| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 24373056
GI number:
Start: 1545994
End: 1548441
Strand: Reverse
Name: Not Available
Synonym: SO_1482
Alternate gene names: NA
Gene position: NA
Preceding gene: 24373061
Following gene: 24373050
Centisome position: NA
GC content: NA
Gene sequence:
>2448_bases ATGCCAGTATCACAGCCTATATTTCGCTTATCATTAATCACACTCGCCTGTTTCAGCGCTTTAGCGCAAAACGTCTACGC CGAAAATACATCCACTGCACCCGACACCAACGTCGAGCGTATAACGGTTTATGGCAAACAAAACTCAGTGGTGAAGAACT CAGGACTCGCGACTAAGTCAGATATGTCTTTGATGGAAACACCCGCCGCCGTGGTGGTAGTAGACCAAGAACTGATCAGT GCTCAAGGGGTCGATAATCTCCAAGATTTAATTCGCAATATCAGCGGAGTGACTCAAGCGGGTAATAATTACGGCATAGG TGATAACTTAGTTATCCGTGGACTTGGTGCAAACTACACCTTTGATGGTATGTATGGCGGTGCAGGCCTAGGCAACACCT TTAACCCAACACGTTCTTTAACCAATGTAGAATCCGTTGAAGTGTTAAAAGGCCCCGCAACAGGCCTATACGGTATGGGC AGCGCAGGCGGCGTTATCAACCTAATTGAAAAGAAACCACAATTTGAGTCCAAGCACAAAATCACCACTGAAGTTGGTCA ATGGGACACCTACTCACTCGCCATCGACAGTACGGGTGGAATAACCGATGATGTAGCTTATCGTTTAGTGGCCAAAACCG CCCGCAGTGAGGGCTATCGTGATTTAGGTGCTGACCGTGATGAGGTTTTCGGCTCACTAAAATGGGTATTAAGTGATAGC CAAGATGTGATGCTGTCGGGCGCGTATATCAAAGACGCCATTGCCGTTGACTCTATTGGCCATCCTATCCGTATATATAA CGCCGATTCTGTCGGCGGTAAAACCGCAGGCGAAGTGACTTGGCAAGATTTGATTAACGATCCAAATGGTCAAGGTATAC AACTGACCGACGAGCAACGTCAGCAATTAGCAGCATCACTGGCCAGTGGTGATGGCTTAACCCCCTATGCTTTTGGTGAT GCAGGATTAATTTCCCCCATGGCCAAAGATAATGAAGGCGAAGAATTACGCTTCAAGCTGACCCACAATATCTACTTTAC CGATAATCTGTTCCTCAACCAGCAATTGCAATATCGTGACTACACCACAGGTTTTGCCCGTCAAACTGGCGCTTACAACT ATGTGTACTGGAATAATAAAGGCAAGATAAACGCAGATCCCCGCGCCCCACTCGTTGAAAATGGCGTGCTCTATCCCTTT GCTGCAAGACGTCAGGAATACCGTAAACTCGATGCAGAAGAAACCTCATGGCAGTATTTTGCCGACCTGCGCTATGACTT CCAAATCGGCAATATCGATAATGAGCTTTTGGTAAATGCTAACTACGAAGATCGCACGATTCGACTAGAACAATTCTCGA TTTACGATGCGGATCAAGTCATTAAAGACAAGAAAAACAACGTCATCTACCGTGGTTCGCTGCCCTATATTTATGATATT CGCAATCCTAATTGGGGAACGGGTAAATTTGAGGACTACGATCCACTCAAAACCGCCAACTACAATAAAAAAGTCAGCGC TTGGGGCTTAGGCGTGCAGCATGTGGGTTATTTAGGTTATGGCTTTACCACTCGTGTTGGCGTGGCCTTTAACGAAATCA AACAAAGCTATGAGCATTTAGGTCTCGATGCGCGTTATAGCGCAGGTCAAGCGAGCCCAACTCCTGAAGCCGATAGCAAA GATAACGGTATTACCTATAACTTGGGCTTAACCTATATGCCCATCGACGATTTATCGTTTTTTGTTAACCACTCTAAAGG ACGTACCGCCTATAGCATTTTAGGCTCAATCACAGGGAAAAATACCGACCGCGAAGACTCAGAATCTGTCAGTAATGATC TCGGCATGCGCTTTAAAGCCTTTGATGATCAGATGCTGGCTTCGCTCGTCTTCTTTAAAAGCTCACGGACTAATGTCCCT TACAACAACCCAGACTATAACGCCGGCGTGTCAACTGCCGATGTACCAGTGTATTTTTACGATGGCAGTGAAGATACCCA AGGGGTTGAGCTGGATCTCAATGCCCACCTAAATGAGCAATGGCGCGTTAACCTTAATGGCATGTATCAAGACGCAAGGG ATAAACAAAACCCGAATGATAAAGCCAACTATGACAGCCGTCAAAAAGGGGTACCTTATGTCACCGCCAGTGCTTGGGTA ACCTATGGCGCAGACTGGTTTGCCTTATCAAGCCCAATTGAGCTGAGTTTAGGCGCCAAATATGTGGATGAAAGAAGCAC TCACTCAAAAGATTTTGGCATCCCTGATGGCTATGTCCCTAGTTATACTCTGGTAGATTCAGCAGTCAGTTACGCTACCG ACTCCTGGAAGTTACAATTGAATATCAACAACCTATTCAATAAAGACTATTACAGCAAAGCCATGTTCCTCGGCGGTATG CCAGGCGAAGAGCGCAATGTGAAACTGCAATATAGCTACAGTTTCTAA
Upstream 100 bases:
>100_bases AAGATGACAAGCCTTTGGGACCTAATGTTCATCAATCAAAGGTTGCAAAGAGGATGGAAATCATTATCATTCGCAACAAT TCTGTTTGGGGGAACTTTAC
Downstream 100 bases:
>100_bases ACGTTTTCCTTAAACCCATAAACAATAAGAGAGCCCATTGGCTCTCTTATTTATTTTAGAATATTTAACTCACATTCTCC CTGTCGCCACGCATCAAAGA
Product: TonB-dependent receptor, putative
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>815_residues MPVSQPIFRLSLITLACFSALAQNVYAENTSTAPDTNVERITVYGKQNSVVKNSGLATKSDMSLMETPAAVVVVDQELIS AQGVDNLQDLIRNISGVTQAGNNYGIGDNLVIRGLGANYTFDGMYGGAGLGNTFNPTRSLTNVESVEVLKGPATGLYGMG SAGGVINLIEKKPQFESKHKITTEVGQWDTYSLAIDSTGGITDDVAYRLVAKTARSEGYRDLGADRDEVFGSLKWVLSDS QDVMLSGAYIKDAIAVDSIGHPIRIYNADSVGGKTAGEVTWQDLINDPNGQGIQLTDEQRQQLAASLASGDGLTPYAFGD AGLISPMAKDNEGEELRFKLTHNIYFTDNLFLNQQLQYRDYTTGFARQTGAYNYVYWNNKGKINADPRAPLVENGVLYPF AARRQEYRKLDAEETSWQYFADLRYDFQIGNIDNELLVNANYEDRTIRLEQFSIYDADQVIKDKKNNVIYRGSLPYIYDI RNPNWGTGKFEDYDPLKTANYNKKVSAWGLGVQHVGYLGYGFTTRVGVAFNEIKQSYEHLGLDARYSAGQASPTPEADSK DNGITYNLGLTYMPIDDLSFFVNHSKGRTAYSILGSITGKNTDREDSESVSNDLGMRFKAFDDQMLASLVFFKSSRTNVP YNNPDYNAGVSTADVPVYFYDGSEDTQGVELDLNAHLNEQWRVNLNGMYQDARDKQNPNDKANYDSRQKGVPYVTASAWV TYGADWFALSSPIELSLGAKYVDERSTHSKDFGIPDGYVPSYTLVDSAVSYATDSWKLQLNINNLFNKDYYSKAMFLGGM PGEERNVKLQYSYSF
Sequences:
NA
Specific function: NA
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA