCTCCAGCGCAGTTCATTCCAAATGATGCGTTAGGGGAAGACCAAGACTACCCTGCACCAATGGCAATAGTTG
AAACGGTTAACTTCGCAGATCAAGCTGTGGCTGAAACAGTCGCAGTGGAAGTTGAGGTGAAAAGTGTAGCAACGCAGCCA
ACAACTGTTGCACACACGGCCGATGTCACTACATCCTATGAAGCAACTTTCTCTGAAAGTAAAGCGATAGATGACGCTAC
GTCAGCAGTTGCAGTTGAACAACTCACGGATATTAAAGCGGATGTTGTCGATACTGAAATCGCATCTGAACCTGTAGTCA
ATGATAATGCTACACAAACGGTTAAGGTATCTAACGTTATAGCTGAGTCATCTGTGGTAATAGAACCCACAGTGCAAACC
ACAGTAGTAGCGCAAACGGACGTTAGAACCTTTGATGCAAAAGCTGAAGAAGTGACACAAGCGACTGAAAAAGCTGAACT
GAAAGAAGTGGTAAAATCTGTCGCATCAGCACCGATGGCAAAACCCGCAGCTATCGTCAAACCTCAGGTTAAACCTGTGG
TTGCTCAAGCTTCAGCGGTTCAACCATCGGAAGCTGTTGTGAGCAAACCCAAAGCCGCTAGTCGTTTTGGTGCTATGGTG
TCATCTGAAATGACCAAACCAACAGTAGAAGTCAGAGCACAGGTAGAAGTGCCTAAAGGCCGTGAGTACGAGAATACCCC
TGCCTCTGAAGCAGCGACTAAGCTTAAACACAGTAATAGTGCAGAATCGGATATGGCTCGACCATAA

Upstream 100 bases:

>100_bases
TAGCTCACCAGCCGAGAGGCTTTGTTCACCACAGCTAGGCCCGTAATGCAACGAAACGCGATTGTTTGATGACCTCCATT
TAAAGAAGAATGACGTCATC

Downstream 100 bases:

>100_bases
TTCCTCTCCACAACCTAAAAAGCCATGCACTTGCATGGCTTTTTTATTTTTAGCCAATCCGAGCATATTTAAATTTGGCT
AAATGCTTATTTACTAGTTT

Product: ribonuclease E

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1088_residues
MKRMLINATQSEELRVALVDGQQLYDLDIESPGHEQKKSNIYKGKITRVEPSLEAAFVDYGAERHGFLPLKEIAREYFPK
GYSFQGRPNIKEVVSEGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDERTELKEAMADLEV
PAGMGLIVRTAGVGKESTELKWDLKVLQHHWAAITEAAQTKGAPFLIHQESNVIVRAIRDYLRRDVGEILIDHPRIYEEA
KQHIALVRPDFVERVKLYEAEVPLFTHYQIESQIESAFQREVRLPSGGSIVIDPTEALTSIDINSARATKGGDIEETALN
TNLEAADEIARQLRLRDLGGLVVIDFIDMTPVRHQREVENRLRDAVHHDRARVQLGRISRFGLMEMSRQRLRPSLEESAA
HICPRCHGQGTIRSTESLALSILRLMEEEAIKENTSQIEAIVPVDVAAFLLNEKRKAIRITEQRHDVEVYVIPDPHMMTP
DYRVIRHRTDDEIDESSYKRIEQPEAKLYEPRKLERTAAPAPALKGFTAPQKVEQDVAPVAKVEAAKPGLFSKLFSAIGS
FFSSSDNAATEKSAETKKSDSQATNANRRNRRNDTRRTRNNQDTEKAKEGSREPRARNAKKVADAPQAQERPIREKDESA
KRAKPEAKNRSQAPKEVIADVQDEAPKQEVVRERRQRRNMRRKVRMDNTTDVVETSIQEEAILAEIVAINADAAVEAQPE
AKAPRSRRQPRKEVAVANETTDTPATDAADEAKPIDAIADAPIVESQADIQVDPKSEAQLATTDEDNTDVDDKTKRESRD
GQRRSRRSPRHLRAAGQRRRRDEDEQSTAAPAQFIPNDALGEDQDYPAPMAIVETVNFADQAVAETVAVEVEVKSVATQP
TTVAHTADVTTSYEATFSESKAIDDATSAVAVEQLTDIKADVVDTEIASEPVVNDNATQTVKVSNVIAESSVVIEPTVQT
TVVAQTDVRTFDAKAEEVTQATEKAELKEVVKSVASAPMAKPAAIVKPQVKPVVAQASAVQPSEAVVSKPKAASRFGAMV
SSEMTKPTVEVRAQVEVPKGREYENTPASEAATKLKHSNSAESDMARP

Sequences:
NA

Specific function: NA

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA