Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is holA

Identifier: 24372755

GI number:

Start: 1214181

End: 1215212

Strand: Reverse

Name: holA

Synonym: SO_1172

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372756

Following gene: 24372754

Centisome position: NA

GC content: NA

Gene sequence:

>1032_bases
ATGCGTGTTTATCCAGATCAACTCTCCCGCCACCTCAATCCGCTTCACGCTTGTTATCTAATTTTTGGTGATGATCCTTG
GTTGCTCGAAACCTCCAAGGATCAGATCCGCCAAGCAGCAAAACGCCAAGGCTTTGAAGAGCGCGTCCAATTAATTCAAG
AAACCGGTTTTAATTGGGGCGACTTAACTCAGGAATGGCAGGCCATGAGCCTGTTTTCCAGCCGGCGCATTATTGAGCTT
ACCTTGCCGAGCGCCAAGCCTGGAGCCGACGGCTCTGCGGCGCTGCAATCTTTGCTGCAAACCCCCAGTCCAGATGTACT
GCTGATCCTCGAAGGCCCAAAACTGGCCAGCGAGCAAACCAACAGTAAATGGTTCAAAACGCTGGACAGCTTAGGAATTT
ATTTACCCTGCACTACGCCAGAAGGCGACCAATTCAGACGTTGGCTCGACTCTCGTATCGCGCATTTTAAGCTTAATTTA
CAGCCCGATGCGCGCGCCATGTTGTACTCCCTCTACGAAGGGAATTTACTCGCCGCCGATCAAGCCATGCAGTTGCTACA
ACTGTTAAGTCCAAGCAAGCCTATCGGTGCTGACGAGTTAAGCCACTACTTTGAAGATCAGTCCCGCTTTACCGTGTTTC
AACTCACCGATGCACTGCTGAATAATCGTCAAGACAGTGCCCAACATATGCTTGCCCAGCTTAACGGTGAAGGCACGGCC
ATGCCGATTTTACTTTGGGCTTTATTTAAAGAGCTGCAATTACTACTCAGCCTAAAGAGTGAACAGGCGCAAGGTTCGCC
GCTCAATAGCCTTTTTGGTAAGCATCGAATTTGGGATAAGCGCAAACCGCTGTACCAAACTGCCTTGCAGCGCTTAAGCC
TTGCACAAATCGAACATATGCTCGCCTTTGCGTCCAAGCTAGAATTGAACTTAAAGCAATTAGGCCATGAAGATTGGACA
GGGCTCAGTCATCTGTGCTTATTATTCGATCCTAAAGCCCACAGTCATCTAGCCCATATCAACTTAGATTAA

Upstream 100 bases:

>100_bases
GCGGCCGATAGGATTTTGCAATCCATGGCCAGCACAGAGGTTAATTAATGCAGGGCCCAAATTAATGTGGCACTGCTATA
ACATGTGGAGAGTTGCTTAA

Downstream 100 bases:

>100_bases
GGCAGCGTGTTAATGCGTATCGGAATTTTAGGTGGCACCTTTGATCCCATACATTACGGCCATATTCGCCCCGCGATGGA
AGTCAAAGCGAGTCTCAAGC

Product: DNA polymerase III, delta subunit

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>343_residues
MRVYPDQLSRHLNPLHACYLIFGDDPWLLETSKDQIRQAAKRQGFEERVQLIQETGFNWGDLTQEWQAMSLFSSRRIIEL
TLPSAKPGADGSAALQSLLQTPSPDVLLILEGPKLASEQTNSKWFKTLDSLGIYLPCTTPEGDQFRRWLDSRIAHFKLNL
QPDARAMLYSLYEGNLLAADQAMQLLQLLSPSKPIGADELSHYFEDQSRFTVFQLTDALLNNRQDSAQHMLAQLNGEGTA
MPILLWALFKELQLLLSLKSEQAQGSPLNSLFGKHRIWDKRKPLYQTALQRLSLAQIEHMLAFASKLELNLKQLGHEDWT
GLSHLCLLFDPKAHSHLAHINLD

Sequences:
NA

Specific function: NA

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA