Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24372836

GI number:

Start: 1304327

End: 1305856

Strand: Direct

Name: Not Available

Synonym: SO_1255

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372835

Following gene: 24372840

Centisome position: NA

GC content: NA

Gene sequence:

>1530_bases
ATGATCATTGTGGGATTTATCGGTTTAGTACTGGTTATCATCCTGAGCGCCGTGTTGTCTCTTTTACGTGCAAGATCCGA
AGCGTTGCGCCAACAGCAGCAATTCTTAGCGCAGCTATGCCCTCAACTTGAAAGACAAAAAACGGATCGTAGCCCGCTTA
ATATTCCTGTGGTGCCGCAAGAGTGTGAGCCTCTCTATCATGCCTTAAATGAGATGTTAGCCGCCTTACCCGCGGGGATG
GGTAAGGATAAGCTCACAGGGTTAATTAATCGTGTTGGACTTAAAAGGACTCTCGCTTCGTTAATGCCAATTACTCAAGG
CACTTTAGTGCTGATTGATATTTATCGTTTTCGCTATGTGAATGATCTTTTGGGGTTTGTGTTTGGTGATATTCTGCTAA
AACAGTTTGCCGAACGTTTAACGAGCTTAAGTCTTAAACCTAAACTGATTGCGCGCCTAAACGGTGATGAGTTTTTTCTC
TATTATGAGCAAAGTTTGTCTCAGGAGCAGTTACTGCATTTACGCGGGCGTTTACAGGTCCCCTTTAATATTAAAGACAC
ACCGGTCAGTGTGCGTCTGCAAATTGGTTGCTTACAATTAGCACAGCACCATGCCGATGTGAGCAACATGCTCAGAAGGC
TTGATTTGGCGCTTAAAAAAGCCCGCAGTACTCGGATTGCGATTGCCTGTTACAGTGAAAATGACGACATTCGCCAACTG
CGGGAATTGAAGATTATTGATAGTTTGCCCAATGGCTTACAACGCAATCATTTGTACATGGTGTATCAACCTAAGCAGGA
TGTTTCATCAGAGGGATGTACCCAGGTTGAGGCACTGATCCGCTGGGAACATGAAGAGTTAGGGGTTATTTCACCTGGGG
AGTTTATCCCACTTGCCGAATGTGCGGGCATGATTGATTTAGTGAGCCATTGGGCGTTAGAACAAGTCCTACAGCAACAG
GTAAAATGGCGACTGGCGGGAATTTCTGTTTGTGTCGCATTGAATTTATCTACTCGCGATCTCGATAGTGAAACCTTACC
CCATGAACTCGATGCGCGCCTAAAGCATTATCAGTTACCGCCAGAATGCTTAATGATTGAAATTACAGAGAGCACTTTGA
TGGCGGATTTAAATAAAGCCGTGGATACCCTAGTGCAAATCCGCCGCCTTGGAATACATCTCGCTATCGATGATTTTGGT
ACTGGTCATTCTTCTCTGGCTTATTTGAAACATTTACCCGCAAACGAAGTGAAGATAGATAAAGTGTTTCTTCAGGATCT
TAAACCGAACCAACCCTCAGAATATATCCTTGAGGCCAGCGTCAATATTGCTAAAAAACTCGGATATGAGGTGACGGTCG
AAGGGGTTGAAACCCAAGAGGTGCGCGATCTGTTAGTCAAGATGGGGGTCGATCGTATTCAAGGTCTATGCTATGCCAAG
CCTATGCGGGCGGTAGAGCTTGAAATGCACTGGCATCGACTGTGCCCTGCGCCCAAAATGCTCAGCGCCAATTTGGGATC
ACATCCCTAA

Upstream 100 bases:

>100_bases
TCAAAGAGAGTTACCAATAGTTGTTGGATTTGAAGTAAGCCAATCAGGTCCTAAAGGAAATATTGGTAATTAGCTAATGC
GGTAAGATTGAGGCCTGAGT

Downstream 100 bases:

>100_bases
GCTTAATTGGGTTATTAACTCTGCAGGCATGGGGGCGAGTTGTCTCGCTTGGTTCATACAGACCATTTCAATGGTAGCCG
TGACTGCCGGTTTTTTGCCG

Product: cyclic nucleotide phosphodiesterase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>509_residues
MIIVGFIGLVLVIILSAVLSLLRARSEALRQQQQFLAQLCPQLERQKTDRSPLNIPVVPQECEPLYHALNEMLAALPAGM
GKDKLTGLINRVGLKRTLASLMPITQGTLVLIDIYRFRYVNDLLGFVFGDILLKQFAERLTSLSLKPKLIARLNGDEFFL
YYEQSLSQEQLLHLRGRLQVPFNIKDTPVSVRLQIGCLQLAQHHADVSNMLRRLDLALKKARSTRIAIACYSENDDIRQL
RELKIIDSLPNGLQRNHLYMVYQPKQDVSSEGCTQVEALIRWEHEELGVISPGEFIPLAECAGMIDLVSHWALEQVLQQQ
VKWRLAGISVCVALNLSTRDLDSETLPHELDARLKHYQLPPECLMIEITESTLMADLNKAVDTLVQIRRLGIHLAIDDFG
TGHSSLAYLKHLPANEVKIDKVFLQDLKPNQPSEYILEASVNIAKKLGYEVTVEGVETQEVRDLLVKMGVDRIQGLCYAK
PMRAVELEMHWHRLCPAPKMLSANLGSHP

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA