Definition Shewanella oneidensis MR-1, complete genome.
Accession NC_004347
Length 4,969,803

Click here to switch to the map view.

The map label for this gene is trkH-1

Identifier: 24371624

GI number:

Start: 29096

End: 30556

Strand: Direct

Name: trkH-1

Synonym: SO_0024

Alternate gene names: NA

Gene position: NA

Preceding gene: 24371623

Following gene: 24371625

Centisome position: NA

GC content: NA

Gene sequence:

>1461_bases
ATGCAATACAAAACCATAATAAGAATCATAGGCCTGTTAATCGGCCTGTTCTCCATCACTATGCTGCCACCAGCCTTAAT
CGCCATTTGGTATAACGATGGCGGCGGAACTGCGTTTATTCAGGCCTTTTTTGTCAGCTTATTTATCGGTTTTTGGCTCT
GGTATCCTCATCGCCGCTGTAAGGAGGAATTACGTACCCGTGAGGGATTTCTCATCGTCGTGCTGTTTTGGACTGTGCTG
GGTTCTATCGGGGCTTTACCTTTTATCTTCTCTAGTCAACCGGATCTCAGTTGGACGGACAGTTTTTTTGAATCTTTTTC
CGCGCTAACCACCACTGGGGCTACAGTCATTGTGGGGCTGGACTCCTTACCTAAAGCGATTTTATTTTATCGACATTTGC
TGCAATGGCTTGGCGGTATGGGGATCATCGTACTGGCTGTCGCGATTTTACCTGTACTGGGCATTGGCGGGATGCAGCTC
TATCGCGCTGAAATCCCTGGGCCAGTAAAAGACAGTAAGATGACGCCTAGGATTGCCGAGACGGCCAAGGCGTTATGGTA
CATCTATCTATTGCTGACTATCAGCTGTGCTGGTGCCTATTGGTTGGCGGGGATGAGCATGTTCGATGCCATTTGTCACT
CGTTTTCGACCATCGCCATCGGCGGTTTTTCAACCCATGATGCCAGTATGGGCTACTTTAACAGCCCTGTAATTAACCTG
ATTTGTGTGTTCTTTTTAATTGTCTCTGCAGTGAATTTTAGCGTGCATTTTGCGGCATTTTCGTGGAGAGGTATTAACTT
GAAGGTCTATTTTAGAGATACCGAATTTAAAGTGTTAGTCGCAATTCAATTGCTCTTAACCGCGATTTGTTTTTTTACCT
TGTATTTCTATTCTGATATTTATGACACGCCGGAAGAAACCTTAAATCATGCCTTATTCCAAGCGGTTTCGATAGCAACC
ACCACAGGGTTTGGCACAGACAGTTTCAATATGTGGCCATTATTTTTGCCAATGTTATTAATGTTTTCGAGCTTCATTGG
TGGTTGTGGTGGCTCGACCGCGGGGGGGATTAAGGTTATTCGGGTCATTCTCTTGTTGTTGCAGGGGTCTCGCGAGCTAA
AACGTCTTGTTCATCCCAAGGCGATGTTTTCGATTCGAATAGGCTCAAAGGCGCTGCCTGACCGTATTGTCGATGCCGTG
TGGGGCTTTTTTTCGGCCTATGCTTTAGTTTTCGTGCTGTGTATGTTGGCGCTAATGGCAATGGGGCTCGATGACATCAC
TTCCTTTAGTGCTACGGCCGCTTGCTTAAATAACCTCGGCCCAGGTTTAGGTGAGGTTGCGAGTAATTATGCCAGTATTG
GTGATGGCGCCAAATGGGTGCTGGTGGTAGCTATGCTATTTGGTCGCCTTGAAATCTTTACCTTGTTGATTTTGTTCACG
CCAACTTTCTGGAAAGATTAA

Upstream 100 bases:

>100_bases
TGCGGGCAGACTTTAAACTGTGATGCTTGCGTAAATTGTGCCAAAATATACAAAATGCTGAAAATACCTTTGCAGCCAAT
GGAATAATTGAACACGCGTA

Downstream 100 bases:

>100_bases
TATGCAAACATTAATAATCTACTCAACCATCGACGGTCAAACGCTAGAAATTTGTCGTAAGATTAAAGCATTTGCTGAGC
GGGCGGGTGAAAAGGTCTCC

Product: potassium uptake protein TrkH

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>486_residues
MQYKTIIRIIGLLIGLFSITMLPPALIAIWYNDGGGTAFIQAFFVSLFIGFWLWYPHRRCKEELRTREGFLIVVLFWTVL
GSIGALPFIFSSQPDLSWTDSFFESFSALTTTGATVIVGLDSLPKAILFYRHLLQWLGGMGIIVLAVAILPVLGIGGMQL
YRAEIPGPVKDSKMTPRIAETAKALWYIYLLLTISCAGAYWLAGMSMFDAICHSFSTIAIGGFSTHDASMGYFNSPVINL
ICVFFLIVSAVNFSVHFAAFSWRGINLKVYFRDTEFKVLVAIQLLLTAICFFTLYFYSDIYDTPEETLNHALFQAVSIAT
TTGFGTDSFNMWPLFLPMLLMFSSFIGGCGGSTAGGIKVIRVILLLLQGSRELKRLVHPKAMFSIRIGSKALPDRIVDAV
WGFFSAYALVFVLCMLALMAMGLDDITSFSATAACLNNLGPGLGEVASNYASIGDGAKWVLVVAMLFGRLEIFTLLILFT
PTFWKD

Sequences:
NA

Specific function: NA

COG id: COG0168

COG function: function code P; Trk-type K+ transport systems, membrane components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA