Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24372887

GI number:

Start: 1359989

End: 1363012

Strand: Direct

Name: Not Available

Synonym: SO_1309

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372882

Following gene: 24372889

Centisome position: NA

GC content: NA

Gene sequence:

>3024_bases
ATGAAGAAGAAACTATTGACCTTAGCAATACAAGCATCAATGTTTGGTATTGTTCCTTCGGTAGCATGGGCTGCCGAACC
GATAGAAGTGAAAGCAGTTAAGGAAAATGCGACTCGAAATGAAACCGAAACCGCGGATAAAAACGATGGCATCGAAAAGG
TCACGGTAACGGGTTCGCGGATTAAGCGAGATAGTTTTTCATTAAGTACGCCTTTACAGGGCTTGGATGCCAAGGATATC
GCCGATAGCGGTATCGGCTCATTGGCGGATATTTTAGTTGACCAAATTCCGGCCTTGGCGGAAGGGGTGAGTAGCACTAA
TAGCCAATCGAGTGTGCAAAATACCGGCCTATCAACCATTGACCTACGTAACTTAGGTACGGATCGTACCTTAACCCTTA
TTGATGGTCGTCGCGTTGTTTCTAACAGTTACAGTGGTAACTACGTCAGTTTAAGTACGATTCCAGCAGCCATGGTCGAT
AAGGTCGAAATCATTACTGGCGGTGCATCTGCTGTGTATGGTTCGGATGCGATTGCAGGCGTGGTCAATATTATCACCCA
GCAAAACAAGACTGGGTTTGAGATTAACGCCCGTGGTGGTGAAACGACTGAAGGTGGCGGCCGTGAAACCACAGTTGATG
CTGGTTATGGTGCTGATTTCAATAGTGATAAAGGTTACATTTACGCCAGTGCTACCTATGATAAACAGCATGGGTTATTC
GCCACTGACAGGGAACGAGCCCTGTATGAATCAAGCTTTGCCTACGATAAAAAGCAAATGTGTAACACCATGAATACCGC
TGATGGTTATCAGTGTATGCGGGATATCACTCCGGAAGATTGGCGTGAGCGCAGCAACGATATCGTTGGTGGCCGCTTTA
AGTCGAACGCTTGGTGGTACGATGGCACTGAACTTAAAACTGACTTCAAAGAAGAACGTGATGGTTATAACGGTTATACC
ACGGGTCTATTGAAGGTGCCTGAGGATACCTTGGCGACAGCGGTCAAAGTAAACTATGACCTTAGTGAAAGTGTTCGTGC
GAATGCACAAGTACAATTTAGTCGTAATACTGCGTTTCGCCGTACCGACGCAGAAGGTCAAGACTATAACGATGCTGAGC
TGTATATCGATCCCATCACTGGGTTACCAGGGATGATTGATGCGGGCAGTATTTTAGCCAATAACCCTTATATACCCGCT
GAAATTGCCGCGACAGGGGGGAAAAGTATTACCTGGGATCGTCGTTTCGAAGAGGTTGGGCCTGTTGAAAGTGATAACGA
GCGTACCACGCTGCGTACTTGGGCGGGTTTACAGGGGGATTTGTTTGAAACTTGGACTTGGGATGCGTCAGTGGGCTACG
GTCAGTTCGAGCAGCGTCAACGCCGTAGCAATGAGATCAGCATTCGTCGTTTAAGAAATGCCTTGAATGCCGTATATGCC
GCTGATGGTGTCACTATTCAATGTGCCAGCGAAGCCGCCAGAGCTGAAGGCTGTGTGCCCGTCAATATCTTTGGTGAAGG
CTCTATCAGCAAGGAAGGGGCGGACTATATTCGCGCTAATCCCTATATCAATACCGATATCACTCAATTCAATGCGTTAG
GGTATATTTCTGGCGAGTTGTTTGAGCTCCCTGCGGGTGGTGTGCAATCGGCATTCGGGATGGAGTATCGCCGTGATACG
CAGGCTGTCGATACCGATAAGGCGATGCGTGGTGATGCGATTACCTTTAACGATGTTCCTCCCTTTGAAGGTGATGTCAC
CGTATGGGAAGCCTTTGGTGAGGCGAATCTACCCTTATTAAGGGATATGAGCTTCGCTAATAAGCTTGATGTGGATGTGT
CCTTGCGTCTTGCGGATTACAGTCAGAAAAACATTGATTTAATGTCGAGCTACCGTACCGGCATACTGTGGGAACCCATT
GCAAACTATGCTTTACGTGCCAACTACTCACGTTCACAACGTGCGCCGAATATCACTGAGCTCATCTCTCCACCCCGTGG
TGATTACGACAGTATTCGCGATATTTGTAATGGTGTGACGGCAACCTCAACAGGCGCTGGGCATGATAGCTGTCGTCTCG
ATCCTGGGATTGCTGTGGCTATTGCGAGTACTGGCACCTTTAAGGCGGAAACGGGCTCTAAGTATTCTCCTAACGCAGGT
AATGAAAACCTGACCGAAGAAACGGCGGATACCTACACCTTAGGTTTTACCATGGCGCCAGCCTTCCTTGAAGGCTTTAA
CCTCGCGGTTGATTATTACGATATCAAAGTTGCTGATGCTATTGGTTCATTAAGCAACGAGGACATTCTGGCTGAGTGTT
ATAACTCGAGTAATCCTTATGGTGCAGGTAATGAGTACTGTCAGGATATCACTCGTGATACTGAGGGCCAAATCACCCAG
GTTATTCAGCAGGAACTGAACCTGAATGACATAGTTACTCGTGGTATCGACTTCGCAATGGCCTACGAGTGGGAACTGGC
TGATTATGGTGAACTGAGCTTAAACACTAACTGGACCCACGTGTTGGAATACAGCTCAAGTTACTACGGCGCTGATGGTT
TAGTGGCAGAGGATTATGTGGGTGAGCTTACTAGCGGGATTTTTGAAGACCGAGGCACGCTGTCATTAACGTGGAGTAAC
GATGATTGGCGTGTGCGTTGGAGCGCGAAGTATAAGAGCGCAATGGTTGATAGCCATGACCGAGTTGAAGAATGGAATGT
GCTGAAAGCCGAAAACCAAGCCAAACTCGACGCCGGTGATGCCAGTGCTGTGGCGAACCCAGAAACGCCAGAGTTCTTGT
TCTATGGCTCGTATATCACTCATGATTTGTCAGTGTCTTACACCATGGACGTGAGTCAGGCTGAATTACGTTTATACGGC
GGTTTACGCAATATTTTCGACAACCAAGGTCCTTGGGTCGCTGATGGTGGCGACTTAATTGAAACGGGTACCGGTAACTA
CAGCAGTGCCTACGGCGGTGGTGTAGGGCGTTATGCCTACCTAGGTGCAGAGCTTAAGTTCTAA

Upstream 100 bases:

>100_bases
GATGATGAAAATCGCTGGCGAAGGCATTGGGCTAATTTAAGTAACCGCTCTACATAACAACAAAAATGGTTTGCGATGTC
TCAAAGTGAAGGTGGGAAGG

Downstream 100 bases:

>100_bases
AGGTCAGTTAACTTAAGTTGGTTAAACCGCATGTGGTTCCCTGCATGCGGTTTTTTATTGACAATTAAATGGCTTAAGCA
AGAAAGGAACTGTTGTTGGC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1007_residues
MKKKLLTLAIQASMFGIVPSVAWAAEPIEVKAVKENATRNETETADKNDGIEKVTVTGSRIKRDSFSLSTPLQGLDAKDI
ADSGIGSLADILVDQIPALAEGVSSTNSQSSVQNTGLSTIDLRNLGTDRTLTLIDGRRVVSNSYSGNYVSLSTIPAAMVD
KVEIITGGASAVYGSDAIAGVVNIITQQNKTGFEINARGGETTEGGGRETTVDAGYGADFNSDKGYIYASATYDKQHGLF
ATDRERALYESSFAYDKKQMCNTMNTADGYQCMRDITPEDWRERSNDIVGGRFKSNAWWYDGTELKTDFKEERDGYNGYT
TGLLKVPEDTLATAVKVNYDLSESVRANAQVQFSRNTAFRRTDAEGQDYNDAELYIDPITGLPGMIDAGSILANNPYIPA
EIAATGGKSITWDRRFEEVGPVESDNERTTLRTWAGLQGDLFETWTWDASVGYGQFEQRQRRSNEISIRRLRNALNAVYA
ADGVTIQCASEAARAEGCVPVNIFGEGSISKEGADYIRANPYINTDITQFNALGYISGELFELPAGGVQSAFGMEYRRDT
QAVDTDKAMRGDAITFNDVPPFEGDVTVWEAFGEANLPLLRDMSFANKLDVDVSLRLADYSQKNIDLMSSYRTGILWEPI
ANYALRANYSRSQRAPNITELISPPRGDYDSIRDICNGVTATSTGAGHDSCRLDPGIAVAIASTGTFKAETGSKYSPNAG
NENLTEETADTYTLGFTMAPAFLEGFNLAVDYYDIKVADAIGSLSNEDILAECYNSSNPYGAGNEYCQDITRDTEGQITQ
VIQQELNLNDIVTRGIDFAMAYEWELADYGELSLNTNWTHVLEYSSSYYGADGLVAEDYVGELTSGIFEDRGTLSLTWSN
DDWRVRWSAKYKSAMVDSHDRVEEWNVLKAENQAKLDAGDASAVANPETPEFLFYGSYITHDLSVSYTMDVSQAELRLYG
GLRNIFDNQGPWVADGGDLIETGTGNYSSAYGGGVGRYAYLGAELKF

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA