Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 24372477

GI number:

Start: 917169

End: 918875

Strand: Direct

Name: Not Available

Synonym: SO_0888

Alternate gene names: NA

Gene position: NA

Preceding gene: 229220631

Following gene: 24372478

Centisome position: NA

GC content: NA

Gene sequence:

>1707_bases
ATGTTTGAAGTCACGGAAGTTTCTATTGCCGAGCTGCGTGCAGCGCTCGAATCTGGCCGTACGACGGTGGTTGAGTTGGT
GAAATCCTATTTGGCTCGAGTGGCGGCTTACGATGGTCCTGCTACTGAGACTAAGCTCAATGCGTTAGTGGTGCACAATC
CCGATGCGCTGAAAGAAGCTGAAGCCTCAGATGCGCGCCGCGCTCGAGGTGAAACCTTAAGCCCGCTTGATGGTATTCCT
TACACCGCTAAGGACAGCTATTTGGTGAAGGGACTGACGGCGGCGTCTGGCAGCCCAGCCTTTAAAGATTTAGTGGCCCA
GTACGATGCCTTTGCCGTTGAGCGCCTACGCGCTGCGGGTGCCATTTGCCTAGGCAAAACCAATATGCCTCCCATGGCTA
ATGGCGGCATGCAGCGTGGTCACTATGGCCGCGCCGAAAGCCCATACAATGCTGAGTATCTTACTGCACCGTTTGCTTCG
GGTTCTTCCAATGGGGCGGGCACGGGCACGGCGGCAAGTTATTCGGCATTCGGTCTTGCTGAAGAAACTTGGTCGAGTGG
CCGAGGCCCTGCGTCCAATAATGGTTTATGCGCCTATACACCGTCTCGCGGCGTGATTTCCGTGCGTGGTAACTGGCCGT
TAACCCCGACCATGGATGTGGTCGTGCCCTATACTCGCACCATGGCGGATATGCTCGAAGTGCTGGATGTGATTGTGGCC
GATGACCCCATTACCCGTGGCGATCTCTGGCGTCTGCAACCTTGGGTCCAAATCCCTAAAGCATCAACTGTTCGCCCAGA
ATCTTATCTGGCGCTGGCGGCTAGCGCCGATACGCTTAAGGGTAAGCGTTTTGGCGTGCCGCGCATGTACATCAATAAAG
ATGAATTGGCAGGCACTAGCGAAAATCCGGGTATTGGCGGCCCAACGGGTCAACGGATCCATACCCGCCAATCGGTGATC
GATTTGTGGGAAGCCGCGCGTAAAGCCTTAGAAGCCGCTGGCGCCGAAGTGATTGAAGTCGATTTTCCGTTGGTTTCCAA
TTGTGAAGGCGACCGCCCGGGTGCGCCGACGGTGTTTAACCGCGGCATAGTGACGCCTCAGTTCCTGCATGATGAATTAT
GGGAACTCTCGGGTTGGGCGTTCGATGAATTCCTGCGTGCTAACAATGACCCTAAACTCAACAAGCTTGAAGATGTGGTG
GGGCATTTGATATTCCCTCATGATCTTTGCACCTTGCCAAATCGTGAAGGTGACTTAGCGGCAGGCATGGAAGAGTATGT
CAACATGGCTAAGCGTGGCCTTAAATCCTTCGATCAGATCGACAGTATTCCCGATGGTCTGCGTGGCTTAGAGAAGACGC
GTAAGCTAGATCTCGAAGACTGGATGGATGGGCTAAAGCTTGATGCCGTGCTGTTCCCGACAGTGGCGGACGTGGGGCCT
GCCGATGCCCATGTGAATCCGGCTTCTGCCGATATTGCGTGGAGTAACGGGGTTTGGGTAGCAAACGGAAACCTTGCGAT
TCGTCACTTAGGCGTACCAACTGTGACTGTACCTATGGGCGTGATGGCCGATATTGGCATGCCAGTGGGTTTGACCTTTG
CGGGCCGTGCCTATGACGATAATAACCTGCTTAAATTTGCCGGTGCATTTGAGTCAACAGGTAACAGGCGCATTATTCCG
CCACGCACCCCAAAACTGGGTCAATAA

Upstream 100 bases:

>100_bases
ACTCAGCAAATCCCTGCTGGAAAGTAACCCAAGGAGAACAGCATGACGATTGATGTCACTGTTATTGCACCACAATTAGC
TTTCTGCGGGAGGGCGTAAG

Downstream 100 bases:

>100_bases
GCGCTAAACTGCCAAATATAGACTTAGCTTAGTCTTAGGGATTTATCTTCTTAGAGATTTAGCCCCATATAACGGCAAAG
TGTAGAGTCATAAAAACGGG

Product: amidase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>568_residues
MFEVTEVSIAELRAALESGRTTVVELVKSYLARVAAYDGPATETKLNALVVHNPDALKEAEASDARRARGETLSPLDGIP
YTAKDSYLVKGLTAASGSPAFKDLVAQYDAFAVERLRAAGAICLGKTNMPPMANGGMQRGHYGRAESPYNAEYLTAPFAS
GSSNGAGTGTAASYSAFGLAEETWSSGRGPASNNGLCAYTPSRGVISVRGNWPLTPTMDVVVPYTRTMADMLEVLDVIVA
DDPITRGDLWRLQPWVQIPKASTVRPESYLALAASADTLKGKRFGVPRMYINKDELAGTSENPGIGGPTGQRIHTRQSVI
DLWEAARKALEAAGAEVIEVDFPLVSNCEGDRPGAPTVFNRGIVTPQFLHDELWELSGWAFDEFLRANNDPKLNKLEDVV
GHLIFPHDLCTLPNREGDLAAGMEEYVNMAKRGLKSFDQIDSIPDGLRGLEKTRKLDLEDWMDGLKLDAVLFPTVADVGP
ADAHVNPASADIAWSNGVWVANGNLAIRHLGVPTVTVPMGVMADIGMPVGLTFAGRAYDDNNLLKFAGAFESTGNRRIIP
PRTPKLGQ

Sequences:
NA

Specific function: NA

COG id: COG0154

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA