Click here to switch to the map view.

The map label for this gene is yqeB [H]

Identifier: 239618437

GI number: 239618437

Start: 2204950

End: 2205717

Strand: Direct

Name: yqeB [H]

Synonym: Kole_2078

Alternate gene names: 239618437

Gene position: 2204950-2205717 (Clockwise)

Preceding gene: 239618436

Following gene: 239618438

Centisome position: 95.78

GC content: 41.93

Gene sequence:

>768_bases
TTGAAAGACCCGAGAAAGCTATGGGAGATACTCATAGGTCTCGATGAACCTTTTGTTATCGCGACTGTTTGTAATACAAA
AACCTCCAGCGAAAGAATGGAAGGAGAGGTTTTTGGAATGACTTATGCCGGGAAATTTTATGGAGAAGCTGAAGGAGAAT
TCAGGAGATTTCTCGAAGCCAATATGACAAAAGCGATGAAGACGTCTATGAGTTTTATGGAAACATACATAGAGCATAGA
AGTGTCGCGGCCCTATGGGGGGCAACCTGTGGTGAACGTACATCGGTTTTTTTTCATTACGTTGGCCCGTCACCGAAGGT
ATACATCTTTGGTGCCGGAAAGTTATCAGAAAGGGTTGCAAAAATACTTGTAGCTGCTGATTTTGATGTGGTGGTAATGG
ATGACAATGAGAACTTCCTGAGAAATTTTGATAAAATCTGTAGTTACAGAAAAATCAATTACGACGAGCCCGGGAGCTTT
CCGACAATAGAAGCGAGGGATTTCTGTGTTGTGTTGACCAGAGGGCACACCAAAGATTTCGAGGCTTTGCAGATATGTCT
CGCTTCAAAAGCAAGATACATTGGACTGATTGGTTCAAATAAGAAAAATTCTGAACTTAAAGAGAGGATGTTTAGAGCAG
GCTATACAGAGGAAGCGTGGGAACGCGTAAAGACACCGATAGGGATAGAGATAGGTGCTCAAACACCTGGCGAAATAGCA
ATAGCCATTGCCGCTGAAATAGTAAAGGTAAAAAACGAAAAACAATAA

Upstream 100 bases:

>100_bases
ATTAATGATAACAAGTCAGCTTTTATACCGCTCGGAGGGCAGAAAAGGCATTGTTTTGACATAGATACTGAAAATGATTT
TAAGGAGGCGTTGAAAACCA

Downstream 100 bases:

>100_bases
TTATAGAGACCGGGGGTGTTTATGTGGCTTTTAAGGTAATACTGCCGGAAACAGAAGACGAACTTATGATGGCTCTCATG
GAAGATAATGTAAAAATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MKDPRKLWEILIGLDEPFVIATVCNTKTSSERMEGEVFGMTYAGKFYGEAEGEFRRFLEANMTKAMKTSMSFMETYIEHR
SVAALWGATCGERTSVFFHYVGPSPKVYIFGAGKLSERVAKILVAADFDVVVMDDNENFLRNFDKICSYRKINYDEPGSF
PTIEARDFCVVLTRGHTKDFEALQICLASKARYIGLIGSNKKNSELKERMFRAGYTEEAWERVKTPIGIEIGAQTPGEIA
IAIAAEIVKVKNEKQ

Sequences:

>Translated_255_residues
MKDPRKLWEILIGLDEPFVIATVCNTKTSSERMEGEVFGMTYAGKFYGEAEGEFRRFLEANMTKAMKTSMSFMETYIEHR
SVAALWGATCGERTSVFFHYVGPSPKVYIFGAGKLSERVAKILVAADFDVVVMDDNENFLRNFDKICSYRKINYDEPGSF
PTIEARDFCVVLTRGHTKDFEALQICLASKARYIGLIGSNKKNSELKERMFRAGYTEEAWERVKTPIGIEIGAQTPGEIA
IAIAAEIVKVKNEKQ
>Mature_255_residues
MKDPRKLWEILIGLDEPFVIATVCNTKTSSERMEGEVFGMTYAGKFYGEAEGEFRRFLEANMTKAMKTSMSFMETYIEHR
SVAALWGATCGERTSVFFHYVGPSPKVYIFGAGKLSERVAKILVAADFDVVVMDDNENFLRNFDKICSYRKINYDEPGSF
PTIEARDFCVVLTRGHTKDFEALQICLASKARYIGLIGSNKKNSELKERMFRAGYTEEAWERVKTPIGIEIGAQTPGEIA
IAIAAEIVKVKNEKQ

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789240, Length=241, Percent_Identity=26.9709543568465, Blast_Score=84, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR017695
- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 28784; Mature: 28784

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDPRKLWEILIGLDEPFVIATVCNTKTSSERMEGEVFGMTYAGKFYGEAEGEFRRFLEA
CCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCCCCCHHHHHHHHH
NMTKAMKTSMSFMETYIEHRSVAALWGATCGERTSVFFHYVGPSPKVYIFGAGKLSERVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHH
KILVAADFDVVVMDDNENFLRNFDKICSYRKINYDEPGSFPTIEARDFCVVLTRGHTKDF
HHHEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEECCCCCHH
EALQICLASKARYIGLIGSNKKNSELKERMFRAGYTEEAWERVKTPIGIEIGAQTPGEIA
HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCCCEE
IAIAAEIVKVKNEKQ
HHHHHHHHHHCCCCC
>Mature Secondary Structure
MKDPRKLWEILIGLDEPFVIATVCNTKTSSERMEGEVFGMTYAGKFYGEAEGEFRRFLEA
CCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHCCEEEEEEECCCCCCCCCHHHHHHHHH
NMTKAMKTSMSFMETYIEHRSVAALWGATCGERTSVFFHYVGPSPKVYIFGAGKLSERVA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHH
KILVAADFDVVVMDDNENFLRNFDKICSYRKINYDEPGSFPTIEARDFCVVLTRGHTKDF
HHHEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCEEEEEECCCCCHH
EALQICLASKARYIGLIGSNKKNSELKERMFRAGYTEEAWERVKTPIGIEIGAQTPGEIA
HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCCCEE
IAIAAEIVKVKNEKQ
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]