Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is dacB

Identifier: 24373941

GI number:

Start: 2497388

End: 2498911

Strand: Direct

Name: dacB

Synonym: SO_2394

Alternate gene names: NA

Gene position: NA

Preceding gene: 24373940

Following gene: 24373953

Centisome position: NA

GC content: NA

Gene sequence:

>1524_bases
ATGGAAACGTTTTCCCGATTATTCACCTTACCTCGTTCAACGGGCTTACTGCTAACGGTAGTTGCAACTGCCCTATTCCC
AAGTAATGTGTGGGCAGCTGCCGCAGATATTAAGCATACTACGCTTGACCAACAAATGAGTGATATAGCGCCGTCTCATT
CGCAAATTGCGTTACTTGCCCATGATATGTCGAACGACAAGCAGCTTTACAGCCAGCAAGCCGATACCTTGTTTATCCCT
GCCAGCACCCAAAAAGTGCTTACCGCTGTCACGGCCTTAGCTGCACTTGGACCAGAATTTAGCTATGTGACAGATCTTTG
GAGTGATGCCCCAATCCGCCAGGGACATGTTGAAGGGAGTGTATATTTACGCTTTAGCGGCGATCCCACATTAACCCACG
AGGATTTGAAGGCTTTATTCGCTCAGCTACAAAAACTGGGCATAAAGCGAATTGAGGGGCACTTATATCTTGTTGGAGAT
AAACAAGAACAATTACAAGCGCCTGGCTGGGTTTGGGACGATCTCGGCATTTGTTTTGCGGCACCAGTGTCGAGCTACAT
CATCAATCAAAACTGTGTATATGGGCAGTTTGTGCCAAGCTCTGCAAAACAAACGTCTCGGGTAACATTAAGCGCGAACA
GTTATGGTGTTAACGTCAGCAGTGATGCAATTTTTTCCCCTCAAGCGAATCATGATTTTTGCCAACTTGATTTAGTCCGC
TTAAGCCAAAATCAATATCATCTGCGGGGCTGTTATCCCGGCAGTGAAGCCATACCGCTCGCGATCGCGATTAGCGATCC
GCAAAAATTTGCCATCGACACCTTAACGGCCACGCTAAAAGGAAAAATTTCCCTCTCGGGCAAAGTTAAAATTGGCCATG
ATATCCCTGATAAGGCAAAACTTATTGCCAGCCATCGCAGTGCGCCATTGCCCGAGCTATTAAAGACGATGTTACTTAAG
TCGGACAACCTGATCGCTGACAGTTTGTTTAAACGTGTAGGGCAAGACTATTATAAAACTCAGGGGAGTTTTACTTATGG
CGCGGCGGCCATGCGACATATTCTGACTGAGTTAGGGATTGACTTAACCAATGCCAATATCGTCGATGGTTCTGGGCTTT
CTCGCTATAACTTGTTGAGTGCTAAGCAATTAGCTGATGTGCTTACACTCATGTATCAAGATGCTCGCTTTCACAGCTTG
ATTGATAGTTTGCCCGAGGCAGGAGTCAGCGGTACGCTAAAATATCGACAGGGTTACACTCAACCACCACTCAAAAACCG
TGTTTTTGCCAAAACAGGTTCAATGCAAGGGGTTGCCAATTTAGCTGGTTTTATTCGAATACCACAACAGCGGGATATCT
TATTTGTGGTACTTGAGAATGGCATAAGCCCTGAAACGAAAAAACAACGCAAACCTGCGTTTAGCGCGGACTTTTTAACT
CGACTAATGGCCACAGTTGAACAGCAAGCACACACTAGCCAAACATCTGTCAAAGAACTTAACACGGTTAAAAAAATTAA
CTGA

Upstream 100 bases:

>100_bases
ATCGGGTTAGTTTTATTTGTCACCCTAAGGCTGTATCGCCTTATGGAAAAAGATGACGGCAGTCATGATCGCTAACAAAG
AGAGTTAATAAACAACAGAC

Downstream 100 bases:

>100_bases
TTAAACTAAAAAGCACTGATAAGTCAGTGCTTTTTCTCTTTTACTGCAGTCTATTCAAACTTAGAATAATTCAGCTGGCA
TCGCCATAGTGCTGACATCA

Product: penicillin-binding protein 4

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>507_residues
METFSRLFTLPRSTGLLLTVVATALFPSNVWAAAADIKHTTLDQQMSDIAPSHSQIALLAHDMSNDKQLYSQQADTLFIP
ASTQKVLTAVTALAALGPEFSYVTDLWSDAPIRQGHVEGSVYLRFSGDPTLTHEDLKALFAQLQKLGIKRIEGHLYLVGD
KQEQLQAPGWVWDDLGICFAAPVSSYIINQNCVYGQFVPSSAKQTSRVTLSANSYGVNVSSDAIFSPQANHDFCQLDLVR
LSQNQYHLRGCYPGSEAIPLAIAISDPQKFAIDTLTATLKGKISLSGKVKIGHDIPDKAKLIASHRSAPLPELLKTMLLK
SDNLIADSLFKRVGQDYYKTQGSFTYGAAAMRHILTELGIDLTNANIVDGSGLSRYNLLSAKQLADVLTLMYQDARFHSL
IDSLPEAGVSGTLKYRQGYTQPPLKNRVFAKTGSMQGVANLAGFIRIPQQRDILFVVLENGISPETKKQRKPAFSADFLT
RLMATVEQQAHTSQTSVKELNTVKKIN

Sequences:
NA

Specific function: NA

COG id: COG2027

COG function: function code M; D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA