Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24374265

GI number:

Start: 2840371

End: 2842137

Strand: Direct

Name: Not Available

Synonym: SO_2724

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374258

Following gene: 24374267

Centisome position: NA

GC content: NA

Gene sequence:

>1767_bases
ATGATCCACTATCACATCATCCCCGTCGATCCTAAGGCGCATTTATTTGCCGTCACCATGACGGTGCAAAAGCCCCTACC
CACCCAAGTATTCAGCCTGCCCGCTTGGCTTCCTGGCAGTTATATGGTGCGGGATTTTGCCAAGAATATTATCGAGCTCA
AAGCCACAGGCAATGATGGAGAGGCGCTTAAACTCACTCAGCTTGATAAACAAACCTGGTCAGTCGACCAGCACTGCGAG
CAAATTACCCTGACCTATCAAGTCTATGCTTGGGACTTATCGGTTCGCACCGCGCATCTGGATATGACCCACGGCTTCTT
TAACGGCAGCAGTGTGTTTTTGGCCGCCCATGGATTTGAAGCAAGCCTACACAGAGTCACAATGCAAGCGCCCACAGAAC
ACGCCTTAAACGAGTGGCGCCTTGCCACCAGCATGACACGTCAAAGCGGTGATGAATTTGCCTTTGGGGACTTTTGTGCC
GAAAGCTATGACGATCTTATCGACCATCCAGTCGAAATGGGTCTGTTCACACACGCCAGTTTTGAAGCCTGCGGCGTCAG
ACACGATATCGTGTTAAACGGTCGCCACCGCGCTCATATGCCTAGACTTTGCCAAGATTTAAAAGCGATTTGCGAATATC
AAATCAAGCTGTTTGGTACGCCTGCGCCCTTTGAGCGTTATCTGTTTATGACCACAGTGCTCGACAATGGCTTTGGCGGT
TTAGAACATCGATCATCGACCGCATTAATGTGTTCGCGCAAGGACTTACCGCTGTCGATGGATGCGCCGTTCAATAACGA
CTATCGCACCTATTTATCGCTCTGCAGCCATGAGTATTTCCATAGCTGGAATGTCAAGCGCATCAAGCCCGAATGCTTCT
TACCCTACCAACTCGAGGCGGAAACCTATACCCCACAGCTATGGGCCTATGAGGGTATCACCTCCTATTACGATGACTTC
CTCACCTACCGCGCAGGATTAGTGGATGAGCAAAGCTACTTGGATATGTTAAGTGAAACCTTTACTAGGGTGTATCGCAG
TCAAGGCCGCTTTAAGCAAAGTATTAAAGATTCAAGCTTTAACGCTTGGACTAAGTTCTACAAGCAGGATGAAAACGCCC
AAAACGCCATTATCAGTTATTACACTAAGGGGGCCCTGTTTGCCCTGTATCTCGACTTAACCCTAAGAAGCGAGACGCTG
GGTAAGCACAATCTCGATGATCTGATGACGATTCTATGGCAGGAATATGCGCTGCAAAATCGTGGCACCACAGACGAATG
TCATCAAAAAATTGTTGAGCGCTTACTGGAGCGTGATTGTCAGGACCTGTTCGCCTATTTAGACAATACCGACGATATCC
CTCTCGCTACGCTGCTCGCCGAGTTTGGTGTGGAGTTTACCTTACGCACGAGCAATGGGGCACAGGATGTGGGCGGTGGC
ACAATCAAAGGTTATGAGATTGCCTTTGGTGCTAAAACACAAGCGACACCAATGGGTCTAAAAATCACCACAGTTGCCCA
AGGCAGTCCGGCGCACCTTGCGGGGTTAAGCGCCGGAGATATCTTAATTGCTGCAGATAATCTACAAGTGACAAGCCAAT
TTGAAGCCCAGCTTCAACAATATCCGCTCGGACAAAGCTTGACCCTACATTGGTTTAGACGAGATGAACTCATGACGGGC
GAACTAACTATTGCCGCAGCACCCAAAGATACCGTTGCGTTAACTATCACCGATAAAACGAAACTGAAGGCTTGGTTAGG
GCGCTAG

Upstream 100 bases:

>100_bases
ATGCGTTGTGTCTCCAGATATTTTGTGTTTCATTTGCCTGTTGTCGGTATTTTTGGCAGCATGACGCCCATTAAAACGCA
TCGGTTTTACAGGATAAATT

Downstream 100 bases:

>100_bases
GCCTTAACGACTCAAAACAAAAAGGCAATTGCACATAGCGATTGCCCTTTTTGCTTGGATTTGGCTTATCGACTTACACA
ACGACATCATGCAAATAAGT

Product: protease, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>588_residues
MIHYHIIPVDPKAHLFAVTMTVQKPLPTQVFSLPAWLPGSYMVRDFAKNIIELKATGNDGEALKLTQLDKQTWSVDQHCE
QITLTYQVYAWDLSVRTAHLDMTHGFFNGSSVFLAAHGFEASLHRVTMQAPTEHALNEWRLATSMTRQSGDEFAFGDFCA
ESYDDLIDHPVEMGLFTHASFEACGVRHDIVLNGRHRAHMPRLCQDLKAICEYQIKLFGTPAPFERYLFMTTVLDNGFGG
LEHRSSTALMCSRKDLPLSMDAPFNNDYRTYLSLCSHEYFHSWNVKRIKPECFLPYQLEAETYTPQLWAYEGITSYYDDF
LTYRAGLVDEQSYLDMLSETFTRVYRSQGRFKQSIKDSSFNAWTKFYKQDENAQNAIISYYTKGALFALYLDLTLRSETL
GKHNLDDLMTILWQEYALQNRGTTDECHQKIVERLLERDCQDLFAYLDNTDDIPLATLLAEFGVEFTLRTSNGAQDVGGG
TIKGYEIAFGAKTQATPMGLKITTVAQGSPAHLAGLSAGDILIAADNLQVTSQFEAQLQQYPLGQSLTLHWFRRDELMTG
ELTIAAAPKDTVALTITDKTKLKAWLGR

Sequences:
NA

Specific function: NA

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA