Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is recB

Identifier: 24373706

GI number:

Start: 2255679

End: 2259458

Strand: Reverse

Name: recB

Synonym: SO_2148

Alternate gene names: NA

Gene position: NA

Preceding gene: 24373707

Following gene: 24373705

Centisome position: NA

GC content: NA

Gene sequence:

>3780_bases
ATGATACTTCCTACTACATCACAGGCGCTGCCGTTAGATCCGCTCACCCTGCCATTTGGTGGTAGCCGATTGATAGAGGC
CAGTGCGGGCACAGGTAAAACCTATACGATTTCGGGCTTGTATCTGCGACTACTGCTTGGGGATGGCTTAAGCGAACCAC
TGAGTTGCGAACAAATTCTGGTAGTAACCTTCACCAATGCCGCCACAGAGGAATTAAGGGACAGGATCCGCCGCCGTATA
CAAGTGGCTTTTAAGTGTTTCTTGGGGCTCGAAATTAACGATCCCTTTGTACAGGCGTTGTACGATAAAACCCCAGAATC
TGAGCGCGCCATCGCCCTAAGACGCTTCGACTTGGCGCTCAAATCCCTCGACGAAGCGGCCATTTTTACTATTCACGGTT
TTTGCCAACGGATCTTAGCCGATCTCGCCTTCGAATCCTCTTTACTGTTCGAGTCAGATTTTACCTTAGACGACAGCGAG
TTTTTGCACCATGCAGTGCGCGACTTTTGGCGTGAAGCCTGCTATCCGCTGCCGGAATATTTAGCCCAGATTATTGCCAG
CGAATTTGGCGATCCCGATGGCTTAGTCAAGCAGCTTCGGGCCTTGCTCGGTGCTAGTGAAGCAAAACCGCTTAAACCCG
TGCAGCCCTTTGCTCGTTTGGCAGAATCCTTAAGCCAGAGTGTGCAGCGCTTTAAACTCGCCTGGCCGCGTGGCCGCGAC
GCGCTGTTAGCGTTACTTCATAGCCTGCCGCTTAATGGCCAGCGCTTTGGTAAAGCGAGCGACAATTACCCCAAACTGGC
GGAAATGTTCGACCAACTGGACAACTTTATCGCCTTTGGTCATGGCTTACCGCCGCTAAAAGTGCTTGAGGCCTTGTCAC
TCTCAGAACTTAAGCTCAATAAAGGCGGTGTACTCCCAAGCGTGAGCGAGGCGCCACTGCTTGACCATATGGAGCAATTA
GCCACGCTGATTAACGCCATTAAACCCGCGTTTTTATTCAGTGCTAAGCAAGGGATCAGCGAGCGGTTTGCTAAGCAAAA
ACAGCTTAAAAATGTGCTAACACCGGATGATTTGCTTACCACCTTAGCTGCTGCGATGCTGGCCAATCCTGATACTTTGC
CTAAAGCGGTGGCAAGTCGCTTCCCTGTGGCCTTAATCGATGAATTCCAAGATACCGATCCTTTGCAATTTGCGATTTTC
TCGTGGATTTATCAAACCCGTTTGGGGGTTAAAGCGCAAAATTCGACAGCTGTCGAACCCAAGGCTCGCACGGATAGCAA
ATTAAGCCTGCTGATGATTGGTGACCCCAAACAGGCGATTTATGCTTTCCGCGGCGCCGATATTTACACTTATATTGAGG
CGCGCAGGCAAACCCAAGCGCACTATTTTCTCGACACTAACTATCGCTCGAGTCGTAATCTGGTGGCAGGAGTCAATCAT
CTATTTGCCCAGCATCCCAATCCTTTTATTAGCCAATCGATTCCCTTTGACAGGGTAAAAACACCCGCCAGTGCGGCGGC
AAAACAGTTAGTCGAAAGTACAGCCAATAGTGCCGCTCTGCGGTTAAAACTGTTACGCGAGGGCGAAACGGGGCTGAATA
AAGCCAGCGCCAGACAAACATTGGCCGAAGATACCGCCGCCGAGATTACCCGTTTACTCACGGAGGCCGCCAATGGCCAA
TGCCATACGCCAAAAGGGCCATTAATTGCTAAAGATATCGCCATTTTAGTGCGCGATAGAAACGAAGCGGCCGTGATGAA
AACCGCGCTGAGCAAGCGCCAAATTGGCGCGGTCTTTTTAAGCCGCGACAGCGTATTTGATACCGTTGAAGCGCGGGAAA
TGGCGCTCATTTTGCGCGCATTGGCCAGTCCCAAGGATGAGCGCGCCCTGCGCAGCGCTCTCGCCACCGCGCTACTTGGC
TATAGCGCAGAGCAAATTCATGCCTTTAACCAAGATGAAGAGCAGCGCCAAATGCTGCTCGAACAGTTTTTTGCGCTACA
TCAGATCTGGCAAAAACGCGGCATTATGCCAGCGCTGCTGAGCTTAGCCAACGCCACCCACATGGTGGCACGCCTACTGC
AAACACCCAGCGTTACAGCCACTGCCGACCAAGATAGCGAAGAGCCCGATGAGGCGAGTAATGGCGAGAGGCGACTAACA
GATTTTCGCCACTTAGCCGAGCTGTTGCAGCAAAAGGCCACTGAGATTGATGGCATCAGTGCCCTACTCAATTGGTATGA
GCAACAACTTATTGATAATACAGGGACAGATGAGCAGCAGCTGCGCCTTGAGAGTGAGCAAAATCTGGTGCAAATCGTGA
CTATTCATAAAAGTAAAGGGCTGGAATACCCAGTGTGTTTTATCCCCTTTGTTAGCCTTGCACGGGATAATCGCCGCCGC
CCGACACCCATGCTCTATCACAGAACTGATGCGGATGGAGCGCAGGAGCTGGTATGGGATATTGAAGGCACAGACGAAGG
CTGGGAGCAGGCAAAGCAAGAAACCTTAGCCGAAGATCTTCGCCTACTTTATGTGGCACTCACCCGCCCTGTGTACCTGT
GTTATTTGTACATCGCTAACCATAGCCGCATGTTAAAAGCCGGGATCAAAAGCCAACTGCATGAAACCGCTATCGGTTAT
CTTTTAGGAGTAACCGATGCCGGCTGTGATTTTGCACGTCTGCACAGTGCAGCGCAGGCGCTGCTTAATGGTGTAGAGTC
GAATGCGCAAGCGATCAGCGTGGAATGCGTTGCTGACAACATTGCTGATAACAAGCTGCACACGGGTGAAACGCAATCCC
ACACCTTAAATGCCCGTAATGTCACCCGTCAGTATCGCACCCCATGGCGAGTAGGCAGTTATTCTGGCTTAGTCAAAAAT
GCGCCCCACGCCAAAGCCAGCCCGGGCGCCGATGATGAAGTTAGCGCGGTATTTGGCGCAGAACCCGCCAATAGCCTAAG
TGAATCCTCATGGCAAGATAGCGCTGATGTACCGCAGCTACCACTACTCAATCGCTTTAGTTTTGAGCGCGGCGCCAATG
CGGGGAGTTTTATGCACTTAGTGCTTGAGTTAATTGATTTTACTCAGGCCAAAATCGATTTACCGCGTGAGTTACCTAAA
GCCATGCTGCAATATGGCATCGCCCCCGAGTGGCAAACTGTATTGCAAGACTGGTATATGGAAATATTGCAGGCACCGCT
GGCATTAATGGCGCAGGATAATCAGCTCATCAATCCCGAGCTATGTCTAGCAGCGCTCGTGCCACAACACACCTTAGTGG
AGATGGAGTTTTACCTGCCTTTAAATCGATTAAAAGATGCTGAGCTTAATCAACTCCTCGGGCAATTTGGTTACGATACT
GCGCTACATTTCGATGAATTACAGGGTATGCTCAAGGGCTTTATCGACTTAACCTTTGAATATCAAGGTAAGTTTTATAT
CGCCGACTACAAATCAAACCATTTAGGCGACACGATTCAGGCTTACCATTATGGAGCGCTTAAGCAGGCGATTAGCGATC
ATAGGTACGATTTGCAATACATTCTCTACTCCCTCGCCCTGCATCGTTATTTGGCGATGCGACTGCCAAACTATGACTAC
GATATCCATATCGGCGGCTGTTATTACTTATTTTTACGGGGAATGTCGGTTCAGTATCCCGGCTTTGGGGTTTACTACGA
TAAGCCACCTAAGGCGCTCATTCTCGCCTTAGATGCGCTATTTAACCGCAGTCAAGATGAAAGCCATATGAGTCAACAAA
ATACGGGAGCGATGGCATGA

Upstream 100 bases:

>100_bases
ATAAAGACACCCTCGCCCAACTTGAGGAGTTTGTGCTCAATGCTGAACCACAAACCGCAACATCAGAGGGAGCGCAGCAA
TGAGTGCACCATCAAACAAT

Downstream 100 bases:

>100_bases
ACCACAGCACCGATACGAACAGCGCCGACATGAATAACGCCACTGCCCTTGCCGCCAATTGGTACAATGCAGGCGCGCTG
AGACTTAAAGCACCACTGAC

Product: exodeoxyribonuclease V, beta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1259_residues
MILPTTSQALPLDPLTLPFGGSRLIEASAGTGKTYTISGLYLRLLLGDGLSEPLSCEQILVVTFTNAATEELRDRIRRRI
QVAFKCFLGLEINDPFVQALYDKTPESERAIALRRFDLALKSLDEAAIFTIHGFCQRILADLAFESSLLFESDFTLDDSE
FLHHAVRDFWREACYPLPEYLAQIIASEFGDPDGLVKQLRALLGASEAKPLKPVQPFARLAESLSQSVQRFKLAWPRGRD
ALLALLHSLPLNGQRFGKASDNYPKLAEMFDQLDNFIAFGHGLPPLKVLEALSLSELKLNKGGVLPSVSEAPLLDHMEQL
ATLINAIKPAFLFSAKQGISERFAKQKQLKNVLTPDDLLTTLAAAMLANPDTLPKAVASRFPVALIDEFQDTDPLQFAIF
SWIYQTRLGVKAQNSTAVEPKARTDSKLSLLMIGDPKQAIYAFRGADIYTYIEARRQTQAHYFLDTNYRSSRNLVAGVNH
LFAQHPNPFISQSIPFDRVKTPASAAAKQLVESTANSAALRLKLLREGETGLNKASARQTLAEDTAAEITRLLTEAANGQ
CHTPKGPLIAKDIAILVRDRNEAAVMKTALSKRQIGAVFLSRDSVFDTVEAREMALILRALASPKDERALRSALATALLG
YSAEQIHAFNQDEEQRQMLLEQFFALHQIWQKRGIMPALLSLANATHMVARLLQTPSVTATADQDSEEPDEASNGERRLT
DFRHLAELLQQKATEIDGISALLNWYEQQLIDNTGTDEQQLRLESEQNLVQIVTIHKSKGLEYPVCFIPFVSLARDNRRR
PTPMLYHRTDADGAQELVWDIEGTDEGWEQAKQETLAEDLRLLYVALTRPVYLCYLYIANHSRMLKAGIKSQLHETAIGY
LLGVTDAGCDFARLHSAAQALLNGVESNAQAISVECVADNIADNKLHTGETQSHTLNARNVTRQYRTPWRVGSYSGLVKN
APHAKASPGADDEVSAVFGAEPANSLSESSWQDSADVPQLPLLNRFSFERGANAGSFMHLVLELIDFTQAKIDLPRELPK
AMLQYGIAPEWQTVLQDWYMEILQAPLALMAQDNQLINPELCLAALVPQHTLVEMEFYLPLNRLKDAELNQLLGQFGYDT
ALHFDELQGMLKGFIDLTFEYQGKFYIADYKSNHLGDTIQAYHYGALKQAISDHRYDLQYILYSLALHRYLAMRLPNYDY
DIHIGGCYYLFLRGMSVQYPGFGVYYDKPPKALILALDALFNRSQDESHMSQQNTGAMA

Sequences:
NA

Specific function: NA

COG id: COG1074

COG function: function code L; ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA