Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24372293

GI number:

Start: 719084

End: 720442

Strand: Reverse

Name: Not Available

Synonym: SO_0702

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372298

Following gene: 24372288

Centisome position: NA

GC content: NA

Gene sequence:

>1359_bases
ATGAAAGACAGACACGGGCTGCTTAGCGCGCCAATTGGTCGTGTACTGCTCAACATGAGCCTCCCCAACTTGATTGGCAT
TATGACCATTCTCGGGTTTAGCCTTGCTGACACTTTTTTTATCAGCCAGTTAGGGACAGAAGCCTTAGCAGCGATCAGTT
TTACTTTTCCAGTAACCTTGATTATTTCCAGCATTGCCATTGGCGTGGGTGCTGGGGTATCGACCAATCTTGGACGGCTG
ATTGGTTCAGGTAACGCCCCGCAGGCAAAGGTTTTTTTGCACGATGCGCTGCTGCTCACTTTTATCCTTATCGCCAGTTT
ATCCGCCCTTGGCAGCATTTTTATCGAGCCACTGTTTAGTTTGCTTGGCGCCAATGAAACCAGTTTGCCGCTCATTCATG
ACTATATGATGTATTGGTATGTGGGCGCGCCGCTGTTGGTGTTATTAATGGTGGGCAACCAAGGCCTACGTTCGACGGGA
GACACCCGCTCCCCGGCGATGATTATGACGCTGGCGGCGATCATTAACTTAATCCTCGATCCTTTGCTTATCTTCGGCAT
TGGGCCTTTTCCCCGTTTAGAGATCCAAGGTGCGGCAATTGCGACCCTGTTCTCATGGCTTGTCGCGTTGTCGCTCTCGG
GTTATTTGCTGATCATTAAGCATCGAATGCTTGAGCGGGCGGCATTTGATATCGATAGAATGCGCGCCAATTGGAGCAAG
CTTGCCCATATCGCCCAACCTGCGGCTTTGATGAATTTAATCAATCCACTGGCCAATGCGGTGATCATGGCGATGCTGGC
GCATATCGACCATAGCGCGGTGGCAGCGTTTGGTGCGGGTACGCGCTTAGAATCGGTGCTGTTAATTGTGGTCATGGCAT
TATCATCGAGCCTGATGCCGTTTATTGCACAAAATCTCGGTGCTGGCCAACCCCAAAGGGCGAAGCAGGCTTTGCTGCTA
TCGCTTAAATTTATCTTAGTATTCCAAACCTTACTCTATATTCCGCTGGCATTTTTTGCCCAGCCACTCGCGAGTTTATT
CAGTACCGATCCGCAGGTGTTAGAGTGGTTAAGTTTTTATATTCTGGTTTTGCCCTGCGCCTATGGTCCGCTGGGGATAG
TGATTATTTTCGCCACTGCGCTAAATGCTTACCACAGACCGATGAGCTCATTAGTGATTAACCTGTGCCGCTTAGTGCTA
TTGATGCTGCCACTGGCTGCGCTTGGGTCTTATATCGATGGCGTGAAAGGCTTATTGCTCGCACTCCCCATCACTAACTT
GCTGATGGGGATTGCCTGTTATTATCTAGCCCAGCGGATTTGCGAGCCCGTAAAAGCCACAACCGCCGACACCCTTTAG

Upstream 100 bases:

>100_bases
TTTACAAAAAAAAATTCAAATTTTTGATGTCGGTTTTTTCAAGTGGGCACAATCCTGCTAGAATTCCGCCTCCGCTCGCA
AACAAGGCACTATTTTCTCC

Downstream 100 bases:

>100_bases
CATTTAGGTGACACTTTTAAAGCGAAAGCGCACATCATCGGCTGGATATGACTCCTCCGATGCTTTACAGACTCGGCGCA
CACCTAAGGCATTGAGGTTG

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>452_residues
MKDRHGLLSAPIGRVLLNMSLPNLIGIMTILGFSLADTFFISQLGTEALAAISFTFPVTLIISSIAIGVGAGVSTNLGRL
IGSGNAPQAKVFLHDALLLTFILIASLSALGSIFIEPLFSLLGANETSLPLIHDYMMYWYVGAPLLVLLMVGNQGLRSTG
DTRSPAMIMTLAAIINLILDPLLIFGIGPFPRLEIQGAAIATLFSWLVALSLSGYLLIIKHRMLERAAFDIDRMRANWSK
LAHIAQPAALMNLINPLANAVIMAMLAHIDHSAVAAFGAGTRLESVLLIVVMALSSSLMPFIAQNLGAGQPQRAKQALLL
SLKFILVFQTLLYIPLAFFAQPLASLFSTDPQVLEWLSFYILVLPCAYGPLGIVIIFATALNAYHRPMSSLVINLCRLVL
LMLPLAALGSYIDGVKGLLLALPITNLLMGIACYYLAQRICEPVKATTADTL

Sequences:
NA

Specific function: NA

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA