| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is yfcA [C]
Identifier: 239618319
GI number: 239618319
Start: 2073777
End: 2074511
Strand: Reverse
Name: yfcA [C]
Synonym: Kole_1956
Alternate gene names: 239618319
Gene position: 2074511-2073777 (Counterclockwise)
Preceding gene: 239618322
Following gene: 239618318
Centisome position: 90.11
GC content: 41.77
Gene sequence:
>735_bases TTGCAGGTGGTTTTTTACATTTCGACATATTTCGTTGGTCTCCTCGCGGGAATAATGAATACCCTCGCAGGCGGAGGCTC GATGCTTACACTTCCAATGCTGATGTTCCTTGGACTCGACGCAAACATCGCAAACGCCACAAACAGAATAGCCATATTCT TTCAAAATCTTGTTGCAGTTACAAGCTTCGAGAAAAAAGGAGTAAAAGCTTTCAGAATTTCCTTGCCCCTCGGGACAGTG GCGGCAGCAGGTGCAATTCTGGGATCCTTTATCGCTCTTGATTTAGACAAAAATCTATTGCAAAAAGTAATTGGCATCAC ACTGTTGATCATGACCTATTTTGTAATAAGAAAACCCAAACTCAAAAAGAGTAACTCTTCAACAAACTCTATCCTCAGGG TATTGGTGTTCTTCGGACTTGGTATATACGGCGGATTCATTCAAGCAGGGATTGGCTTTCTGATGATCGCTGCGATAACC TTCTTTATAGGGACAAACCTTGTGAGAACTAATGCAATCAAGGTGGGGATTATCCTCATTTACACCACAACTTCGCTGGT TGTCTTTCTGTCAAAAGGTATGGTGAATGTACCGGTCGGATTGTTGCTTGCACTGGGAAATATGAGTGGTGCCTATCTCG CCGTAAGGTTTGCCATAAAAAAGGGAGAGAAATTTTTAAGGATTGTTCTTATCGTTGTCGTAATCATAAATGCTGTAAAA GCTTTTATGCTCTAA
Upstream 100 bases:
>100_bases ACACGTGTACAAGTTGTACAAAAAGTTATCCAACAAAATGGTATGATGCTCATATACCTACCTTGTAATCCAGAAGATTA GGTCTCAGGAGTGATTTCCC
Downstream 100 bases:
>100_bases AAGCTCAATAACTCTGAATCAAAACGGATTTTCATGATAAAATAGTTAAAAGGGCTAAAGAGGTGGAAAATATGCCCTTA CTATATAATGGTGAAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF9 [H]
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MQVVFYISTYFVGLLAGIMNTLAGGGSMLTLPMLMFLGLDANIANATNRIAIFFQNLVAVTSFEKKGVKAFRISLPLGTV AAAGAILGSFIALDLDKNLLQKVIGITLLIMTYFVIRKPKLKKSNSSTNSILRVLVFFGLGIYGGFIQAGIGFLMIAAIT FFIGTNLVRTNAIKVGIILIYTTTSLVVFLSKGMVNVPVGLLLALGNMSGAYLAVRFAIKKGEKFLRIVLIVVVIINAVK AFML
Sequences:
>Translated_244_residues MQVVFYISTYFVGLLAGIMNTLAGGGSMLTLPMLMFLGLDANIANATNRIAIFFQNLVAVTSFEKKGVKAFRISLPLGTV AAAGAILGSFIALDLDKNLLQKVIGITLLIMTYFVIRKPKLKKSNSSTNSILRVLVFFGLGIYGGFIQAGIGFLMIAAIT FFIGTNLVRTNAIKVGIILIYTTTSLVVFLSKGMVNVPVGLLLALGNMSGAYLAVRFAIKKGEKFLRIVLIVVVIINAVK AFML >Mature_244_residues MQVVFYISTYFVGLLAGIMNTLAGGGSMLTLPMLMFLGLDANIANATNRIAIFFQNLVAVTSFEKKGVKAFRISLPLGTV AAAGAILGSFIALDLDKNLLQKVIGITLLIMTYFVIRKPKLKKSNSSTNSILRVLVFFGLGIYGGFIQAGIGFLMIAAIT FFIGTNLVRTNAIKVGIILIYTTTSLVVFLSKGMVNVPVGLLLALGNMSGAYLAVRFAIKKGEKFLRIVLIVVVIINAVK AFML
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0721 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002781 [H]
Pfam domain/function: PF01925 DUF81 [H]
EC number: NA
Molecular weight: Translated: 26183; Mature: 26183
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVVFYISTYFVGLLAGIMNTLAGGGSMLTLPMLMFLGLDANIANATNRIAIFFQNLVAV CEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TSFEKKGVKAFRISLPLGTVAAAGAILGSFIALDLDKNLLQKVIGITLLIMTYFVIRKPK HHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC LKKSNSSTNSILRVLVFFGLGIYGGFIQAGIGFLMIAAITFFIGTNLVRTNAIKVGIILI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEE YTTTSLVVFLSKGMVNVPVGLLLALGNMSGAYLAVRFAIKKGEKFLRIVLIVVVIINAVK EHHHHHHHHHHCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFML HHCC >Mature Secondary Structure MQVVFYISTYFVGLLAGIMNTLAGGGSMLTLPMLMFLGLDANIANATNRIAIFFQNLVAV CEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH TSFEKKGVKAFRISLPLGTVAAAGAILGSFIALDLDKNLLQKVIGITLLIMTYFVIRKPK HHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCC LKKSNSSTNSILRVLVFFGLGIYGGFIQAGIGFLMIAAITFFIGTNLVRTNAIKVGIILI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCEEEEEEEE YTTTSLVVFLSKGMVNVPVGLLLALGNMSGAYLAVRFAIKKGEKFLRIVLIVVVIINAVK EHHHHHHHHHHCCCHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFML HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1655697 [H]