Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 24372445

GI number:

Start: 877195

End: 879888

Strand: Reverse

Name: Not Available

Synonym: SO_0856

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372446

Following gene: 24372444

Centisome position: NA

GC content: NA

Gene sequence:

>2694_bases
ATGATGAATAACGCACTGCTAGGACATAAAGCCAATCCATACCACCACTTAAGCAAGAATGGACAATGGCTGCGTATTAC
TTGGGTACTCAAGGTATTTTTCGCCCATTATCGCCACGCGCCATTGCAGGCTGGGGCGATTTTACTCGGAATCGCCCTCG
CCGTGACGCTGCTCATCGGGGTAAAAGCCACCAACGATAATGCGATTCGTAGCTATAGTGAAGCCACAGAGCTATTAAGT
CAGCGGGCCGATGTACTGCTGACCTCACCCGTTGGCCAAGATAATCTCGATGAATCGGTGTATTTCAGTTTAAGACAGGC
TGGGATTAGCCAAAGTCTTGCGGTAGTCAGTGGCAGAGTTGCTGGCCAAAACGGCCAGTATTGGCAAATTGAAGGCAGCG
ATATTGTCGCGGCATTGACCGCCACATTAACCTCAAAAAACACTTCACCATCCTCAAATAGCAAGGCAACGGCTAATTCT
GCTGTCTCCATGGGAGATCTGCCCCTTGCAGCCCTAATGAGCGGTGAGCCTGTGGTGGTGATGAGTGACAGTCTGGCCAG
TAAAATCGCCCCCAATGGCCAGCTCAGCCTAGCCCAATCCATAGCCCCATCTACCCTAAAAGTGATCCGTGTCGATGATA
GTTGGGGACTTGGCAGCGCCATCTTGACCGATATTTCCCTCGCCCAAAACTTACTTGGGATGCAGGGCAAACTCAGTTAT
ATCGCCCTATTTAGCGATAGGGATAAGCTAGCCGCGTTAAAACAACGGCTCGACACCTTAGGTATCACCCCAGATCTCGC
CAACTACAGTCAGCAGGATCAAGGGCAAGCCTTAATGGCGCTTACCCGCAGTTTTCATTTAAATCTCAATGCGATGAGCA
TGTTAGCCTTTGTGGTTGGGCTATTTATTGCCTATAACGGCGTGCGTTACAGCCTGATGAAACGCCAACGTTTGCTGATT
CAACTGCTGCAACAGGGGCTAAAACGACTCGACGTGATGCTTGCCCTGCTCGCCGAATTACTATTTTTGGTTATCTTAGG
ATCGGTCATTGGGTTTATTTTAGGCTTACAACTCAGCCATTGGTTACAACCTATGGTTGCCATGACGTTAGAACAGCTCT
ACGGTGCCCACTTGCTGCCGGGCATTTGGCAATGGCATTGGTTAGCACAGGCGATCGCGCTCACCTTAGTGGCAGCGCTT
GCCGCTTGCTTGCCCTTATATTTTGATCTTACGCGCCAATCCCTTGCCCAAGGCGCTAACCGTTATCAACAAACTAAGGC
CCACAACCAAACCCACCAGCGGCAATTTATCTTAGCCTGTGGGTTACTCGTACTCGCGGCGATACTGTTTCCCTTCAGCC
AAAGTTACAACACCAGTTTGATATTACTAGGCATAGTGACGGTCGCGATTCCTCTGCTGTTGCCCCAAGTATTGCATTGG
GGAGTAAGCTTACTGCTCCCCTTCACTCGCCCTGGGCTTAAGCACTATTTGCTCGCCGAAACCCGCGAGCTTATCGCGCC
ACTTTCCCTTGCGATGATGGCCATTTTGCTGGCATTAAGCGCAAATGTGGCGATGAATACCCTAGTGGGCAGCTTTGAGC
AAACCCTAAGAAGTTGGTTAGAAACCCGCTTACATGCCGATTTATACCTGCGCCCCAGTGCTAACCGTATGGCTGATGTA
CGAGATAAATTAAGCCAAGATCCTCGTGTCAGCGGCCTATATCAACAATGGCAAGTCGATGCAGAGATATCGATCCAAGG
CCCAACGCCTCAAACGATCCCCGTGAATCTTATCAGCCGTGATGATGAGTCAATCAAGTACACAAGTACACTCAAGGACA
GTTTACCTGACCTATGGCAACGCTATTTTGGCGGACAATTTGTCTTGGTGAGTGAACCAATGGCGATTAAGTATCAGTTG
ATGCTGGGCGATAAAGTCACTTTAAACGTGCTCGATAAAACCACCAATAACCAAGTGGTTATCGCAGGTATTTATTACGA
TCATGGTAATACCCGCAATGAGCTCATTATTAGCCATCAACTGTGGCAACAGGCACAACTGCCACTGTTACCCATTAGCC
TTGCGGCCAGTTTTTATCCTCTGGGACAAGCTAATAAATCATCCTCATCGGTGCTAACTCAACCAATACCCACGAACGGC
AAGCGCAGTGAAGCCGAACTGGATGAACTGCAAATGCAGCTCGCCACAGAGCTGGAGTTGGCTCAGGCGCAAATTTATAG
CCAAGCCAACATAAAGGCCCAAGCCATTGCTATGTTTAAACGCACTTTTTCAATCACGTTAGTGCTCAATAGTTTAACCT
TGCTGGTGGCCGCCATTGGGCTATTTAGCGCCTGCTTAATGTTAACTCAAGCACGGCAAGCGCCACTGGCACGGCTTTAT
TCCCTAGGGGTGAGTCGCAGTAAACTTCGTACTATGGTATTTAGCCAAATGCTACTGGTTGTGGTAATCACTTGCCTGAT
TGCGATGCCTACGGGCGCTCTGCTGGGGTATTTATTAATCGATAAAATCACCCTGCAAGCCTTTGGTTGGACCATCCCAA
TGATCTGGGACTGGTTTGCTTATACCAAAGCCATCCTTATCGCACTAGTGACTTGTACCTTAGCCGTGCTCTTACCGCTT
TACTGGCAAACCCGCAGACCGCTAATCGCCAGTTTGCAGCAGGAAACCCTATGA

Upstream 100 bases:

>100_bases
CAAACCAGCATTTTGATGGTCACCCACAGCGAAGAGTGCGCCGCCTTTATGAACAAACGCTGGCATCTGTCCCACGCCGC
AGTGTCCATCTCTGGCTAGC

Downstream 100 bases:

>100_bases
ACAGTCGTCCATATACCATTACCCAATTGAAAGTGAATGGTTTATTCGCAATGAGCTTGCTTAAGTGCCGTACAAACGCA
CGCTTAATCAGTCAACTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>897_residues
MMNNALLGHKANPYHHLSKNGQWLRITWVLKVFFAHYRHAPLQAGAILLGIALAVTLLIGVKATNDNAIRSYSEATELLS
QRADVLLTSPVGQDNLDESVYFSLRQAGISQSLAVVSGRVAGQNGQYWQIEGSDIVAALTATLTSKNTSPSSNSKATANS
AVSMGDLPLAALMSGEPVVVMSDSLASKIAPNGQLSLAQSIAPSTLKVIRVDDSWGLGSAILTDISLAQNLLGMQGKLSY
IALFSDRDKLAALKQRLDTLGITPDLANYSQQDQGQALMALTRSFHLNLNAMSMLAFVVGLFIAYNGVRYSLMKRQRLLI
QLLQQGLKRLDVMLALLAELLFLVILGSVIGFILGLQLSHWLQPMVAMTLEQLYGAHLLPGIWQWHWLAQAIALTLVAAL
AACLPLYFDLTRQSLAQGANRYQQTKAHNQTHQRQFILACGLLVLAAILFPFSQSYNTSLILLGIVTVAIPLLLPQVLHW
GVSLLLPFTRPGLKHYLLAETRELIAPLSLAMMAILLALSANVAMNTLVGSFEQTLRSWLETRLHADLYLRPSANRMADV
RDKLSQDPRVSGLYQQWQVDAEISIQGPTPQTIPVNLISRDDESIKYTSTLKDSLPDLWQRYFGGQFVLVSEPMAIKYQL
MLGDKVTLNVLDKTTNNQVVIAGIYYDHGNTRNELIISHQLWQQAQLPLLPISLAASFYPLGQANKSSSSVLTQPIPTNG
KRSEAELDELQMQLATELELAQAQIYSQANIKAQAIAMFKRTFSITLVLNSLTLLVAAIGLFSACLMLTQARQAPLARLY
SLGVSRSKLRTMVFSQMLLVVVITCLIAMPTGALLGYLLIDKITLQAFGWTIPMIWDWFAYTKAILIALVTCTLAVLLPL
YWQTRRPLIASLQQETL

Sequences:
NA

Specific function: NA

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA