Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

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The map label for this gene is selB

Identifier: 24371706

GI number:

Start: 115656

End: 117677

Strand: Direct

Name: selB

Synonym: SO_0106

Alternate gene names: NA

Gene position: NA

Preceding gene: 24371705

Following gene: 24371707

Centisome position: NA

GC content: NA

Gene sequence:

>2022_bases
ATGATTATGGTCACTGCGGGCCATGTCGACCACGGTAAGAGCACGCTCATCCGTGCCTTGACGGGCATGAACACCGACAG
GCTCCCCGAAGAAAAACGCCGTGGCATGACTATCGATCTCGGCTACGCTTTTATGCCACTGCGAGATGGCACTCGACTGG
CTTTTATCGATGTCCCCGGCCATGAAAAATTCATCAATAACATGCTGGTGGGCGTGAGTCATGTGCGCCACGCGCTGCTG
GTGTTGGCCTGTGACGACGGGGTGATGCCACAAACCCGCGAGCATCTGCAAATCCTCGCCCTCTTACCGCTCAATAGTTT
GACCTTAGTGCTGACCAAGCGGGATTTGGTCGATGACCAAACCGCCGCCAAGTTGGCTTCAGAGGGAATAACGCTGCTGG
CAGAATACGGTATTGAGGCCAGTGGCGTATTTGAGGTCTGCGCTAGTGATGCAGGTGATGCGGGGGTAGAAACCCTTAAA
CAACATATTTTGGATATTGCCGAGCAGCAATCGACCCAAGCGGAAGATGCCAGCAGTTTTAGGATGACGCTCGATCGCGC
CTTTAGCGTTAAAGGTGTGGGCTGTGTGGTTACTGGCACTGTGATTAGCGGCAGTGTGTGTGTTGGCGATAGCCTCTACA
GCTCAGGGCAAAAGGCGAAATTACGGGTGCGCGGCATTCACTGCCAAGGGATGGAAGTCCATAGAGCCTTAAGTGGCACT
CGGGTCGCTTTGAATCTTACCGGTGTTGATAACCACAGAGCACCTGCCCGCGGTGATTGGTTAAGCAGTCTGCCTCAGGC
TGATTTGTGCGCTAGACCTGTAGTACACATTCGCAGTTTTGAACCCTTAACCCATTGGCAAAATGTTCATTGTCACCACG
GCGCCGACCACACCTTAGGGCGAGTATCGCTTCTGGATGAGGCCGATGGGCAGGGGCGTTATCTGGCCGAAATTGTGCTC
GATAAACCGCTGCTGCTATGTCAGGACGACCCGATAGTGCTCAGGCATATTGGCGGCAAGCAAACGCTGGGCGCTGGGCG
GGTGCTGGCATTAAAAGTTTCCAATCGTAAAAAGCGTACGCCTGAGCGTGTCAGTAAGCTGCAACAGCTGGCTCAGCTCA
CCAATCCGGTGAATGTGCTGGCGCTACTCGGCCAGAGTGAGGCGCTCAGTATTGATGAAATCCGTTGGCGCTGGCAGCTA
ACCGATGAAGGGCTTGCCGCCATGTTAGCGCAGGCGGGGCTGACTCGGATTGGCGCCTACGGGCTATCGACTCAGTTGCT
TGAGCAAGAAAAACAGCAGTTTATCGATCTGTTACGTGAATATCACCAAGAGCATCCCGACCAATTAGGGCTGGGGCGCA
ATCGTCTGCAACGTATGAGTCATAGCGTATTGCCTAGCGAGCTTGCCAATAAGGTGCTCGATAGCCTCTGCCAAGAGGGG
CAGATGGCGCTGCGCGGTGCCTTGTTACAGCTGGCGGATCACAGGATTGTCCTCGATAGCGAGGCGCAGCAGTGCTGGCA
GCGTTTAGCCCCTTGGCTGGCGCAGCAAACGTCCCCTGTGTGGGTGACTGAGATGGGGGAATATCTGGATCTCGAGCCCG
CCAAACTTCGATTGCTGTGCTTTCAACTGGTGCAACAGGGCTTTATTACCGCGGTGGTGAAGGACAGGTATCTGCTGAGT
GAGCAGCTGTGCCACTACGCCAATCTAGTGCGAGAACATGTGGACACCCACGGTAAGCTCGAAACCGCAGAGTTTAAAGA
CATGATTGGCCTTGGCCGTAAGGTAAGCATTCAATTACTGGAGTTTTTTGACCGCAGCGGTTTTACCCGCAGGAAGTTTC
GCAGCAACAGTCGGGAAATTCGGGATGGGGAACTGTTTTATTCCCATGAGAATTGGCGGAAGAACATAGGAGTCGAACCT
ACCCAGGACTGCTGGCAGCCCTACCCGGATTTGAAATCCGGACGCCTCACCGGAGACGACGTTCTTCCAATAGAAGACAA
CTTGATAGTAGAAAATGTGTAA

Upstream 100 bases:

>100_bases
TGATTGGTCGAATGACCCAAGATCAACTTCGCCTCGACCTGCGCGGTATCGATGATGAGGCCGAATTATTGGCCGAACTC
AGCACCTTAGGTGTGCAGCT

Downstream 100 bases:

>100_bases
ACCTGAATCAAGTGCATTCGTATTTCGTTAGTCGCTTTGTGACTTAAGTCGTGTTTCATAAGTAAACCAATTGTTTTTAT
TTGAATTTATGAGTTTAGAG

Product: selenocysteine-specific translation elongation factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>673_residues
MIMVTAGHVDHGKSTLIRALTGMNTDRLPEEKRRGMTIDLGYAFMPLRDGTRLAFIDVPGHEKFINNMLVGVSHVRHALL
VLACDDGVMPQTREHLQILALLPLNSLTLVLTKRDLVDDQTAAKLASEGITLLAEYGIEASGVFEVCASDAGDAGVETLK
QHILDIAEQQSTQAEDASSFRMTLDRAFSVKGVGCVVTGTVISGSVCVGDSLYSSGQKAKLRVRGIHCQGMEVHRALSGT
RVALNLTGVDNHRAPARGDWLSSLPQADLCARPVVHIRSFEPLTHWQNVHCHHGADHTLGRVSLLDEADGQGRYLAEIVL
DKPLLLCQDDPIVLRHIGGKQTLGAGRVLALKVSNRKKRTPERVSKLQQLAQLTNPVNVLALLGQSEALSIDEIRWRWQL
TDEGLAAMLAQAGLTRIGAYGLSTQLLEQEKQQFIDLLREYHQEHPDQLGLGRNRLQRMSHSVLPSELANKVLDSLCQEG
QMALRGALLQLADHRIVLDSEAQQCWQRLAPWLAQQTSPVWVTEMGEYLDLEPAKLRLLCFQLVQQGFITAVVKDRYLLS
EQLCHYANLVREHVDTHGKLETAEFKDMIGLGRKVSIQLLEFFDRSGFTRRKFRSNSREIRDGELFYSHENWRKNIGVEP
TQDCWQPYPDLKSGRLTGDDVLPIEDNLIVENV

Sequences:
NA

Specific function: NA

COG id: COG3276

COG function: function code J; Selenocysteine-specific translation elongation factor

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA