Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24373770

GI number:

Start: 2329348

End: 2331606

Strand: Direct

Name: Not Available

Synonym: SO_2216

Alternate gene names: NA

Gene position: NA

Preceding gene: 24373769

Following gene: 24373773

Centisome position: NA

GC content: NA

Gene sequence:

>2259_bases
ATGGACGAAGGAATGCAGATTGTGGGTGCTGTTAGTGGTTTAAGCACTCCGTTTAATCAAAACGTTAGCCTCGAATGCTA
TAACGGTATTCTTTCGATGCTGCTAAATGGCGCTCCGTTAGCAGATATTCTCCATGCTTTAGTGTTAAAAATTGAAGATC
AACGCCTTGGCACCCATGCTTCTGTCTTGCTGCTCAGTGAGGATGGTAAAAGAGTGCTAACGGGAGCCGCTCCCCATTTA
CCCGATAGTTACAATCAAGTTATCCATGGGGTCGAAATTGGTCCTGAGGTCGGTTCTTGTGGTACCGCGGCCTATACGGG
ACAGCGGGTGATTGTTGAGGATATTGAACATCATCCTTATTGGGCCTTGTATAAATCTTTTGCGCTTGTCCACGGATTGA
GGGCATGTTGGTCTGAACCTATCAAAGATACTCAAGGCAAGGTACTTGGCACCTTTGCTATGTATTACAAAGAGATTAAA
TCCCCAACAGTTGCGGATTTAACCTTAATTGCTGAGGCGGCAAGACTGGCGAGTTTAGCCATAGAACGTAGCCGTTCATT
GGAGTTTCAGCGTCTTGCGGTGAAAATATTTGATCGCTTACCGCTTGCGCTGGTGATTACCAATGCCAGCCATTCTGTAC
TCTATGCCAATGATGCGTTTAAGCTGATGGTTTGCCTACAACCTGATGATATTTTGGCATTTAATCCTGAGCAGTTTTTT
TCGCCCTCAGAGCCACATGAAATTGCCTCCTTATTTAATCACCTCTCAGAGGGGAAAATGTGGCAAGGTGAATTGGTTGG
CCTGCGTAATAATGGCGAGACTTTTTATCTTGATTTAACCGTAACGGTTTTCCGTGAATCCCACAGCGCAGATCTCGGTT
TTGCTTGGTTATTTTCCGATGTCAGTGAGCGTAAAAAAGCGGCGCAGTTAATCAAATATCAAGCGAATAATGATTCCTTA
ACGGGGCTTGCTAACCGCAACGCCCTGTTTAGGCAAATCCAAGAGCTTATAAATGCCGATAGCTTAACGCCGGGTTTTAG
CTTTATGTTGATGGACTTGGATAACTTTAAACAGGTTAACGATACCTACGGCCACGATAAAGGCGATGTCCTCTTAGTGC
AGATGGTGGAACAGGTTAAAATTTGTTTGGACCCGCAGGCGGTGTTTGCGCGCTTAGGTGGTGATGAGTTTGCCATCTTA
TTGCCAGGGGTTGTGACTCAAAGAGAACTGTCGCAGCTGGCGGATAAGATCAATAAACAGGTTTATCGACGTTACGAATT
ATCCCACGATAAAGGCGTTTATAGTTCAGTGAGTATTGGTATTGCACGTTTCCCTGAAGATGCCCTCGATTTAGAGCAAC
TGTTAAACTGCGCCGACCAAGCGATGTATATCTCTAAGGCCAATGGTCGTAATCGGTATCATTTTTTTACCGAGCAAATG
CAACAAAATGCCGAACGTATTGCCAATCTTCACACGCTACTTAAGCAAGCCTTAGAACAAAACGCCTTCGAACTGTATTT
TCAACCGATAGTCGATGCCACAACGGGGCTTATTGTCCGCGCCGAAGTGCTATTACGCTGGCAGCATGAAGGGCAGTTTA
TTTCCCCCGATGAATTTATCCCCATTGCCGAAAACAGTGGCTTAATCGTTAGCATTGGTCGCTGTGTACGACAAGCCGTA
ATGCAAACCATTGTTGAAATGCAAGCGCTGGGTTGGCCGATGAGTTTAGCAATTAACGTGTCGACCTTTGAATTTTGGTC
CCATGAGTTGCAGGATGAGTTTTGTGACTCCTTTACCGATATTATTGAAGGCTTAGGGGTAGAGGATTTTCCCTATGAAT
TGATCACCTTGGAGATCACTGAATCCCTGTTAATGAAAAAACATGCTCATTTAATTCAAGTGCTTAATGAGTTACGTGCC
AGAGGTATTAAAATCTCCCTTGATGATTTTGGTACAGGTTATTCTTCGCTGTCTTACTTAGCGAATTTTCCCATCGATCA
AATTAAGATCGACAAGAGTTTTATCGATAGGCTCGCGGAAGGTGAGCGGCATCTTGCCTTGATTGAAGCGATAGTGCGCT
TAAGTCATGCACTTAACTTACGCGTGACGGCGGAAGGCGTTGAAACTCAAGAGCAACTTCAGGTGATGATGGATAACCAT
ATTCAAGAAATTCAAGGCTATCTATTTTATAAACCCATACCCAAGGCGGTGTTTTTTGAATTACTGGCTAAACAAGCGGT
AATTTCGCCACATTCATAA

Upstream 100 bases:

>100_bases
TGCTTTAACGTCTCTAAGTCCCTAAAATTCACCTTTGATTTACAAAGGTTAATCACCTTAGTAATGTCGTTAACCTAAAC
GCTAACTGACTAAGGGTTCT

Downstream 100 bases:

>100_bases
TCGATTCAACCATCTCATTTATAACACTAAGCGCGCCATTGGCGCACTTAGTGTTTGTCCCCTCAACGCGAGTGAAGAGA
TTACTTTGCCGCTAACTGGC

Product: sensory box protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>752_residues
MDEGMQIVGAVSGLSTPFNQNVSLECYNGILSMLLNGAPLADILHALVLKIEDQRLGTHASVLLLSEDGKRVLTGAAPHL
PDSYNQVIHGVEIGPEVGSCGTAAYTGQRVIVEDIEHHPYWALYKSFALVHGLRACWSEPIKDTQGKVLGTFAMYYKEIK
SPTVADLTLIAEAARLASLAIERSRSLEFQRLAVKIFDRLPLALVITNASHSVLYANDAFKLMVCLQPDDILAFNPEQFF
SPSEPHEIASLFNHLSEGKMWQGELVGLRNNGETFYLDLTVTVFRESHSADLGFAWLFSDVSERKKAAQLIKYQANNDSL
TGLANRNALFRQIQELINADSLTPGFSFMLMDLDNFKQVNDTYGHDKGDVLLVQMVEQVKICLDPQAVFARLGGDEFAIL
LPGVVTQRELSQLADKINKQVYRRYELSHDKGVYSSVSIGIARFPEDALDLEQLLNCADQAMYISKANGRNRYHFFTEQM
QQNAERIANLHTLLKQALEQNAFELYFQPIVDATTGLIVRAEVLLRWQHEGQFISPDEFIPIAENSGLIVSIGRCVRQAV
MQTIVEMQALGWPMSLAINVSTFEFWSHELQDEFCDSFTDIIEGLGVEDFPYELITLEITESLLMKKHAHLIQVLNELRA
RGIKISLDDFGTGYSSLSYLANFPIDQIKIDKSFIDRLAEGERHLALIEAIVRLSHALNLRVTAEGVETQEQLQVMMDNH
IQEIQGYLFYKPIPKAVFFELLAKQAVISPHS

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA