Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is cga

Identifier: 24374006

GI number:

Start: 2575975

End: 2578518

Strand: Direct

Name: cga

Synonym: SO_2459

Alternate gene names: NA

Gene position: NA

Preceding gene: 24374005

Following gene: 24374007

Centisome position: NA

GC content: NA

Gene sequence:

>2544_bases
ATGAACATGCCATTTACCGAGCAGCCTAAACAAGACTGTGGCCAACTCAAGCAACACAGTAGCAGTTTAACCTTAAAGCC
CATTGCCTTAGCGATCACAGCCAGCCTTATCGGATTGGCCAGTTTGAGCGCCTGTTCACCGATAGCGGATAAATCGGCTT
CATCAACCACCTCCAATGCCGTATCAAATAACGAGATAAACACGGCAAGCTATAACATTGCCCCCGGTGCTCCCGGCAAA
GCGCCAACTTGGGCATTCTCCGGCAAAACCGGTATTGGCACATCCTATGAGCCTTATACCCAAGGGCAATATCAAGATAG
CCAGCAAAACCCCATTAGCCGGGTGTGGTTCTCGATTGCGCAGGGGATTTTAACCGAGACCATGTTCGGCCTTATCCACA
ATGCTCAGCTCAAAGAATTGCAATTTGTGATCACCGGCAATGGCTTTGTCGATACCGAAAAAGACAATACCATCAGCAGT
ATTGAATATTTAGATACCGATGCCAATGGCCGACCGCAATCCTTGGCCTATAAGATAATCAATCGTGATGTTGAAGGTAA
GTATCAGATAGAAAAACATATTTTCACCGATCCAGGCCGCGATACGTTGGTGATGCGCGTCACTTTTACCGCCTTTGAAG
CAGGTATCACGCCGCATTTATACGTTAATCCTCATATTGATAATGCGGGAGCCAATGATATAGGCCGAATCGATCATCAA
GCGCTTATCGCCTACACCGCCGCCCCGCACAGCAGCGTGATGACGGTCAAATCCGATATCAACTTTGTGCGCGCAACTAC
AGGCTTTGAGGGTATCTCAGATGGGCTTGCCGATTTAGCCGACAACGGCACACTGGATACCCTGTATAGCGCCACAAGTG
CGCCCGATAATCGTACTCAAGGCAATATCGCCTTTACCGCGAGTTATCCAGAAGTAACACCAAATCAACCGCTTAACATC
AATTTAGCGATTGGATTTGGCCACGATGAGTTAAGCAGCTTAACCAATGCCAAGGCTACGTTAAATGCAGGTTACGATGC
TGTGTTAGGTCAATACAACGCTGGATGGCGCAGTTATTTACAGTCACTGCCCGCAATCGCAGGGATGGCAAAAAGCACCA
CAGATAATGGCAAACTGCTCTACACCAGCGCCATGGTACTCAAAGCGCAGGAAGATAAAACCTATGCAGGCGCACTTATC
GCATCACTATCCAACCCTTGGGGTGATACCGTCTCGGCCATCACCCCCAGTACAGGTTACAAGGCCGTTTGGCCGCGCGA
CTTTTATCAATGCGCGATGGCATTTTTGGCCATGGGTGATACCCAAACCCCCAAAGTCGCCTTCGAATACCTTAAAAAAG
TGCAAGTGAGTGATAAAACCTCAGGCTTTAGCGGCACGCCCGGCTGGTTTTTACAAAAGACCCATGTGGATGGCCAAATT
GAATGGGTGGGCGTACAGCTTGACCAAACGGCCATGCCCATTATGCTCGGCTGGAAACTCTGGCAAGCGGGTGGGCTAAG
TCAAACTGAACTGAGCTATTGGTATCAAGAGATGTTAAAAGGCGCGGCGGACTTTTTAGTCAGCGGCGGCGAGGTTAATC
TTGACTGGAACCACACGCCAGTCACACCGCCAAAAACCCAGCAAGAACGCTGGGAAGAACAAGCGGGCTTCTCACCCTCC
ACCACGGCCGCGGTGATCGCAGGTTTAGTGACAGCAAGTGATATTGCCAAAGCGGTGAATGATCTCAATGCCAGCCAGCG
CTATTTAGATTCTGCCAAAACGCTTAATCAACAGCTTGAAAAACACTTAGTGACGACCCAAGGGTTGCTCACGGATAGCC
AAGGCGTGAGTACTCCTTATTATCTGCGATTAAGCCCCCATGGTGAGCCAAACACTGCGACTAAACTGGCTGCAAATAAC
GGTAAAGCGGGATTAGATCAACGCCAGATCCTCGATGCAGGCTTTTTAGAACTGGTGCGCTATGGCGTGCGTGGCGCAAC
CGACAAGCTCATCAATCAAAGTCTGGCACTTGTAGATAACACTAAGCTAGAAGACAATCTACGCCTCAAATATAGCTTTA
CCGCAAAAGACGGCAGCAGTGTTCCGGGCTTTAGGCGTTATGGTAACGATGGCTATGGCGAAGACACTGTCACTGGCGCG
AACTACGCTGAATCGGGTGGTAATAGCGACAATCAACGCGGCCGAGTATGGCCCTTCTTCACCGGCGAGCGGGGACATTT
TGAACTGGCTTTAGCAAGTGCAAAGGGGGAATTGACTGGCACGAAAGGACAGCAAACCAAGCAACAACTTATCAATACCT
ATGTACAAGGTATGGAAACCTTTGCTAATGCCGGCATGATGCTCCCCGAGCAGGCATGGGATGGTGTTGGTAACGCCACA
CGTTATCAATATCGACTCGGTCAAGGCACTAACTCTGCCACTCCGCTTGCTTGGACTCACGCTGAATATATCAAGTTAGT
GCGCTCAATGAATGATGGCCAACTGTGGGATCATTACCCTATTGTCCCGGAGACGTTGAAATAA

Upstream 100 bases:

>100_bases
CGTTTGCGTATATCAAGCGCCATGGTTCAGCCACTTAGCTTTTAAATACCAAAATTTCAAAAAGATTAATTATAACAACA
TCATGACTGGGGAGATTTTG

Downstream 100 bases:

>100_bases
TTAACTCAATATAGAATTCAGCCATAGCAGCGAAAACAACTAATATTGTTCTCGCTACTGTGGCTGAGTCGTTTCTCTCA
TTTTTAACGAATGACATATC

Product: glucoamylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>847_residues
MNMPFTEQPKQDCGQLKQHSSSLTLKPIALAITASLIGLASLSACSPIADKSASSTTSNAVSNNEINTASYNIAPGAPGK
APTWAFSGKTGIGTSYEPYTQGQYQDSQQNPISRVWFSIAQGILTETMFGLIHNAQLKELQFVITGNGFVDTEKDNTISS
IEYLDTDANGRPQSLAYKIINRDVEGKYQIEKHIFTDPGRDTLVMRVTFTAFEAGITPHLYVNPHIDNAGANDIGRIDHQ
ALIAYTAAPHSSVMTVKSDINFVRATTGFEGISDGLADLADNGTLDTLYSATSAPDNRTQGNIAFTASYPEVTPNQPLNI
NLAIGFGHDELSSLTNAKATLNAGYDAVLGQYNAGWRSYLQSLPAIAGMAKSTTDNGKLLYTSAMVLKAQEDKTYAGALI
ASLSNPWGDTVSAITPSTGYKAVWPRDFYQCAMAFLAMGDTQTPKVAFEYLKKVQVSDKTSGFSGTPGWFLQKTHVDGQI
EWVGVQLDQTAMPIMLGWKLWQAGGLSQTELSYWYQEMLKGAADFLVSGGEVNLDWNHTPVTPPKTQQERWEEQAGFSPS
TTAAVIAGLVTASDIAKAVNDLNASQRYLDSAKTLNQQLEKHLVTTQGLLTDSQGVSTPYYLRLSPHGEPNTATKLAANN
GKAGLDQRQILDAGFLELVRYGVRGATDKLINQSLALVDNTKLEDNLRLKYSFTAKDGSSVPGFRRYGNDGYGEDTVTGA
NYAESGGNSDNQRGRVWPFFTGERGHFELALASAKGELTGTKGQQTKQQLINTYVQGMETFANAGMMLPEQAWDGVGNAT
RYQYRLGQGTNSATPLAWTHAEYIKLVRSMNDGQLWDHYPIVPETLK

Sequences:
NA

Specific function: NA

COG id: COG3387

COG function: function code G; Glucoamylase and related glycosyl hydrolases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA