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The map label for this gene is ylbK [H]

Identifier: 239618323

GI number: 239618323

Start: 2077858

End: 2078649

Strand: Reverse

Name: ylbK [H]

Synonym: Kole_1960

Alternate gene names: 239618323

Gene position: 2078649-2077858 (Counterclockwise)

Preceding gene: 239618324

Following gene: 239618322

Centisome position: 90.29

GC content: 47.73

Gene sequence:

>792_bases
ATGAATGGTTTGGCTTTAGCTGCTGGAGGGGTAAAGGGGTTTGCACACGTAGCTGTATTAAGACTGCTTCAGGAGAACGA
CTTCAAGATCGATGTTGTTACCGGGTCATCCGCCGGGGCAATTGTCGCGGCATTATATGCGCTCTATGAGGACTGGGAAA
AGGTGCTAAAGGAATTTTCCAGCGCCGTAGATGAGCAATTGCCCGCGATGAAGAAATACTTAAAGAAGATAGAAGGTCCA
AACATATGGAGCATAATACATAGGTCCCTTGTTACCCTTGAAGATTACTACCCTTTCTTCAGAGCTTTATTCGGTAAGAA
GACCTTTTCAGACTGTAAAATCCCGCTCGGGGTGGTGGCTTTTGATGCCGTATCGCTCGAATCTATGCTGGTAACGGAGG
GATATCTTGTTGAAGCGGTTATGGCAAGTTCTTCCGTTCCGGGTGTTTTTTCTCCGGTATGGCTGGGAGGAACCCAGACT
GTTGATGGTGGTGTGTTGAGGCCGGTGCCGGTAGATGAGGCCCGATCGCTCGGTGCAGACTATGTTGTAGCCAGCAATTT
TGAGAAAGAGGAGCCGAAGGAACCTCAGGACCAGATGGAACTGCTTCTGTTTCTGGATAGCTGGAAAGAGAAATACATAA
AATCAAAGGAGCTTGAAAATGCCGATCTTGTGTTCAGCCACAGGGTGAATTACCCGTGGCACGCCTTTGAAAATTACAGA
GAAATCTACAAAGAAGCGTGGCAGGCACTTTGCAAAAGGAGGAAGGCAAATGAGATTAGCTTTCGGCGGTGA

Upstream 100 bases:

>100_bases
CCCATGTGAACCATAGAAAATTGACCCGCCCCTACTATTATCATCAAACGTCTTAGGACAAAAAAGGGCAAAAATGGTAA
AGTTGACAAGAGGTGATTGG

Downstream 100 bases:

>100_bases
TTCGATTCTTTACCTTTCTTTACCTGGAGCAATAAAAGCATTGAATGAAAGCACGATTGATATAGATGAAATTCACTGCG
TAGGATTTTCCTGTATCCCT

Product: Patatin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNGLALAAGGVKGFAHVAVLRLLQENDFKIDVVTGSSAGAIVAALYALYEDWEKVLKEFSSAVDEQLPAMKKYLKKIEGP
NIWSIIHRSLVTLEDYYPFFRALFGKKTFSDCKIPLGVVAFDAVSLESMLVTEGYLVEAVMASSSVPGVFSPVWLGGTQT
VDGGVLRPVPVDEARSLGADYVVASNFEKEEPKEPQDQMELLLFLDSWKEKYIKSKELENADLVFSHRVNYPWHAFENYR
EIYKEAWQALCKRRKANEISFRR

Sequences:

>Translated_263_residues
MNGLALAAGGVKGFAHVAVLRLLQENDFKIDVVTGSSAGAIVAALYALYEDWEKVLKEFSSAVDEQLPAMKKYLKKIEGP
NIWSIIHRSLVTLEDYYPFFRALFGKKTFSDCKIPLGVVAFDAVSLESMLVTEGYLVEAVMASSSVPGVFSPVWLGGTQT
VDGGVLRPVPVDEARSLGADYVVASNFEKEEPKEPQDQMELLLFLDSWKEKYIKSKELENADLVFSHRVNYPWHAFENYR
EIYKEAWQALCKRRKANEISFRR
>Mature_263_residues
MNGLALAAGGVKGFAHVAVLRLLQENDFKIDVVTGSSAGAIVAALYALYEDWEKVLKEFSSAVDEQLPAMKKYLKKIEGP
NIWSIIHRSLVTLEDYYPFFRALFGKKTFSDCKIPLGVVAFDAVSLESMLVTEGYLVEAVMASSSVPGVFSPVWLGGTQT
VDGGVLRPVPVDEARSLGADYVVASNFEKEEPKEPQDQMELLLFLDSWKEKYIKSKELENADLVFSHRVNYPWHAFENYR
EIYKEAWQALCKRRKANEISFRR

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656041, Length=213, Percent_Identity=26.7605633802817, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI116256487, Length=213, Percent_Identity=26.7605633802817, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI260656039, Length=213, Percent_Identity=26.7605633802817, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI260656037, Length=213, Percent_Identity=26.7605633802817, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI260656043, Length=213, Percent_Identity=26.7605633802817, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI226510936, Length=238, Percent_Identity=27.7310924369748, Blast_Score=94, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6323581, Length=203, Percent_Identity=25.1231527093596, Blast_Score=67, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29614; Mature: 29614

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGLALAAGGVKGFAHVAVLRLLQENDFKIDVVTGSSAGAIVAALYALYEDWEKVLKEFS
CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SAVDEQLPAMKKYLKKIEGPNIWSIIHRSLVTLEDYYPFFRALFGKKTFSDCKIPLGVVA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
FDAVSLESMLVTEGYLVEAVMASSSVPGVFSPVWLGGTQTVDGGVLRPVPVDEARSLGAD
HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHCCCC
YVVASNFEKEEPKEPQDQMELLLFLDSWKEKYIKSKELENADLVFSHRVNYPWHAFENYR
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
EIYKEAWQALCKRRKANEISFRR
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNGLALAAGGVKGFAHVAVLRLLQENDFKIDVVTGSSAGAIVAALYALYEDWEKVLKEFS
CCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
SAVDEQLPAMKKYLKKIEGPNIWSIIHRSLVTLEDYYPFFRALFGKKTFSDCKIPLGVVA
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
FDAVSLESMLVTEGYLVEAVMASSSVPGVFSPVWLGGTQTVDGGVLRPVPVDEARSLGAD
HHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHCCCC
YVVASNFEKEEPKEPQDQMELLLFLDSWKEKYIKSKELENADLVFSHRVNYPWHAFENYR
EEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHH
EIYKEAWQALCKRRKANEISFRR
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]