| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is 239618326
Identifier: 239618326
GI number: 239618326
Start: 2079786
End: 2080688
Strand: Reverse
Name: 239618326
Synonym: Kole_1963
Alternate gene names: NA
Gene position: 2080688-2079786 (Counterclockwise)
Preceding gene: 239618327
Following gene: 239618325
Centisome position: 90.38
GC content: 33.22
Gene sequence:
>903_bases ATGAGATTTTCAGAAAGAATGGGATATAAAAAACCAAAAACAGAAATTCAATACGAATCAATGGATGACGATCTTAGAAA CAGAATATGGAGTTTACTTTACTCATTTTATTGGGGAATTATGGAAGAGCCAGAGAAAAGAAGTTATTTAATAAAAGAAA AATTGCGAGGATATGAAAATGAATATGCTTTATTTATCCTCTTCAGGAAAATGTGGTTCTATTTCCTAAAAAAACCGATA GATGAAATGCCGACCTATTGGCCAAAACTATACAGCGAAATTAGGAAAATATATTTCAGTTTTCCCTGGTACGAAGTATA TGATTTCATAGAATTTATAGTAGATAATTTTGGCGACAAAGGTCCCAAAGGAAAACAAAACGAAGGATTTATCGACTTAT GCAATGAGGTATTGAAAGAAGAATTATCCGCATATCGCTTTGTAGATGGAGTTATTACCCCGATAACTAACGAAATAGAA ATTTCTGAGATTGAACACGCTTTAGAATCAACCAGCCACTTGGAAGGCGTAAATACTCATTTAAAAAGTGCCCTTAAATT GTTTTCAGACAAAAAGAATCCCGATTACAGAAATTCTATAAAGGAGTCTATAAGTGCTATTGAAGCTCTTTGTCGTTTGA TATCTAAAGATGACAAAGCTACTTTAGGAAAGGCATTAAAAATCATAGAAGAAAGTGGCAAATGCAAGATTCATGGCTCA TTAAAAGCTGGATTCGAAAAGATATACGGTTATACAAGCGATGAACATGGGATAAGGCATTCTTTGCTTGATAAAGATTC AGAGCTCGATCAAGAAGATGCAAGATTTATGCTCGTTTCCTGTTCAGCATTTGTTAATTACCTGATAGTCAAAGCAAATA AGGGTGGAATCACTATTAATTAA
Upstream 100 bases:
>100_bases TTTGTATTCTTGTCGTCGTCGTTACTGGCAAGATGCGATCGATCATTAAATACCAAAATTGAAGTGACGCACACCTCAAA TAAAAACAGGGGGGATTTCA
Downstream 100 bases:
>100_bases CTAGGTAATATGTGTGCCAGCTCTTGTGAAAAATTTTAACTTGACAAATATAGCCGCGTGGCTATATACTAGGTGAGAAA GGGTGAGGGGGCTGAAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MRFSERMGYKKPKTEIQYESMDDDLRNRIWSLLYSFYWGIMEEPEKRSYLIKEKLRGYENEYALFILFRKMWFYFLKKPI DEMPTYWPKLYSEIRKIYFSFPWYEVYDFIEFIVDNFGDKGPKGKQNEGFIDLCNEVLKEELSAYRFVDGVITPITNEIE ISEIEHALESTSHLEGVNTHLKSALKLFSDKKNPDYRNSIKESISAIEALCRLISKDDKATLGKALKIIEESGKCKIHGS LKAGFEKIYGYTSDEHGIRHSLLDKDSELDQEDARFMLVSCSAFVNYLIVKANKGGITIN
Sequences:
>Translated_300_residues MRFSERMGYKKPKTEIQYESMDDDLRNRIWSLLYSFYWGIMEEPEKRSYLIKEKLRGYENEYALFILFRKMWFYFLKKPI DEMPTYWPKLYSEIRKIYFSFPWYEVYDFIEFIVDNFGDKGPKGKQNEGFIDLCNEVLKEELSAYRFVDGVITPITNEIE ISEIEHALESTSHLEGVNTHLKSALKLFSDKKNPDYRNSIKESISAIEALCRLISKDDKATLGKALKIIEESGKCKIHGS LKAGFEKIYGYTSDEHGIRHSLLDKDSELDQEDARFMLVSCSAFVNYLIVKANKGGITIN >Mature_300_residues MRFSERMGYKKPKTEIQYESMDDDLRNRIWSLLYSFYWGIMEEPEKRSYLIKEKLRGYENEYALFILFRKMWFYFLKKPI DEMPTYWPKLYSEIRKIYFSFPWYEVYDFIEFIVDNFGDKGPKGKQNEGFIDLCNEVLKEELSAYRFVDGVITPITNEIE ISEIEHALESTSHLEGVNTHLKSALKLFSDKKNPDYRNSIKESISAIEALCRLISKDDKATLGKALKIIEESGKCKIHGS LKAGFEKIYGYTSDEHGIRHSLLDKDSELDQEDARFMLVSCSAFVNYLIVKANKGGITIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35187; Mature: 35187
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSERMGYKKPKTEIQYESMDDDLRNRIWSLLYSFYWGIMEEPEKRSYLIKEKLRGYEN CCCHHHCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC EYALFILFRKMWFYFLKKPIDEMPTYWPKLYSEIRKIYFSFPWYEVYDFIEFIVDNFGDK CHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC GPKGKQNEGFIDLCNEVLKEELSAYRFVDGVITPITNEIEISEIEHALESTSHLEGVNTH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LKSALKLFSDKKNPDYRNSIKESISAIEALCRLISKDDKATLGKALKIIEESGKCKIHGS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECH LKAGFEKIYGYTSDEHGIRHSLLDKDSELDQEDARFMLVSCSAFVNYLIVKANKGGITIN HHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEC >Mature Secondary Structure MRFSERMGYKKPKTEIQYESMDDDLRNRIWSLLYSFYWGIMEEPEKRSYLIKEKLRGYEN CCCHHHCCCCCCCCCEEHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC EYALFILFRKMWFYFLKKPIDEMPTYWPKLYSEIRKIYFSFPWYEVYDFIEFIVDNFGDK CHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC GPKGKQNEGFIDLCNEVLKEELSAYRFVDGVITPITNEIEISEIEHALESTSHLEGVNTH CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH LKSALKLFSDKKNPDYRNSIKESISAIEALCRLISKDDKATLGKALKIIEESGKCKIHGS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEEECH LKAGFEKIYGYTSDEHGIRHSLLDKDSELDQEDARFMLVSCSAFVNYLIVKANKGGITIN HHHHHHHHCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA