Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is cobQ

Identifier: 24372624

GI number:

Start: 1077178

End: 1078710

Strand: Direct

Name: cobQ

Synonym: SO_1038

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372623

Following gene: 24372625

Centisome position: NA

GC content: NA

Gene sequence:

>1533_bases
ATGGTGCAGGGCACCACCTCTGATGCAGGCAAAAGCACGTTGGTGGCGGGAATATGTCGATTACTGGCCCGTCAGGGCGT
CAACGTCGCGCCTTTTAAACCGCAGAATATGGCGCTCAATAGTGCCGTGACTGTTGATGGCGGCGAGATTGGCCGCGCAC
AGGCGCTGCAAGCCGCGGCCTGTTATTTAGTGCCTCATACTGATTTCAACCCGATTTTACTCAAACCCAGTTCAGATACG
GGCGCCCAAATTATTGTGCAGGGTAAAGCGTTAACGACACTCGAAGCCTCGGCTTTTTTTGGAGAAAAATCGAAAGATTA
TAAAGCCATGGCCCTTAATGCCGTGTTGGACTCCTTTGAACGCCTAGGTCAGCAATATCACACCATAGTGGTTGAAGGGG
CGGGGAGCCCAGCTGAAATCAACCTGCGTGCTGGGGATATTGCCAATATGGGCTTTGCCGAAGCGGTTGATTGCCCCGTG
ATTATTATTGCCGATATCGACAAAGGCGGCGTGTTTGCCCATTTGGTCGGGACCTTGGCGCTGTTATCCGAGTCAGAACA
GGCGCGGGTAAAGGGTTTTGTGATCAATCGCTTTCGCGGCGATATCAGCCTGTTGCAGTCTGGTATTGATTGGCTTGAGG
CGTATACGCAAAAGCCAGTATTGGGCGTGCTGCCCTATTTGCATGATTTACACTTAGACGCCGAGGATGCGCTCACTGAC
TCGCCAACTAAGCAGGCCAAGAGTTGTTTTAAGGTGCGAGTGCTGGTTTATCCGCGCACCAGTAATCACACGGATGTTGA
TCCGCTGAGGCTGCATCCCGATATCGATTTTGATTATGTGTCACTCCAGACGCAAGCCTTAGCTCAGACGCCGGAGATCG
CCGCCGATTTGCTGATTTTGCCTGGTAGTAAGAATGTCCGAGCCGATCTGGCTTTTTTACGTGAGCAGGGCTGGGATAAG
CAAATTGCTAAGCATTTGCGCTACGGCGGTAAAGTGCTGGGAATTTGTGGTGGTTATCAAATGCTGGGTGAGCGCATTGC
CGATCCGTTAGCGATTGAAGATGTGTTCGGTACTAGCCAAGGGCTAGGTTATTTACCCATCAGCACCGAATTTAAAGCCG
AAAAGCAGTTACGTTGCGTCGCAGGCGAGTTGACATTGATAGGGCAGACTGTGGCAGTCAAAGGTTATGAGATCCACTGC
GGTGAGTCCCAATATCTCACGTCCAGTGATGCCGCCAAGGGCGCGCCATTACGCTTGATAAATGAGTTAACTTGCGATGA
ACAGGCGGAAAAGTCTTTTGCCGACGGCTGTTTAAGTGAGGACGGGCAAGTGCTAGGCACTTATTTACACGGGCTATTCG
ACAGCCCTGATGCGTGCCAGTTAATTCTGCGTTGGGCGGGATTAGAAGATGCACAAGCAATTGATATTAATGCTATTCGA
GAACAACAACTGGATAGGTTGGCCGATGTATTGGCCGAACATCTAGACTTACCACAATTACAGGCAATCTTAACCGCATC
AGTTAAGCCGTAG

Upstream 100 bases:

>100_bases
CCTACCCATGCATGTAAATAAAGCGCCCGCATCCACGGTAACCGATATAGCGGCAACCTCTTGCTTGTCTCAAACACTGC
CCCAAGGCGCCAAAGTATTA

Downstream 100 bases:

>100_bases
GATGAACATCAAACCATGACAACAGCAAACGATAATAACCAAGAACAATTAAAGGCTGAACGCCACAAGGTGCGCCAACA
AAAACTCAAAGCGGGAGTTG

Product: cobyric acid synthase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>510_residues
MVQGTTSDAGKSTLVAGICRLLARQGVNVAPFKPQNMALNSAVTVDGGEIGRAQALQAAACYLVPHTDFNPILLKPSSDT
GAQIIVQGKALTTLEASAFFGEKSKDYKAMALNAVLDSFERLGQQYHTIVVEGAGSPAEINLRAGDIANMGFAEAVDCPV
IIIADIDKGGVFAHLVGTLALLSESEQARVKGFVINRFRGDISLLQSGIDWLEAYTQKPVLGVLPYLHDLHLDAEDALTD
SPTKQAKSCFKVRVLVYPRTSNHTDVDPLRLHPDIDFDYVSLQTQALAQTPEIAADLLILPGSKNVRADLAFLREQGWDK
QIAKHLRYGGKVLGICGGYQMLGERIADPLAIEDVFGTSQGLGYLPISTEFKAEKQLRCVAGELTLIGQTVAVKGYEIHC
GESQYLTSSDAAKGAPLRLINELTCDEQAEKSFADGCLSEDGQVLGTYLHGLFDSPDACQLILRWAGLEDAQAIDINAIR
EQQLDRLADVLAEHLDLPQLQAILTASVKP

Sequences:
NA

Specific function: NA

COG id: COG1492

COG function: function code H; Cobyric acid synthase

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA