Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is rnd

Identifier: 24374123

GI number:

Start: 2706706

End: 2707809

Strand: Reverse

Name: rnd

Synonym: SO_2580

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374124

Following gene: 24374118

Centisome position: NA

GC content: NA

Gene sequence:

>1104_bases
GTGTTTCAGTATGTGAGTGACGAAGCGAGCCTCAATGCCCTCGTCGCTCAATATCAACAAAGTCCGCTACTTGTGTTAGA
TACCGAGTTTGTGCGCACTCGTACTTATTACGCTAAGCTTGGCCTCATTCAAGCTTATGATGGTAAAACCTTAGCCTTGA
TTGACCCTATTGCTTTGCCCGATCTCAGTGCATTTTGGGCTTTGCTGGATAATCCGAATATTATCAAACTGGTGCATTCC
TGTAGTGAGGATTTAGAAGTGTTTGCCCACTATGGCCAGCGCCAACCTACTCCCTTATTTGATAGCCAAATCGCCGCTTC
GCTATGTGGTATGGGTCATGGCTTAGGTTATGCCAAGTTAGTTGAAACTTGCTTAGGTGAAGTGATTGATAAGGGCGAGT
CGCGTACCGACTGGATGCGCCGCCCTTTGACCGATGCCCAGCTCAGTTATGCGGCAAATGATGTGTTATACCTGTACCAA
CTTTATCCGCAATTAGCTGAAAAGCTTCAAACTCAGGACCGCTTAGACTGGCTCTATGAAGAAGGCGAGCGGATGACCGA
AGGGCGTTTAGCCTCGCCTGATGCCGAAACTGCATACCTTAAGGTGAAAAATGCCTTTCAGCTCACCGAGCATCAATTGG
CTTACCTTAAAGTGTTAGCCAAATGGCGCTTAGAAAAAGCCTTAGCGCGGGATTTAGCCTTAGGCTTTGTGATTAAAGAT
CATGGTTTGATTGCGCTAGCGAAAAAACAACCTAAGAGCATGAGTGATTTGCTCAAACTGAACGATTTGACCGAGCAGGA
AAAGCGCATCCACGGTAAAGATATTTTACGGGTAATGCAGACTGCCGACTTAAGTAATCCACCAGAGTTAGTTGATGTAT
TGGCGCTTAAACCCGGTTATAAATCAGCCTTTAAGACCATTAAAACCAGTTTAACAGAACTCTGTGAGCAACATGCCATT
CTGATGGAAATGTTAGGTTCAAAGCGTCATATTCATGAGTATTTACAATGGCGTTGGGATAAACAGCAAGGGGAATTGCC
GACAGTATTAAGCGGTTGGCGCGGGGAGATTGCGGCCGAGTCATTGGCAAAACTTGAGGTCTAA

Upstream 100 bases:

>100_bases
AGAGACGAAGTTAAGCGTGCGTAAGATTGAAGCCGGCAATAAGCCGGCTTTTGTTTTTATGGATTGTAATTACTCACAGG
AACTGGAGAAGAATTTGTCA

Downstream 100 bases:

>100_bases
TCTTGAGGGTAATGCTGGCAGAAGGCGATGTTTAAGAGCTTATTTTTAATGAAGTTTAAAAGCAGAGTTGAAAGCTTACA
TTTAACATCTTAAGGAAAGT

Product: ribonuclease D

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>367_residues
MFQYVSDEASLNALVAQYQQSPLLVLDTEFVRTRTYYAKLGLIQAYDGKTLALIDPIALPDLSAFWALLDNPNIIKLVHS
CSEDLEVFAHYGQRQPTPLFDSQIAASLCGMGHGLGYAKLVETCLGEVIDKGESRTDWMRRPLTDAQLSYAANDVLYLYQ
LYPQLAEKLQTQDRLDWLYEEGERMTEGRLASPDAETAYLKVKNAFQLTEHQLAYLKVLAKWRLEKALARDLALGFVIKD
HGLIALAKKQPKSMSDLLKLNDLTEQEKRIHGKDILRVMQTADLSNPPELVDVLALKPGYKSAFKTIKTSLTELCEQHAI
LMEMLGSKRHIHEYLQWRWDKQQGELPTVLSGWRGEIAAESLAKLEV

Sequences:
NA

Specific function: NA

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA