| Definition | Shewanella oneidensis MR-1, complete genome. |
|---|---|
| Accession | NC_004347 |
| Length | 4,969,803 |
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The map label for this gene is carB
Identifier: 24372725
GI number:
Start: 1182946
End: 1186170
Strand: Direct
Name: carB
Synonym: SO_1142
Alternate gene names: NA
Gene position: NA
Preceding gene: 24372724
Following gene: 24372731
Centisome position: NA
GC content: NA
Gene sequence:
>3225_bases ATGCCAAAACGTACAGATATAAAGAGTATTCTTATCCTAGGTGCAGGCCCGATTGTCATTGGTCAGGCATGTGAATTTGA CTATTCAGGCGCTCAAGCCTGTAAAGCCCTGCGTGAAGAAGGTTACCGCGTCATTCTGGTGAACTCTAACCCTGCCACCA TTATGACCGACCCTGAAATGGCCGATGCCACTTATATCGAGCCAATTCAATGGGAAGTAGTACGTAACATTATCGCCAAA GAACGCCCTGACGCGATTCTGCCCACCATGGGCGGTCAAACTGCACTGAACTGCGCACTCGAGCTTGAAGCCAAAGGCGT ACTGGCCGAATTTAACGTGGAAATGATCGGCGCGACCGCCGACGCGATTGATAAAGCAGAAGATCGTAGCCGTTTCGACA AAGCCATGAAGAGCATTGGCTTAGAATGTCCACGCGCGGGCATCGCCCACAGCATGGAAGAAGCCTATGGCGTTCTTGAG CAAGTGGGTTTCCCTTGTATTATCCGCCCATCGTTCACTATGGGTGGTTCAGGTGGTGGTATCGCCTATAACAAGGAAGA GTTCGAAGAAATCTGTTCTCAAGGCTTAGATTTATCGCCAACCAAAGAGCTACTCATCGACGAGAGCTTAATTGGTTGGA AAGAATACGAGATGGAAGTGGTTCGTGATCGTAACGACAACTGCATCATCGTGTGTTCTATCGAAAACTTCGACCCAATG GGTGTGCATACTGGCGACTCTATCACAGTAGCACCCGCGCAAACGCTGACTGACAAAGAATACCAAATCATGCGTAATGC CTCTATGGCCGTACTGCGTGAGATTGGTGTTGAAACCGGTGGTTCTAACGTACAGTTTGGTATCAACCCGAAAGATGGCC GTATGGTGATCATCGAGATGAACCCACGGGTATCGCGTTCATCTGCTCTGGCATCAAAAGCAACTGGCTTCCCGATTGCA AAAATCGCGGCCAAGTTAGCGGTGGGTTTCACCCTCGATGAGCTGATGAACGACATTACTGGTGGTCGCACACCAGCCTC GTTTGAACCTGCAATCGATTACGTTGTGACTAAAGTCCCTCGCTTTAACTTTGAAAAGTTCGCCGGTTCCAACGATCGCT TAACCACTCAGATGAAATCTGTGGGTGAAGTGATGGCAATTGGCCGTACTTTCCAAGAGTCACTGCAAAAGGCATTACGT GGTTTAGAAGTGAATCGTCACGGTTTAGACCCTATTACTGACATGTCTAAGCCAGAAGCAATGGCCCGTATTCGCCTCGA GCTGAAAGAGCCTGGTTGTGACCGCATTTGGTACATCGCTGATGCGATGCGCGCGGGATTGACGCTCGATGAAATTTTCC GTTTAACCAATATCGACCCTTGGTTCTTGGTACAAATTGAAGAGTTAATCAAGCTTGAAGGTCAAGTGGCTGAAGCGGGG CTGGCTGGTTTAAACGAAGAGCTGCTGCGCAAACTCAAGCGTAAAGGCTTTGCCGATGCGCGTCTGGCCGTCGTACTGGG TGTAAACGAGAGCGAAGTTCGTAAACTGCGTGACCGTTTCGATATCCACCCAGTCTACAAGCGCGTAGATACCTGTGCGG CCGAGTTTGCGACTGACACCGCTTACATGTACTCAACCTACGAGGAAGAGTGTGAAGCCAATCCATCTAACCGTGACAAA ATCATGGTGTTAGGTGGTGGTCCAAACCGTATTGGTCAAGGTATCGAATTCGATTACTGCTGTGTGCACGCGGCATTAGC ACTGCGTGAAGACGGTTATGAAACCATCATGGTGAACTGTAACCCTGAAACCGTTTCAACCGACTACGACACGTCAGACC GTCTGTATTTCGAGCCTGTTACTTTAGAAGACGTGTTAGAAATCGTCCGTATCGAGAAGCCAAAAGGCGTTATCGTACAG TACGGTGGTCAAACTCCGCTAAAACTGGCTCGCGCTCTTGAGGCTGCGGGTGTGCCCATTATTGGTACTAGCCCAGATGC AATTGACCGCGCTGAAGACCGTGAGCGTTTCCAACAGGCGATTCAACGTCTGGAAATGAAACAGCCTGAAAACGATACCG TGACCACGGTAGAAGGTGCAGTGATTGCCGCAGAACGTATCGGTTATCCGCTAGTGGTGCGTCCATCCTACGTACTGGGC GGCCGCGCGATGGAAATCGTTTACGACCAACAGGATTTACTGCGCTACTTTAACGAAGCCGTCAGCGTATCTAACGCTTC ACCAGTACTGTTAGACCACTTCCTAGACGATGCTATCGAAGTGGATATCGACGCAGTATGTGACGGCGAAACCGTAGTTA TCGGCGCCATCATGGAACATATCGAGCAGGCTGGGGTTCACTCAGGTGACTCTGGTTGTTCTCTGCCACCTTATACCTTA AGCCAAGAAATCCAAGATCGCATGCGTGTGCAAGTCGGCAAGTTGGCGATGGAGTTAGGTGTTGTCGGTCTAATGAACGT ACAGTTTGCCGTGAAGAATAACGAAATCTACATGATTGAAGTTAATCCACGTGCCGCCCGTACTGTGCCATTTGTATCGA AAGCGACTGGTGTACCTTTAGCGAAGATTGCCGCCCGTGTGATGGCAGGTCAAAGTTTGAAGGCGCAAAACTTTACTCAG GAAGTGATCCCACCTTTCTATTCAGTGAAAGAAGTGGTACTGCCATTTAACAAGTTCCCTGGCGTGGACCCACTGTTAGG CCCAGAAATGCGCTCGACGGGTGAGGTGATGGGTGTGGGCGATACCTTCGCCGAAGCCTATGCTAAGGCGCAGTTAGGTG CGACTTCTGAAGTGCCTAAGTCTGGTCGTGCGCTGCTATCTGTGCGTAACAGCGACAAGAAACGCGTTGCCGACTTAGCC GCTAAGCTGATTGAGCTGGGTTATCAAATCGATGCGACCCACGGTACAGCGGTTATCCTAGGTGAAGCGGGGATCAACCC TCGCTTAGTGAACAAGGTACACGAAGGTCGTCCACACATTCTTGACCGCATCAAGAACGGTGAGTACACTTACATCGTGA ACACGACTGAAGGCCGTCAAGCGATTGAAGACTCGCGTCAATTACGCCGCGGTGCACTGCGTTACAAGGTGAACTACACC ACGACGATGAACGCCGCCTTTGCAACCTGTATGGCTCACGCAGCGGATGACCGCACCAATGTGACCTCAGTACAAGAGTT GCACAAGCGCATATTGGCTAAATAA
Upstream 100 bases:
>100_bases TCCGAACGATGCGGCCCCACTGTTCGATCACTTTATCGAGCTCATTGAACACTATCGTCAGAACGCTAAGTAATACGCAA GCTAGGAGAAGAGAGAAGCA
Downstream 100 bases:
>100_bases GCCGTCACGTTATGTTGCAAAAAGGCCGGGTAACTTAAGTTATCCGGCCTTTCTTTTTAAGGGGTAAAAGGTTTATAAGC CGATTCGTTCGGTTGCCATT
Product: carbamoyl phosphate synthase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1074_residues MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEMADATYIEPIQWEVVRNIIAK ERPDAILPTMGGQTALNCALELEAKGVLAEFNVEMIGATADAIDKAEDRSRFDKAMKSIGLECPRAGIAHSMEEAYGVLE QVGFPCIIRPSFTMGGSGGGIAYNKEEFEEICSQGLDLSPTKELLIDESLIGWKEYEMEVVRDRNDNCIIVCSIENFDPM GVHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIGVETGGSNVQFGINPKDGRMVIIEMNPRVSRSSALASKATGFPIA KIAAKLAVGFTLDELMNDITGGRTPASFEPAIDYVVTKVPRFNFEKFAGSNDRLTTQMKSVGEVMAIGRTFQESLQKALR GLEVNRHGLDPITDMSKPEAMARIRLELKEPGCDRIWYIADAMRAGLTLDEIFRLTNIDPWFLVQIEELIKLEGQVAEAG LAGLNEELLRKLKRKGFADARLAVVLGVNESEVRKLRDRFDIHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSNRDK IMVLGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLEDVLEIVRIEKPKGVIVQ YGGQTPLKLARALEAAGVPIIGTSPDAIDRAEDRERFQQAIQRLEMKQPENDTVTTVEGAVIAAERIGYPLVVRPSYVLG GRAMEIVYDQQDLLRYFNEAVSVSNASPVLLDHFLDDAIEVDIDAVCDGETVVIGAIMEHIEQAGVHSGDSGCSLPPYTL SQEIQDRMRVQVGKLAMELGVVGLMNVQFAVKNNEIYMIEVNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKAQNFTQ EVIPPFYSVKEVVLPFNKFPGVDPLLGPEMRSTGEVMGVGDTFAEAYAKAQLGATSEVPKSGRALLSVRNSDKKRVADLA AKLIELGYQIDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQAIEDSRQLRRGALRYKVNYT TTMNAAFATCMAHAADDRTNVTSVQELHKRILAK
Sequences:
NA
Specific function: NA
COG id: COG0458
COG function: function code EF; Carbamoylphosphate synthase large subunit (split gene in MJ)
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA