Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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Identifier: 24372234

GI number:

Start: 670490

End: 672637

Strand: Direct

Name: Not Available

Synonym: SO_0643

Alternate gene names: NA

Gene position: NA

Preceding gene: 24372231

Following gene: 24372235

Centisome position: NA

GC content: NA

Gene sequence:

>2148_bases
ATGAATAAAGCATGGTTCAGCCCTCAAGAGCTTCTGCAATTACCTGGCATGCCTACAACCGTTCAGGGTATCAGGTTTAA
AGCAAAGACAGAAAGCTGGGAGTCCAGAAAGAAAGAGGGTAGCAAAGGATTTGAATACCATCTTGGTAGCCTTCCACCTA
TCACTCAGGCGCATCTTCGTCAGCAAGCCGTAAAAAATACGACAAGCCGAGAAGTCGCAGCCGCACGCCAATTGATAGCA
ACGCCAGCAAGTCAGCTGGTTAAAAAAACGGAATTACAACAGCAATTTTTAACGCTGCCTAAAGCGAAACAACAAGTCGC
GATGGAGCGCCAGCTGCTACTCAATGATATGGCAAATTTCATCGCTCCCTTTGTTGAGGCTGGTCGCCGCACTGAAGGCG
TCATGGTATTTGCTAAACAGTGCAACCAATCAAAAGCCACTCTATATCGCTGGCAAAAAGCCTATGACGAAAAAGGATTA
ATGGGCCTGGTTGATACTCGGGGCGGTGCGCAAGTCAGCGTGATGGAAGATCAAAAAGACCTGCAACAATTCTTAATTGC
TTTAGTCACGGGCAAGCCGCATTTGCTCGAAAAATACAAAGTCCAGCAGCAAGAAGCACAAAAGAAAGCCGCAGAACATG
GCTGGATTGTCCCTTCAATTGGCTCAATCCGTCGTTGGATAAGTCGCTGGCATAGCGACAACATCGCCGCGTTTACCGCG
CTAACCAATCCCGATGCGTACAATAACTCGCACCGCCCACTCTACGGCACCATGTACCCATGGCTCAGTGGCCCTAATCA
AGTTTGGGAGTTCGACAGCACACCAACGGATGTCATGCTCAATGCTCACGGCAAACTGCGTCGCTATGCCGTTGTAGCCG
CGATTGATGTTTATACCCGCCGCCCCATGGTCTTAGTCACCCCAACCTCTAACGCCGAAGGCATCTGCCTATTACTGCGT
CGCTGCCTACTTAACTGGGGCATGCTGGAAGCCGATGGGGTTGCACGTACCGACAACGGTTCTGACTATGTCAGCCTAAG
AGTAAGTGGCATTTTCGATATCTTAGGTATCGACCAATCCCGCACCCGCCCATTTAGTGGATGGGAAAAGCCCTATATCG
AGCGTTTCTTCGGCACATTAAGCCGCGCCCTGTTTGAGTTGTTGCCTGCTTATATTGGCCATAACGTCAGTGATCGTCAG
CAAATCGAATCTGCCAAAGCCTTTGCCCAACGGATTGGCGGCAAAAACAAGGCCGCCAATAAAGAAGAAGCTTTATCAGT
GGCCATGACGCCAGAAGCACTGCAAAAGATGATCGATGACTGGATTCAATATGACTACATGCACCAGGTGCATGAAGGCT
TTAAAGGCGCGTTAAAAGGTAAAACGCCCTTTACAGTCATGAGCGAAAGCGCCTATGTCGCTAACCGTATCGCCAATCCC
CATGCCCTCGACTTATTACTTAACCATGTTGGTGATGCCACTGTGATTCGCGGTAGCGTGAGTGCAGGCAATATCCGCTA
TACGGCCCCCGAACTTCAAGAAAGTCTCTGGGACAGAAAACGGGTGCGCGTATTCCTCGATCCTTCCGATGTTGGCCGCG
CGACTCTATATGCCCTCGATAACTGGCAGCAATGCGTCGATGCAGTGAATTTAGATCTGATTGGCCGCGATATCGATCCA
GCAGCCTTTCGCAAAGCCCGCAATGAAGATAAGAAAGTACTCGCCAGCTTCCGCCGCGCAGCACGGGAGCTACAAGAAAA
ATTTGGCATCGATACCTTGGCAGCCGAAGGCTTGGCCAAAGCCGCAGCCGAACGTGGCAGCCTAACCAGTTTCACCCCTA
AACCGACTACCACCGATAACCCTGCACTGGCTGCACTTGCACAAGCCAGCAGCGATAGCGATCAGCAACTCGCCAGCTTA
AGCCACCAAGCTCAAGCCATTAGCGCGGCAGCCCAAAGGGTTAACCAAAATCACGCCACGGTCATGCGCACCGAACACGA
AAAAGCCGAAGAGTTAACTCTAGCAACGCTTGAGCGTGAGCTAAGTGAGCGTGAAAAGTTATGGCTAAAAGAATACCGCC
TCAAATACCGCATGTTTGCCGCAAGGCTCGACAGGCAATTAGAGGAGACGAAAAAAGCCGCCAAGTAG

Upstream 100 bases:

>100_bases
TTTGCACCCTGTAAACAGCGTAAACCAAAACGCGCTTTATCTCGCAAGATAATTGAAGAAATCAGCAAAACCATTGGCTG
CGACTTGTTGAGGGAAGAAC

Downstream 100 bases:

>100_bases
GATTGGCGGCTTTTGAAGGGACGAGGAGTCCTATTTAAAACTTTGTTTACCACCACGGAGTATAAATTATGAAACATAAA
ATTGTCGAAGTTAAAAATGT

Product: transposase, putative

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>715_residues
MNKAWFSPQELLQLPGMPTTVQGIRFKAKTESWESRKKEGSKGFEYHLGSLPPITQAHLRQQAVKNTTSREVAAARQLIA
TPASQLVKKTELQQQFLTLPKAKQQVAMERQLLLNDMANFIAPFVEAGRRTEGVMVFAKQCNQSKATLYRWQKAYDEKGL
MGLVDTRGGAQVSVMEDQKDLQQFLIALVTGKPHLLEKYKVQQQEAQKKAAEHGWIVPSIGSIRRWISRWHSDNIAAFTA
LTNPDAYNNSHRPLYGTMYPWLSGPNQVWEFDSTPTDVMLNAHGKLRRYAVVAAIDVYTRRPMVLVTPTSNAEGICLLLR
RCLLNWGMLEADGVARTDNGSDYVSLRVSGIFDILGIDQSRTRPFSGWEKPYIERFFGTLSRALFELLPAYIGHNVSDRQ
QIESAKAFAQRIGGKNKAANKEEALSVAMTPEALQKMIDDWIQYDYMHQVHEGFKGALKGKTPFTVMSESAYVANRIANP
HALDLLLNHVGDATVIRGSVSAGNIRYTAPELQESLWDRKRVRVFLDPSDVGRATLYALDNWQQCVDAVNLDLIGRDIDP
AAFRKARNEDKKVLASFRRAARELQEKFGIDTLAAEGLAKAAAERGSLTSFTPKPTTTDNPALAALAQASSDSDQQLASL
SHQAQAISAAAQRVNQNHATVMRTEHEKAEELTLATLERELSEREKLWLKEYRLKYRMFAARLDRQLEETKKAAK

Sequences:
NA

Specific function: NA

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA