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The map label for this gene is rnfC [C]

Identifier: 239618520

GI number: 239618520

Start: 2292768

End: 2292998

Strand: Reverse

Name: rnfC [C]

Synonym: Kole_2161

Alternate gene names: 239618520

Gene position: 2292998-2292768 (Counterclockwise)

Preceding gene: 239618521

Following gene: 239618519

Centisome position: 99.6

GC content: 40.69

Gene sequence:

>231_bases
ATGATGATGAATTACGTTGTTATCGATGAAGAACGCTGCAAGGGCTGTGGACTGTGTATAAATGCCTGTCCTAAGAAGGT
ATTGAGTTTTTCTAAGAAATTCAATAGCAAAGGTTATCACCCAGCCCAACAGCATGATCCGGACAACTGTATAGGTTGTG
GCTTCTGTTATATGATGTGTCCTGACACTGCTATAACCGTCTATCGTGAAACAGCTGAGGTTTCAAAATAA

Upstream 100 bases:

>100_bases
GTGGCAATGACTATCGTTATTGACGGATTAAAGGAAGAAAAATTACAATTCCCGGTTTTTAATTTGAAAAAACATCTGAA
AACCCCATGGGAGGTATGAG

Downstream 100 bases:

>100_bases
GGGAGGAGTTGCGATGGAAGAAAAAGTGATGGTTAAAGGCAACGAAGCTATGGGGGAAGCGGCAGTAAGGGCAGGATGTA
GACTTTATTTCGGTTATCCC

Product: 4Fe-4S ferredoxin iron-sulfur binding domain protein

Products: NA

Alternate protein names: Ferredoxin; 2-Oxoglutarate Ferredoxin Oxidoreductase Subunit Delta; Keto/Oxoacid Ferredoxin Oxidoreductase Subunit Delta; Ferredoxin 4Fe-4S; 2-Oxoisovalerate Oxidoreductase Gamma Subunit; 2-Oxoisovalerate Ferredoxin Oxidoreductase Delta Subunit; 2-Oxoglutarate Synthase Delta Subunit; Ketoisovalerate Oxidoreductase Subunit VorC; Keto/Oxoacid Ferredoxin Oxidoreductase Subunit; 2-OxoacidFerredoxin Oxidoreductase Ferredoxin Subunit; 2-OxoacidAcceptor Oxidoreductase Delta Subunit; 4Fe-4S Ferredoxin; 2-Ketovalerate Ferredoxin Oxidoreductase Subunit; 2-Ketoglutarate Ferredoxin Oxidoreductase Subunit Delta; Photosystem I Iron-Sulfur Protein PsaC; 2-Oxoacid Oxidoreductase Subunit Delta; 3-Methyl-2-Oxobutanoate Dehydrogenase Delta Subunit

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MMMNYVVIDEERCKGCGLCINACPKKVLSFSKKFNSKGYHPAQQHDPDNCIGCGFCYMMCPDTAITVYRETAEVSK

Sequences:

>Translated_76_residues
MMMNYVVIDEERCKGCGLCINACPKKVLSFSKKFNSKGYHPAQQHDPDNCIGCGFCYMMCPDTAITVYRETAEVSK
>Mature_76_residues
MMMNYVVIDEERCKGCGLCINACPKKVLSFSKKFNSKGYHPAQQHDPDNCIGCGFCYMMCPDTAITVYRETAEVSK

Specific function: May Be Part Of A Membrane Complex Involved In Electron Transport (By Similarity). [C]

COG id: COG1146

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Inner membrane-associated (By similarity) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8551; Mature: 8551

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.5 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
17.1 %Cys+Met (Translated Protein)
10.5 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
17.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMNYVVIDEERCKGCGLCINACPKKVLSFSKKFNSKGYHPAQQHDPDNCIGCGFCYMMC
CCCEEEEEECCCCCCCCEEHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHEEEC
PDTAITVYRETAEVSK
CCCEEEEEECCCCCCC
>Mature Secondary Structure
MMMNYVVIDEERCKGCGLCINACPKKVLSFSKKFNSKGYHPAQQHDPDNCIGCGFCYMMC
CCCEEEEEECCCCCCCCEEHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHEEEC
PDTAITVYRETAEVSK
CCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 4Fe-4S clusters [C]

Metal ions: Iron-Sulfur [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA