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The map label for this gene is glgA

Identifier: 239618285

GI number: 239618285

Start: 2043488

End: 2044915

Strand: Reverse

Name: glgA

Synonym: Kole_1922

Alternate gene names: 239618285

Gene position: 2044915-2043488 (Counterclockwise)

Preceding gene: 239618286

Following gene: 239618284

Centisome position: 88.83

GC content: 42.44

Gene sequence:

>1428_bases
GTGAAAATCCTGTTCGTTTCATACGAGGTCTATCCTTTAGCTAAAGTTGGCGGACTTGCTGATGTTGCAGGCTCATTGCC
TAAGTATCTGGAAAAAGAAGGTGTAAGTGTACAGATAGCTATGCCCTTCCACAAAAAAGTGAAAGCTGACAATATAGAAA
ACACAGGAATTGTAATAACTACAAAACACCTGCCGGAGAAATACAGTTTTGAAATTTACAAAACCCCTCTTCCTGGAAGC
GGCGTTCCTGTTTTCCTTTTCAAAAACGACCAGCTTATAGATTCCGACGAAGTTTATGAAGGAACAGATCTGGCACTTCA
AGCCATCGCTTTCTCCGATGCTGTGGTGAAATTCGCTGAAACCCTGGAACCTGACCTGTTGCATGTTAACGACTGGCAAC
CGGCTTTAATTCCAGCTTACATCTCTGCATTTTACAACGGAAAACCAAAAACGCTGCTAACCATCCACAATCTTGGTTAT
CAGGGAGAATTCGATAAAAGTTATTTCTACAAAACCGGCTTGCCGGAAAAACTCTGGCAAGAAGGGAAAGCTGTAAAAAA
CGGTGCTTTTAATTTTCTGAAAACCGGAATCGTTACCGCAACCGCTATCAGTACAGTTAGTCCAACTTATGCGAAAGAAA
TTCAAACTCCGGAATATGGTGCTGGATTGGACGAAACCTTGAGAGCCTTAAGCGACAGGTTATTCGGTATTTTGAATGGG
ATCGATTATTCAGAATACAATCCCGCCACTGATAAGAGAATACCCGTGAACTTTGATATAAATTCACTGGAAAAGAAAAA
AGAAAACAAGATAGCCTTACAGAAAGAACTCGGGCTTCCCGTAATCGATGTTCCTGTCATTGGTTTGATCTCCAGATTGG
TCGAGCAAAAGGGATTCGATCTTATTGAAGCCGCTGCTGAAAAGATTCTAAGCAACGATCTTCAATTCGTTGTATTGGGA
ACAGGTGAGGAAAGATACGAAAGACTGTTCAAATCCCTGGGTGAAAGGTTCCCCGAAAAGGTCTCTGCAAACATTACCTT
CAATGTAGATCTTGCTCAAAAGATCTACGCTGGAAGTGATATGTTTTTGATGCCGTCACGCTATGAACCCTGTGGCCTGG
GGCAGATGTTCGCCATGAGATACGGAACGATTCCCGTAGTTCGCTTTACCGGTGGGCTTCGCGACACTGTAAAAGAATTC
AACCCCGAAACGCTCGAAGGAAACGGATTTGGTTTTGAGGAATACAACCCAGACAAACTCTTAGAGGCTGTTGAAAAAGC
TATCAAGATTTACGAAAACAAAACCCTGTGGAACCAACTGATGCTGAATGCAATGAATACCGATTGTTCCTGGGATAAAT
CCGCAAGAGAATACATAAAACTATACAAACATGTGTTGAATTCCGGGAGGGATATCTTGAATGCCTGA

Upstream 100 bases:

>100_bases
AAGATGAAGCCGCTAAGATAATGCTTGAGTTATTTGAAAAAGCCGATGTGGTTGTCTTCTCGCATGATTTTCCTTTATTC
AAGAATAGGAGTGATGGATA

Downstream 100 bases:

>100_bases
GCTCAGGAAAGATCCAATAATAAAAAGATGGGTAATTATAGCAACAGAAAGATCCAAAAGACCAAACGATTTTAAAAAAC
AACAGGATCAGAAAACCGAA

Product: glycogen/starch synthase, ADP-glucose type

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKILFVSYEVYPLAKVGGLADVAGSLPKYLEKEGVSVQIAMPFHKKVKADNIENTGIVITTKHLPEKYSFEIYKTPLPGS
GVPVFLFKNDQLIDSDEVYEGTDLALQAIAFSDAVVKFAETLEPDLLHVNDWQPALIPAYISAFYNGKPKTLLTIHNLGY
QGEFDKSYFYKTGLPEKLWQEGKAVKNGAFNFLKTGIVTATAISTVSPTYAKEIQTPEYGAGLDETLRALSDRLFGILNG
IDYSEYNPATDKRIPVNFDINSLEKKKENKIALQKELGLPVIDVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQFVVLG
TGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKEF
NPETLEGNGFGFEEYNPDKLLEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREYIKLYKHVLNSGRDILNA

Sequences:

>Translated_475_residues
MKILFVSYEVYPLAKVGGLADVAGSLPKYLEKEGVSVQIAMPFHKKVKADNIENTGIVITTKHLPEKYSFEIYKTPLPGS
GVPVFLFKNDQLIDSDEVYEGTDLALQAIAFSDAVVKFAETLEPDLLHVNDWQPALIPAYISAFYNGKPKTLLTIHNLGY
QGEFDKSYFYKTGLPEKLWQEGKAVKNGAFNFLKTGIVTATAISTVSPTYAKEIQTPEYGAGLDETLRALSDRLFGILNG
IDYSEYNPATDKRIPVNFDINSLEKKKENKIALQKELGLPVIDVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQFVVLG
TGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKEF
NPETLEGNGFGFEEYNPDKLLEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREYIKLYKHVLNSGRDILNA
>Mature_475_residues
MKILFVSYEVYPLAKVGGLADVAGSLPKYLEKEGVSVQIAMPFHKKVKADNIENTGIVITTKHLPEKYSFEIYKTPLPGS
GVPVFLFKNDQLIDSDEVYEGTDLALQAIAFSDAVVKFAETLEPDLLHVNDWQPALIPAYISAFYNGKPKTLLTIHNLGY
QGEFDKSYFYKTGLPEKLWQEGKAVKNGAFNFLKTGIVTATAISTVSPTYAKEIQTPEYGAGLDETLRALSDRLFGILNG
IDYSEYNPATDKRIPVNFDINSLEKKKENKIALQKELGLPVIDVPVIGLISRLVEQKGFDLIEAAAEKILSNDLQFVVLG
TGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSDMFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKEF
NPETLEGNGFGFEEYNPDKLLEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREYIKLYKHVLNSGRDILNA

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily

Homologues:

Organism=Escherichia coli, GI1789836, Length=486, Percent_Identity=34.9794238683128, Blast_Score=286, Evalue=2e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLGA_KOSOT (C5CGT4)

Other databases:

- EMBL:   CP001634
- RefSeq:   YP_002941607.1
- GeneID:   7968413
- GenomeReviews:   CP001634_GR
- KEGG:   kol:Kole_1922
- HAMAP:   MF_00484
- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534
- TIGRFAMs:   TIGR02095

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1

EC number: =2.4.1.21

Molecular weight: Translated: 53224; Mature: 53224

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: BINDING 15-15

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILFVSYEVYPLAKVGGLADVAGSLPKYLEKEGVSVQIAMPFHKKVKADNIENTGIVIT
CEEEEEEEEEEEHHHHCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCEEEE
TKHLPEKYSFEIYKTPLPGSGVPVFLFKNDQLIDSDEVYEGTDLALQAIAFSDAVVKFAE
ECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLEPDLLHVNDWQPALIPAYISAFYNGKPKTLLTIHNLGYQGEFDKSYFYKTGLPEKLWQ
HCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCCCHHHHH
EGKAVKNGAFNFLKTGIVTATAISTVSPTYAKEIQTPEYGAGLDETLRALSDRLFGILNG
CCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
IDYSEYNPATDKRIPVNFDINSLEKKKENKIALQKELGLPVIDVPVIGLISRLVEQKGFD
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHEHHHHHCCCCEEHHHHHHHHHHHHHHCCCH
LIEAAAEKILSNDLQFVVLGTGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSD
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCHHHHCCCEEEEEEHHHHHHCCCC
MFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKEFNPETLEGNGFGFEEYNPDKL
EEEECCCCCCCCCHHHHHHHHCCEEEEEECCCHHHHHHHCCCCEECCCCCCCCCCCHHHH
LEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREYIKLYKHVLNSGRDILNA
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure
MKILFVSYEVYPLAKVGGLADVAGSLPKYLEKEGVSVQIAMPFHKKVKADNIENTGIVIT
CEEEEEEEEEEEHHHHCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCEEEE
TKHLPEKYSFEIYKTPLPGSGVPVFLFKNDQLIDSDEVYEGTDLALQAIAFSDAVVKFAE
ECCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TLEPDLLHVNDWQPALIPAYISAFYNGKPKTLLTIHNLGYQGEFDKSYFYKTGLPEKLWQ
HCCCCEEEECCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCEECCCCCHHHHH
EGKAVKNGAFNFLKTGIVTATAISTVSPTYAKEIQTPEYGAGLDETLRALSDRLFGILNG
CCCHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCC
IDYSEYNPATDKRIPVNFDINSLEKKKENKIALQKELGLPVIDVPVIGLISRLVEQKGFD
CCCCCCCCCCCCEEEEECCHHHHHHHHHHHEHHHHHCCCCEEHHHHHHHHHHHHHHCCCH
LIEAAAEKILSNDLQFVVLGTGEERYERLFKSLGERFPEKVSANITFNVDLAQKIYAGSD
HHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCHHHHCCCEEEEEEHHHHHHCCCC
MFLMPSRYEPCGLGQMFAMRYGTIPVVRFTGGLRDTVKEFNPETLEGNGFGFEEYNPDKL
EEEECCCCCCCCCHHHHHHHHCCEEEEEECCCHHHHHHHCCCCEECCCCCCCCCCCHHHH
LEAVEKAIKIYENKTLWNQLMLNAMNTDCSWDKSAREYIKLYKHVLNSGRDILNA
HHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA